Literature DB >> 29030851

Cellular Approaches in Investigating Argonaute2-Dependent RNA Silencing.

Cai Zhang1, Joonbae Seo2, Takahisa Nakamura3,4.   

Abstract

In mammals, there are four Argonaute (Ago) family proteins that play crucial roles in RNA silencing, a process wherein microRNA (miRNA) mediates inhibition of target mRNA translation. Among the Ago proteins, Argonaute2 (Ago2) uniquely possesses an endoribonuclease (slicer) activity that is critical for the biogenesis of specific miRNAs and mRNA cleavage. This Ago2 slicer activity is required for postnatal development. Despite its important roles, there are still gaps in our understanding of the mechanistic basis of Ago2's unique functions in vivo due to a limited availability of experimental tools. In order to investigate Ago2's functions, we generated a new cellular model of Ago2-deficiency in 3T3 mouse embryonic fibroblasts (MEFs). This cell line can be used for investigating general Ago2 functions, but also for further understanding of Ago2's unique characteristics including the slicer activity, specific amino acid residues, and domains in Ago2 by reconstitution of Ago2 mutants. Here, we describe the methods for establishing Ago2-deficient MEFs and for reconstituting the MEFs with an Ago2 mutant lacking its slicer activity by means of a retrovirus-mediated gene transfer.

Entities:  

Keywords:  3T3 protocol; Ago2; Mouse embryonic fibroblast

Mesh:

Substances:

Year:  2018        PMID: 29030851      PMCID: PMC8215940          DOI: 10.1007/978-1-4939-7339-2_14

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  14 in total

1.  Argonaute2 is the catalytic engine of mammalian RNAi.

Authors:  Jidong Liu; Michelle A Carmell; Fabiola V Rivas; Carolyn G Marsden; J Michael Thomson; Ji-Joon Song; Scott M Hammond; Leemor Joshua-Tor; Gregory J Hannon
Journal:  Science       Date:  2004-07-29       Impact factor: 47.728

2.  Human RISC couples microRNA biogenesis and posttranscriptional gene silencing.

Authors:  Richard I Gregory; Thimmaiah P Chendrimada; Neil Cooch; Ramin Shiekhattar
Journal:  Cell       Date:  2005-11-03       Impact factor: 41.582

Review 3.  Argonaute proteins: functional insights and emerging roles.

Authors:  Gunter Meister
Journal:  Nat Rev Genet       Date:  2013-06-04       Impact factor: 53.242

Review 4.  Towards a molecular understanding of microRNA-mediated gene silencing.

Authors:  Stefanie Jonas; Elisa Izaurralde
Journal:  Nat Rev Genet       Date:  2015-06-16       Impact factor: 53.242

5.  A dicer-independent miRNA biogenesis pathway that requires Ago catalysis.

Authors:  Sihem Cheloufi; Camila O Dos Santos; Mark M W Chong; Gregory J Hannon
Journal:  Nature       Date:  2010-06-03       Impact factor: 49.962

6.  Structural basis for 5'-end-specific recognition of guide RNA by the A. fulgidus Piwi protein.

Authors:  Jin-Biao Ma; Yu-Ren Yuan; Gunter Meister; Yi Pei; Thomas Tuschl; Dinshaw J Patel
Journal:  Nature       Date:  2005-03-31       Impact factor: 49.962

7.  Akt-mediated phosphorylation of argonaute 2 downregulates cleavage and upregulates translational repression of MicroRNA targets.

Authors:  Shane R Horman; Maja M Janas; Claudia Litterst; Bingbing Wang; Ian J MacRae; Mary J Sever; David V Morrissey; Paul Graves; Biao Luo; Shaikamjad Umesalma; Hank H Qi; Loren J Miraglia; Carl D Novina; Anthony P Orth
Journal:  Mol Cell       Date:  2013-04-18       Impact factor: 17.970

8.  EGFR modulates microRNA maturation in response to hypoxia through phosphorylation of AGO2.

Authors:  Jia Shen; Weiya Xia; Yekaterina B Khotskaya; Longfei Huo; Kotaro Nakanishi; Seung-Oe Lim; Yi Du; Yan Wang; Wei-Chao Chang; Chung-Hsuan Chen; Jennifer L Hsu; Yun Wu; Yung Carmen Lam; Brian P James; Xiuping Liu; Chang-Gong Liu; Dinshaw J Patel; Mien-Chie Hung
Journal:  Nature       Date:  2013-05-01       Impact factor: 49.962

9.  Quantitative studies of the growth of mouse embryo cells in culture and their development into established lines.

Authors:  G J TODARO; H GREEN
Journal:  J Cell Biol       Date:  1963-05       Impact factor: 10.539

10.  Argonaute2 mediates compensatory expansion of the pancreatic β cell.

Authors:  Sudhir G Tattikota; Thomas Rathjen; Sarah J McAnulty; Hans-Hermann Wessels; Ildem Akerman; Martijn van de Bunt; Jean Hausser; Jonathan L S Esguerra; Anne Musahl; Amit K Pandey; Xintian You; Wei Chen; Pedro L Herrera; Paul R Johnson; Donal O'Carroll; Lena Eliasson; Mihaela Zavolan; Anna L Gloyn; Jorge Ferrer; Ruby Shalom-Feuerstein; Daniel Aberdam; Matthew N Poy
Journal:  Cell Metab       Date:  2013-12-19       Impact factor: 27.287

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  1 in total

1.  Hepatic Ago2-mediated RNA silencing controls energy metabolism linked to AMPK activation and obesity-associated pathophysiology.

Authors:  Cai Zhang; Joonbae Seo; Kazutoshi Murakami; Esam S B Salem; Elise Bernhard; Vishnupriya J Borra; Kwangmin Choi; Celvie L Yuan; Calvin C Chan; Xiaoting Chen; Taosheng Huang; Matthew T Weirauch; Senad Divanovic; Nathan R Qi; Hala Einakat Thomas; Carol A Mercer; Haruhiko Siomi; Takahisa Nakamura
Journal:  Nat Commun       Date:  2018-09-10       Impact factor: 14.919

  1 in total

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