| Literature DB >> 29055033 |
Stephen Ph Alexander1, Jörg Striessnig2, Eamonn Kelly3, Neil V Marrion3, John A Peters4, Elena Faccenda5, Simon D Harding5, Adam J Pawson5, Joanna L Sharman5, Christopher Southan5, Jamie A Davies5.
Abstract
The Concise Guide to PHARMACOLOGY 2017/18 provides concise overviews of the key properties of nearly 1800 human drug targets with an emphasis on selective pharmacology (where available), plus links to an open access knowledgebase of drug targets and their ligands (www.guidetopharmacology.org), which provides more detailed views of target and ligand properties. Although the Concise Guide represents approximately 400 pages, the material presented is substantially reduced compared to information and links presented on the website. It provides a permanent, citable, point-in-time record that will survive database updates. The full contents of this section can be found at http://onlinelibrary.wiley.com/doi/10.1111/bph.13884/full. Voltage-gated ion channels are one of the eight major pharmacological targets into which the Guide is divided, with the others being: G protein-coupled receptors, ligand-gated ion channels, other ion channels, nuclear hormone receptors, catalytic receptors, enzymes and transporters. These are presented with nomenclature guidance and summary information on the best available pharmacological tools, alongside key references and suggestions for further reading. The landscape format of the Concise Guide is designed to facilitate comparison of related targets from material contemporary to mid-2017, and supersedes data presented in the 2015/16 and 2013/14 Concise Guides and previous Guides to Receptors and Channels. It is produced in close conjunction with the Nomenclature Committee of the Union of Basic and Clinical Pharmacology (NC-IUPHAR), therefore, providing official IUPHAR classification and nomenclature for human drug targets, where appropriate.Entities:
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Year: 2017 PMID: 29055033 PMCID: PMC5650668 DOI: 10.1111/bph.13884
Source DB: PubMed Journal: Br J Pharmacol ISSN: 0007-1188 Impact factor: 8.739
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| Activators | CatSper1 is constitutively active, weakly facilitated by membrane depolarisation, strongly augmented by intracellular alkalinisation. In human, but not mouse, spermatozoa progesterone (EC50 ∼8 nM) also potentiates the CatSper current (ICatSper) [ | – | – | – |
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| Functional Characteristics | Calcium selective ion channel (Ba2+>Ca2+≫Mg2+≫Na+); quasilinear monovalent cation current in the absence of extracellular divalent cations; alkalinization shifts the voltage‐dependence of activation towards negative potentials [V½ @ pH 6.0 = +87 mV (mouse); V½ @ pH 7.5 = +11mV (mouse) or pH 7.4 = +85 mV (human)]; required for ICatSper and male fertility (mouse and human) | Required for ICatSper and male fertility (mouse and human) | Required for ICatSper and male fertility (mouse) | Required for ICatSper and male fertility (mouse) |
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| Functional Characteristics | Organelle voltage‐gated Na+‐selective channel (Na+≫K+≫Ca2+); Required for the generation of action potential‐like long depolarization in lysosomes. Voltage‐dependence of activation is sensitive to luminal pH (determined from lysosomal recordings). | Organelle voltage‐independent Na+‐selective channel (Na+≫K+≫Ca2+). Sensitive to the levels of PI(3,5)P2. Activated by decreases in [ATP] or depletion of extracellular amino acids |
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| Functional Characteristics | Maxi KCa | SKCa | SKCa | SKCa | IKCa |
| Comments | – | The rat isoform does not form functional channels when expressed alone in cell lines. N‐ or C‐terminal chimeric constructs permit functional channels that are insensitive to | – | – | – |
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| Functional Characteristics | KNa | KNa | Sperm pH‐regulated K+ current, KSPER |
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| Ion Selectivity and Conductance | NH4
+ [62pS] > K+ [38. pS] > Tl+ [21pS] > Rb+ [15pS] (Rat) [ |
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| Functional Characteristics | Kir1.1 is weakly inwardly rectifying, as compared to classical (strong) inward rectifiers. |
