Literature DB >> 29032270

A European HLA Isolate and Its Implications for Hematopoietic Stem Cell Transplant Donor Procurement.

Tiina Linjama1, Hans-Peter Eberhard2, Juha Peräsaari3, Carlheinz Müller2, Matti Korhonen3.   

Abstract

Europeans have often been considered a homogenous group in registry donor match predictions, but it is now evident that HLA haplotype frequencies vary across the European continent. Earlier studies have indicated that Finns in northeastern Europe have unique HLA characteristics, and the increasing availability of high-resolution registry donor data is now making more detailed comparisons possible. In the first phase of the present study, estimated HLA haplotype frequencies in stem cell donor registries of Finland and its neighbors Sweden and Russia were calculated using the algorithm of the German National Bone Marrow Donor Registry (ZKRD) and their frequencies were compared with one another and also with that of Germany. Virtual donor searches for 1492 high-resolution typed Finnish patients in the Finnish, Swedish and German registries were then performed, using individual match predictions for each registry. In the last phase, the impact of specifically Finnish-enriched HLA haplotypes on Finnish patients and the use of Finnish registry donors was assessed by analyzing 647 consecutive hematopoietic stem cell transplantation (HSCT) donor searches and 40 exported Finnish HSCTs. The Finnish HLA landscape was more homogenous than the 3 other studied populations, but also genetically distinct from them. The match predictions found a probable 10/10 match for 71%, 41%, and 31% of the Finnish patients in the German, Finnish, and Swedish registries, respectively. Thirty-four of Finland's 100 most frequent HLA haplotypes were represented with a frequency of <.0003 in Germany, and with an 8- to 3262-fold greater frequency in Finland than in Germany. Patients carrying these Finnish-enriched haplotypes were less likely to receive a matched HSCT but more likely to receive it from a domestic donor. Registry donors carrying them were more likely to donate stem cells, both nationally and internationally. The Finnish HLA isolate has a significant impact on both Finnish patients and registry donors, explaining the high use of national registry donors for Finnish patients. Haplotype frequency estimations are an important tool for small registries as well, to help optimize donor match predictions and the size of individual registries.
Copyright © 2017 The American Society for Blood and Marrow Transplantation. Published by Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Donor; Frequency; HLA; Haplotype; Registry; Unrelated

Mesh:

Substances:

Year:  2017        PMID: 29032270     DOI: 10.1016/j.bbmt.2017.10.010

Source DB:  PubMed          Journal:  Biol Blood Marrow Transplant        ISSN: 1083-8791            Impact factor:   5.742


  2 in total

1.  Revisit of Optimal Donor Number Estimation in the Hong Kong Bone Marrow Donor Registry.

Authors:  Jenny Chung Yee Ho; Stephen Kwok Fan Cheung; Zhongyi Lui; Ivan Wing Hong Tang; Wanling Yang; Patrick Ip; Cheuk Kwong Lee; Derek Middleton; Janette Siu Yin Kwok
Journal:  Front Immunol       Date:  2021-04-16       Impact factor: 7.561

2.  Blood donor biobank and HLA imputation as a resource for HLA homozygous cells for therapeutic and research use.

Authors:  Jonna Clancy; Kati Hyvärinen; Jarmo Ritari; Tiina Wahlfors; Jukka Partanen; Satu Koskela
Journal:  Stem Cell Res Ther       Date:  2022-10-09       Impact factor: 8.079

  2 in total

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