Literature DB >> 29045626

Primary and heterotrophic productivity relate to multikingdom diversity in a hypersaline mat.

Hans C Bernstein1,2, Colin J Brislawn1, Karl Dana3, Tobias Flores-Wentz1, Alexandra B Cory3, Sarah J Fansler1, James K Fredrickson1, James J Moran3.   

Abstract

Benthic microbial ecosystems are widespread yet knowledge gaps still remain on the relationships between the diversity of species across kingdoms and productivity. Here, we ask two fundamental questions: (i) How does species diversity relate to the rates of primary and heterotrophic productivity? (ii) How do diel variations in light-energy inputs influence productivity and microbiome diversity? To answer these questions, microbial mats from a magnesium sulfate hypersaline lake were used to establish microcosms. Both the number and relatedness between bacterial and eukaryotic taxa in the microbiome were assayed via amplicon-based sequencing of 16S and 18S rRNA genes over two diel cycles. These results correlated with biomass productivity obtained from substrate-specific 13C stable isotope tracers that enabled comparisons between primary and heterotrophic productivity. Both bacterial and eukaryotic species richness and evenness were related only to the rates of 13C-labeled glucose and acetate biomass incorporation. Interestingly, measures of these heterotrophic relationships changed from positive and negative correlations depending on carbon derived from glucose or acetate, respectively. The bacterial and eukaryotic diversity of this ecosystem is also controlled, in part, from energy constraints imposed by changing irradiance over a diel cycle. © FEMS 2017.

Entities:  

Keywords:  diversity; hypersaline; microbial mat; productivity; stable isotope

Mesh:

Substances:

Year:  2017        PMID: 29045626      PMCID: PMC5812518          DOI: 10.1093/femsec/fix121

Source DB:  PubMed          Journal:  FEMS Microbiol Ecol        ISSN: 0168-6496            Impact factor:   4.194


  24 in total

1.  Spatially tracking (13) C-labelled substrate (bicarbonate) accumulation in microbial communities using laser ablation isotope ratio mass spectrometry.

Authors:  James J Moran; Charles G Doll; Hans C Bernstein; Ryan S Renslow; Alexandra B Cory; Janine R Hutchison; Stephen R Lindemann; James K Fredrickson
Journal:  Environ Microbiol Rep       Date:  2014-10-27       Impact factor: 3.541

2.  Unexpected diversity and complexity of the Guerrero Negro hypersaline microbial mat.

Authors:  Ruth E Ley; J Kirk Harris; Joshua Wilcox; John R Spear; Scott R Miller; Brad M Bebout; Julia A Maresca; Donald A Bryant; Mitchell L Sogin; Norman R Pace
Journal:  Appl Environ Microbiol       Date:  2006-05       Impact factor: 4.792

3.  Naive Bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy.

Authors:  Qiong Wang; George M Garrity; James M Tiedje; James R Cole
Journal:  Appl Environ Microbiol       Date:  2007-06-22       Impact factor: 4.792

4.  When should species richness be energy limited, and how would we know?

Authors:  Allen H Hurlbert; James C Stegen
Journal:  Ecol Lett       Date:  2014-01-07       Impact factor: 9.492

5.  Anaerolinea thermolimosa sp. nov., Levilinea saccharolytica gen. nov., sp. nov. and Leptolinea tardivitalis gen. nov., sp. nov., novel filamentous anaerobes, and description of the new classes Anaerolineae classis nov. and Caldilineae classis nov. in the bacterial phylum Chloroflexi.

Authors:  Takeshi Yamada; Yuji Sekiguchi; Satoshi Hanada; Hiroyuki Imachi; Akiyoshi Ohashi; Hideki Harada; Yoichi Kamagata
Journal:  Int J Syst Evol Microbiol       Date:  2006-06       Impact factor: 2.747

6.  Bacterial, archaeal and eukaryotic diversity of smooth and pustular microbial mat communities in the hypersaline lagoon of Shark Bay.

Authors:  M A Allen; F Goh; B P Burns; B A Neilan
Journal:  Geobiology       Date:  2009-01       Impact factor: 4.407

7.  UCHIME improves sensitivity and speed of chimera detection.

Authors:  Robert C Edgar; Brian J Haas; Jose C Clemente; Christopher Quince; Rob Knight
Journal:  Bioinformatics       Date:  2011-06-23       Impact factor: 6.937

8.  Fast UniFrac: facilitating high-throughput phylogenetic analyses of microbial communities including analysis of pyrosequencing and PhyloChip data.

Authors:  Micah Hamady; Catherine Lozupone; Rob Knight
Journal:  ISME J       Date:  2009-08-27       Impact factor: 10.302

9.  The SILVA ribosomal RNA gene database project: improved data processing and web-based tools.

Authors:  Christian Quast; Elmar Pruesse; Pelin Yilmaz; Jan Gerken; Timmy Schweer; Pablo Yarza; Jörg Peplies; Frank Oliver Glöckner
Journal:  Nucleic Acids Res       Date:  2012-11-28       Impact factor: 16.971

10.  Phototrophic biofilm assembly in microbial-mat-derived unicyanobacterial consortia: model systems for the study of autotroph-heterotroph interactions.

Authors:  Jessica K Cole; Janine R Hutchison; Ryan S Renslow; Young-Mo Kim; William B Chrisler; Heather E Engelmann; Alice C Dohnalkova; Dehong Hu; Thomas O Metz; Jim K Fredrickson; Stephen R Lindemann
Journal:  Front Microbiol       Date:  2014-04-07       Impact factor: 5.640

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  1 in total

1.  Depthwise microbiome and isotopic profiling of a moderately saline microbial mat in a solar saltern.

Authors:  Varun Paul; Yogaraj Banerjee; Prosenjit Ghosh; Susheel Bhanu Busi
Journal:  Sci Rep       Date:  2020-11-26       Impact factor: 4.379

  1 in total

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