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| Endogenous inhibitors | – | Intracellular | – | Intracellular |
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| Functional Characteristics | IK1 in heart, ‘strong’ inward–rectifier current | IK1in heart, ‘strong’ inward–rectifier current | IK1 in heart, ‘strong’ inward–rectifier current | IK1 in heart, ‘strong’ inward–rectifier current |
| Comments | Kir2.1 is also inhibited by intracellular polyamines | Kir2.2 is also inhibited by intracellular polyamines | Kir2.3 is also inhibited by intracellular polyamines | Kir2.4 is also inhibited by intracellular polyamines |
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| Functional Characteristics | G protein‐activated inward‐rectifier current | G protein‐activated inward‐rectifier current | G protein‐activated inward‐rectifier current | G protein‐activated inward‐rectifier current |
| Comments | Kir3.1 is also activated by G | Kir3.2 is also activated by G | Kir3.3 is also activated by G | Kir3.4 is also activated by G |
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| Functional Characteristics | Inward‐rectifier current | Inward‐rectifier current | Weakly inwardly rectifying |
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| Associated subunits | SUR1, SUR2A, SUR2B | SUR1, SUR2A, SUR2B | – |
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| Functional Characteristics | ATP‐sensitive, inward‐rectifier current | ATP‐sensitive, inward‐rectifier current | Inward‐rectifier current |
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| Functional Characteristics | Background current | Background current | Background current | Background current |
| Comments | K2P1.1 is inhibited by acid pHo external acidification with a pKa ∼ 6.7 [ | K2P2.1 is also activated by membrane stretch, heat and acid pHi [ | Knock‐out of the kcnk3 gene leads to a prolonged QT interval in mice [ | K2P4 is activated by membrane stretch [ |
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| Functional Characteristics | Background current | Unknown | Unknown | Background current |
| Comments | K2P5.1 is activated by alkaline pHo [ | – | – | K2P9.1 is also inhibited by acid pHo with a pKa of ∼ 6 [ |
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| Functional Characteristics | Background current | Does not function as a homodimer [ | Background current | Unknown | Background current | Background current | Background current |
| Comments | K2P10.1 is also activated by membrane stretch [ | – | Forms a heterodimer with K2P12 [ | – | K2P16.1 current is increased by alkaline pHo with a pKa of 7.8 [ | K2P17.1 current is increased by alkaline pHo with a pKa of 8.8 [ | A frame‐shift mutation (F139WfsX24) in the KCNK18 gene, is associated with migraine with aura in humans [ |
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| Associated subunits | Kv1.2, Kv1.4, Kv
| Kv1.1, Kv1.4, Kv
| Kv1.1, Kv1.2, Kv1.4, Kv1.6 , Kv
| Kv1.1, Kv1.2, Kv
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| Functional Characteristics | KV | KV | KV | KA |
| Comments | – | – | Resistant to dendrotoxins | Resistant to dendrotoxins |
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| Associated subunits | Kv
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| Functional Characteristics | Kv | KV | KV | KV |
| Comments | Resistant to external TEA | – | – | – |
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| Associated subunits | Kv5.1, Kv6.1‐6.4, Kv8.1‐8.2 and Kv9.1‐9.3 | Kv5.1, Kv6.1‐6.4, Kv8.1‐8.2 and Kv9.1‐9.3 | – | – | – | MiRP2 is an associated subunit for Kv3.4 |
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| Functional Characteristics | KV | – | KV | KV | KA | KA |
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| Associated subunits | KChIP 1‐4, DP66, DPP10 | KChIP 1‐4, DPP6, DPP10, Kv
| KChIP 1‐4, DPP6 and DPP10, MinK, MiRPs |
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| Functional Characteristics | KA | KA | KA |
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| Functional Characteristics | cardiac IK5 | M current as a heteromer between KV7.2 and KV7.3 | M current as heteromeric KV7.2/KV7.3 or KV7.3/KV7.5 | – | M current as heteromeric KV7.3/KV7.5 |
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| Associated subunits | minK (KCNE1) and MiRP1 (KCNE2) | minK (KCNE1) | minK (KCNE1) | minK (KCNE1) | minK (KCNE1) and MiRP2 (KCNE3) | – |
