Literature DB >> 29034059

LCN: a random graph mixture model for community detection in functional brain networks.

Christopher Bryant1, Hongtu Zhu1, Mihye Ahn2, Joseph Ibrahim1.   

Abstract

The aim of this article is to develop a Bayesian random graph mixture model (RGMM) to detect the latent class network (LCN) structure of brain connectivity networks and estimate the parameters governing this structure. The use of conjugate priors for unknown parameters leads to efficient estimation, and a well-known nonidentifiability issue is avoided by a particular parameterization of the stochastic block model (SBM). Posterior computation proceeds via an efficient Markov Chain Monte Carlo algorithm. Simulations demonstrate that LCN outperforms several other competing methods for community detection in weighted networks, and we apply our RGMM to estimate the latent community structures in the functional resting brain networks of 185 subjects from the ADHD-200 sample. We find overlap in the estimated community structure across subjects, but also heterogeneity even within a given diagnosis group.

Entities:  

Year:  2017        PMID: 29034059      PMCID: PMC5639930          DOI: 10.4310/SII.2017.v10.n3.a1

Source DB:  PubMed          Journal:  Stat Interface        ISSN: 1938-7989            Impact factor:   0.582


  15 in total

Review 1.  Community structure in social and biological networks.

Authors:  M Girvan; M E J Newman
Journal:  Proc Natl Acad Sci U S A       Date:  2002-06-11       Impact factor: 11.205

2.  Finding and evaluating community structure in networks.

Authors:  M E J Newman; M Girvan
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2004-02-26

3.  Statistical mechanics of community detection.

Authors:  Jörg Reichardt; Stefan Bornholdt
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2006-07-18

4.  Resolution limit in community detection.

Authors:  Santo Fortunato; Marc Barthélemy
Journal:  Proc Natl Acad Sci U S A       Date:  2006-12-26       Impact factor: 11.205

5.  Stochastic blockmodels with a growing number of classes.

Authors:  D S Choi; P J Wolfe; E M Airoldi
Journal:  Biometrika       Date:  2012-04-17       Impact factor: 2.445

6.  Community detection in networks with positive and negative links.

Authors:  V A Traag; Jeroen Bruggeman
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2009-09-21

Review 7.  The big data challenges of connectomics.

Authors:  Jeff W Lichtman; Hanspeter Pfister; Nir Shavit
Journal:  Nat Neurosci       Date:  2014-10-28       Impact factor: 24.884

8.  BrainNet Viewer: a network visualization tool for human brain connectomics.

Authors:  Mingrui Xia; Jinhui Wang; Yong He
Journal:  PLoS One       Date:  2013-07-04       Impact factor: 3.240

Review 9.  Complex brain networks: graph theoretical analysis of structural and functional systems.

Authors:  Ed Bullmore; Olaf Sporns
Journal:  Nat Rev Neurosci       Date:  2009-02-04       Impact factor: 34.870

10.  Characterizing the community structure of complex networks.

Authors:  Andrea Lancichinetti; Mikko Kivelä; Jari Saramäki; Santo Fortunato
Journal:  PLoS One       Date:  2010-08-12       Impact factor: 3.240

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  1 in total

1.  Weighted Stochastic Block Models of the Human Connectome across the Life Span.

Authors:  Joshua Faskowitz; Xiaoran Yan; Xi-Nian Zuo; Olaf Sporns
Journal:  Sci Rep       Date:  2018-08-29       Impact factor: 4.379

  1 in total

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