Warning: Undefined array key "mm" in /www/wwwroot/www.ai-bt.com/si.php on line 10 Deprecated: trim(): Passing null to parameter #1 ($string) of type string is deprecated in /www/wwwroot/www.ai-bt.com/si.php on line 10 Beyond the bulk: disclosing the life of single microbial cells.

Literature DB >> 29029257

Beyond the bulk: disclosing the life of single microbial cells.

Katrin Rosenthal^1,2, Verena Oehling^1,2, Christian Dusny¹, Andreas Schmid¹.

Abstract

Microbial single cell analysis has led to discoveries that are beyond what can be resolved with population-based studies. It provides a pristine view of the mechanisms that organize cellular physiology, unbiased by population heterogeneity or uncontrollable environmental impacts. A holistic description of cellular functions at the single cell level requires analytical concepts beyond the miniaturization of existing technologies, defined but uncontrolled by the biological system itself. This review provides an overview of the latest advances in single cell technologies and demonstrates their potential. Opportunities and limitations of single cell microbiology are discussed using selected application-related examples. © FEMS 2017.

Entities: CellLine Chemical Disease Gene Species

Keywords: heterogeneity; lab-on-a-chip; microfluidics; single cell analysis; single cell dynamics; technical bias

Mesh：

Year: 2017 PMID： 29029257 PMCID： PMC5812503 DOI： 10.1093/femsre/fux044

Source DB: PubMed Journal: FEMS Microbiol Rev ISSN： 0168-6445 Impact factor: 16.408

301 in total

1. Bacterial persistence as a phenotypic switch.

Authors: Nathalie Q Balaban; Jack Merrin; Remy Chait; Lukasz Kowalik; Stanislas Leibler
Journal: Science Date: 2004-08-12 Impact factor: 47.728

2. Modeling and CFD simulation of nutrient distribution in picoliter bioreactors for bacterial growth studies on single-cell level.

Authors: Christoph Westerwalbesloh; Alexander Grünberger; Birgit Stute; Sophie Weber; Wolfgang Wiechert; Dietrich Kohlheyer; Eric von Lieres
Journal: Lab Chip Date: 2015-09-08 Impact factor: 6.799

3. Beyond growth rate 0.6: What drives Corynebacterium glutamicum to higher growth rates in defined medium.

Authors: Simon Unthan; Alexander Grünberger; Jan van Ooyen; Jochem Gätgens; Johanna Heinrich; Nicole Paczia; Wolfgang Wiechert; Dietrich Kohlheyer; Stephan Noack
Journal: Biotechnol Bioeng Date: 2013-09-24 Impact factor: 4.530

4. Contributions of low molecule number and chromosomal positioning to stochastic gene expression.

Authors: Attila Becskei; Benjamin B Kaufmann; Alexander van Oudenaarden
Journal: Nat Genet Date: 2005-08-07 Impact factor: 38.330

5. Swimming in circles: motion of bacteria near solid boundaries.

Authors: Eric Lauga; Willow R DiLuzio; George M Whitesides; Howard A Stone
Journal: Biophys J Date: 2005-10-20 Impact factor: 4.033

Review 6. Microfluidics expanding the frontiers of microbial ecology.

Authors: Roberto Rusconi; Melissa Garren; Roman Stocker
Journal: Annu Rev Biophys Date: 2014 Impact factor: 12.981

7. Single cell genome amplification accelerates identification of the apratoxin biosynthetic pathway from a complex microbial assemblage.

Authors: Rashel V Grindberg; Thomas Ishoey; Dumitru Brinza; Eduardo Esquenazi; R Cameron Coates; Wei-ting Liu; Lena Gerwick; Pieter C Dorrestein; Pavel Pevzner; Roger Lasken; William H Gerwick
Journal: PLoS One Date: 2011-04-12 Impact factor: 3.240

8. Evolution of stress response in the face of unreliable environmental signals.

Authors: Markus Arnoldini; Rafal Mostowy; Sebastian Bonhoeffer; Martin Ackermann
Journal: PLoS Comput Biol Date: 2012-08-16 Impact factor: 4.475

9. Analysis of fluorescent reporters indicates heterogeneity in glucose uptake and utilization in clonal bacterial populations.

Authors: Nela Nikolic; Thomas Barner; Martin Ackermann
Journal: BMC Microbiol Date: 2013-11-15 Impact factor: 3.605

10. MicrobeJ, a tool for high throughput bacterial cell detection and quantitative analysis.

Authors: Adrien Ducret; Ellen M Quardokus; Yves V Brun
Journal: Nat Microbiol Date: 2016-06-20 Impact factor: 17.745

11 in total

Review 1. Microbial phenomics linking the phenotype to function: The potential of Raman spectroscopy.

Authors: Jin-Kyung Hong; Soo Bin Kim; Eun Sun Lyou; Tae Kwon Lee
Journal: J Microbiol Date: 2021-01-26 Impact factor: 3.422

Review 2. Next-generation physiology approaches to study microbiome function at single cell level.

Authors: Roland Hatzenpichler; Viola Krukenberg; Rachel L Spietz; Zackary J Jay
Journal: Nat Rev Microbiol Date: 2020-02-13 Impact factor: 60.633

3. Combining Microscopy Assays of Bacteria-Surface Interactions To Better Evaluate Antimicrobial Polymer Coatings.

Authors: M K L N Sikosana; A Ruland; C Werner; L D Renner
Journal: Appl Environ Microbiol Date: 2022-02-02 Impact factor: 5.005

4. Analysis of population structures of the microalga Acutodesmus obliquus during lipid production using multi-dimensional single-cell analysis.

Authors: Michael Sandmann; Michaela Schafberg; Martin Lippold; Sascha Rohn
Journal: Sci Rep Date: 2018-04-19 Impact factor: 4.379

5. Dimension-reduction simplifies the analysis of signal crosstalk in a bacterial quorum sensing pathway.

Authors: Taylor Miller; Keval Patel; Coralis Rodriguez; Eric V Stabb; Stephen J Hagen
Journal: Sci Rep Date: 2021-10-05 Impact factor: 4.379

6. Droplet-based microfluidics platform for antifungal analysis against filamentous fungi.

Authors: Sehrish Iftikhar; Aurélie Vigne; Julia Elisa Sepulveda-Diaz
Journal: Sci Rep Date: 2021-11-26 Impact factor: 4.379

7. Growth-Associated Droplet Shrinkage for Bacterial Quantification, Growth Monitoring, and Separation by Ultrahigh-Throughput Microfluidics.

Authors: Émilie Geersens; Stéphane Vuilleumier; Michael Ryckelynck
Journal: ACS Omega Date: 2022-03-30