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| Functional Characteristics | cardiac IKR | – | – | – | – | – |
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| Endogenous activators | cytosolic | cytosolic | cytosolic |
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| Endogenous antagonists | cytosolic | cytosolic | cytosolic |
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| Functional Characteristics | Ca2+: (P Ca/P K ∼6) single‐channel conductance: 90 pS (50mM Ca2+), 770 pS (200 mM K+) | Ca2+: (P Ca/P K6) single‐channel conductance: 90 pS (50mM Ca2+), 720 pS (210 mM K+) | Ca2+: (P Ca/PK 6) single‐channel conductance: 140 pS (50mM Ca2+), 777 pS (250 mM K+) |
| Comments | RyR1 is also activated by depolarisation via DHP receptor, calmodulin at low cytosolic Ca2+ concentrations, CaM kinase and PKA; antagonised by calmodulin at high cytosolic Ca2+ concentrations | RyR2 is also activated by CaM kinase and PKA; antagonised by calmodulin at high cytosolic Ca2+ concentrations | RyR3 is also activated by calmodulin at low cytosolic Ca2+ concentrations; antagonised by calmodulin at high cytosolic Ca2+ concentrations |
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| Chemical activators | Isothiocyanates (covalent) and 1,4‐dihydropyridines (non‐covalent) |
| Physical activators | Cooling (<17°C) (disputed) |
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| Chemical activators | NO‐mediated cysteine S‐nitrosylation | Diacylglycerol (SAG, OAG, DOG): strongly inhibited by Ca2+/CaM once activated by DAG [ | diacylglycerols | NO‐mediated cysteine S‐nitrosylation, potentiation by extracellular protons |
| Physical activators | membrane stretch | – | – | – |
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| Functional Characteristics | It is not yet clear that TRPC1 forms a homomer. It does form heteromers with TRPC4 and TRPC5 |
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| Chemical activators | NO‐mediated cysteine S‐nitrosylation (disputed), potentiation by extracellular protons | Diacylglycerols | diacylglycerols |
| Physical activators | Membrane stretch | Membrane stretch | – |
| Endogenous activators | intracellular |
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| Physical activators | – | Heat ∼ 35°C | heat (Q10 = 7.2 between 15 ‐ 25°C; Vriens et al., 2011), hypotonic cell swelling [ |
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| Functional Characteristics | Conducts mono‐ and di‐valent cations non‐selectively, dual rectification (inward and outward) |
| TRPM31235: |
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| Other channel blockers | Intracellular nucleotides including | – | – |
| Other chemical activators | – | – | constitutively active, activated by reduction of intracellular Mg2+ |
| Physical activators | Membrane depolarization (V½ = ‐20 mV to + 60 mV dependent upon conditions) in the presence of elevated [Ca2+]i, heat (Q10 = 8.5 @ +25 mV between 15 and 25°C) | membrane depolarization (V½ = 0 to + 120 mV dependent upon conditions), heat (Q10 = 10.3 @ ‐75 mV between 15 and 25°C) | – |
| Endogenous activators | intracellular | intracellular | extracellular |
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| Comments | – | TRPM5 is not blocked by | – |
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| Physical activators | – | depolarization (V½ ∼ +50 mV at 15°C), cooling (< 22‐26°C) |
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| Activators | TRPML1Va: Constitutively active, current potentiated by extracellular acidification (equivalent to intralysosomal acidification) | TRPML2Va: Constitutively active, current potentiated by extracellular acidification (equivalent to intralysosomal acidification) | TRPML3Va: Constitutively active, current inhibited by extracellular acidification (equivalent to intralysosomal acidicification) Wild type TRPML3: Activated by Na+‐free extracellular (extracytosolic) solution and membrane depolarization, current inhibited by extracellular acidification (equivalent to intralysosomal acidicification) |
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| Functional Characteristics | TRPML1Va: | TRPML1Va: Conducts Na+; monovalent cation flux suppressed by divalent cations; inwardly rectifying | TRPML3Va: |
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| Activators | – | Calmidazolium (in primary cilia): 10 μM | – |
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| Functional Characteristics | The channel properties of TRPP1 (PKD2) have not been determined | Currents have been measured directly from primary cilia and also when expressed on plasma membranes. Primary cilia appear to contain heteromeric TRPP2 + PKD1‐L1, underlying a gently outwardly rectifying nonselective conductance (PCa/PNa ∼ 6: PKD1‐L1 is a 12 TM protein of unknown topology). Primary cilia heteromeric channels have an inward single channel conductance of 80 pS and an outward single channel conductance of 95 pS. Presumed homomeric TRPP2 channels are gently outwardly rectifying. Single channel conductance is 120 pS inward, 200 pS outward [ | – |
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| Other chemical activators | NO‐mediated cysteine S‐nitrosylation | – |
| Physical activators | depolarization (V½ ∼ 0 mV at 35°C), noxious heat (> 43°C at pH 7.4) | noxious heat (> 35°C; rodent, not human) [ |
| Endogenous activators | extracellular | – |
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| Conducts mono‐ and di‐valent cations (PCa/PNa = 0.9–2.9); dual (inward and outward) rectification; current increases upon repetitive activation by heat; translocates to cell surface in response to IGF‐1 to induce a constitutively active conductance, translocates to the cell surface in response to membrane stretch |
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| Other chemical activators | NO‐mediated cysteine S‐nitrosylation | Epoxyeicosatrieonic acids and NO‐mediated cysteine S‐nitrosylation |
| Physical activators | depolarization (V½ ∼ +80 mV, reduced to more negative values following heat stimuli), heat (23°C ‐ 39°C, temperature threshold reduces with repeated heat challenge) | Constitutively active, heat (> 24°C ‐ 32°C), mechanical stimuli |
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| Activators | constitutively active (with strong buffering of intracellular Ca2+) |
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| Functional Characteristics | L‐type calcium current: High voltage‐activated, slow voltage dependent inactivation | L‐type calcium current: High voltage‐activated, slow voltage‐dependent inactivation, rapid calcium‐dependent inactivation | L‐type calcium current: Voltage‐activated, slow voltage‐dependent inactivation, more rapid calcium‐dependent inactivation | L‐type calcium current: Moderate voltage‐activated, slow voltage‐dependent inactivation |
| Comments | – | – | Cav1.3 activates more negative potentials than Cav1.2 and is incompletely inhibited by dihydropyridine antagonists. | Cav1.4 is less sensitive to dihydropyridine antagonists than other Cav1 channels |
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| Functional Characteristics | P/Q‐type calcium current: Moderate voltage‐activated, moderate voltage‐dependent inactivation | N‐type calcium current: High voltage‐activated, moderate voltage‐dependent inactivation | R‐type calcium current: Moderate voltage‐activated, fast voltage‐dependent inactivation |
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| Functional Characteristics | T‐type calcium current: Low voltage‐activated, fast voltage‐dependent inactivation | T‐type calcium current: Low voltage‐activated, fast voltage‐dependent inactivation | T‐type calcium current: Low voltage‐activated, moderate voltage‐dependent inactivation |
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| Functional Characteristics | Activated by membrane depolarization mediating macroscopic currents with time‐, voltage‐ and pH‐dependence; outwardly rectifying; voltage dependent kinetics with relatively slow current activation sensitive to extracellular pH and temperature, relatively fast deactivation; voltage threshold for current activation determined by pH gradient (ΔpH = pHo ‐pHi) across the membrane |
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| Functional Characteristics | Activation V0.5 = ‐20 mV. Fast inactivation ( | Activation V0.5 = ‐24 mV. Fast inactivation ( | Activation V0.5 = ‐24 mV. Fast inactivation (0.8 ms) | Activation V0.5 = ‐30 mV. Fast inactivation (0.6 ms) |
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| Functional Characteristics | Activation V0.5 = ‐26 mV. Fast inactivation ( | Activation V0.5 = ‐29 mV. Fast inactivation (1 ms) | Activation V0.5 = ‐27 mV. Fast inactivation (0.5 ms) | Activation V0.5 = ‐16 mV. Inactivation (6 ms) | Activation V0.5 = ‐32 mV. Slow inactivation (16 ms) |