| Literature DB >> 29021993 |
David C Newitt1, Dariya Malyarenko2, Thomas L Chenevert2, C Chad Quarles3, Laura Bell3, Andriy Fedorov4, Fiona Fennessy4, Michael A Jacobs5, Meiyappan Solaiyappan5, Stefanie Hectors6, Bachir Taouli6, Mark Muzi7, Paul E Kinahan7, Kathleen M Schmainda8, Melissa A Prah8, Erin N Taber9, Christopher Kroenke9, Wei Huang9, Lori R Arlinghaus10, Thomas E Yankeelov11, Yue Cao12, Madhava Aryal12, Yi-Fen Yen13, Jayashree Kalpathy-Cramer13, Amita Shukla-Dave14, Maggie Fung15, Jiachao Liang16, Michael Boss17,18, Nola Hylton1.
Abstract
Diffusion weighted MRI has become ubiquitous in many areas of medicine, including cancer diagnosis and treatment response monitoring. Reproducibility of diffusion metrics is essential for their acceptance as quantitative biomarkers in these areas. We examined the variability in the apparent diffusion coefficient (ADC) obtained from both postprocessing software implementations utilized by the NCI Quantitative Imaging Network and online scan time-generated ADC maps. Phantom and in vivo breast studies were evaluated for two ([Formula: see text]) and four ([Formula: see text]) [Formula: see text]-value diffusion metrics. Concordance of the majority of implementations was excellent for both phantom ADC measures and in vivo [Formula: see text], with relative biases [Formula: see text] ([Formula: see text]) and [Formula: see text] (phantom [Formula: see text]) but with higher deviations in ADC at the lowest phantom ADC values. In vivo [Formula: see text] concordance was good, with typical biases of [Formula: see text] to 3% but higher for online maps. Multiple b-value ADC implementations were separated into two groups determined by the fitting algorithm. Intergroup mean ADC differences ranged from negligible for phantom data to 2.8% for [Formula: see text] in vivo data. Some higher deviations were found for individual implementations and online parametric maps. Despite generally good concordance, implementation biases in ADC measures are sometimes significant and may be large enough to be of concern in multisite studies.Entities:
Keywords: apparent diffusion coefficient; breast MRI; reproducibility
Year: 2017 PMID: 29021993 PMCID: PMC5633866 DOI: 10.1117/1.JMI.5.1.011003
Source DB: PubMed Journal: J Med Imaging (Bellingham) ISSN: 2329-4302
Dataset information for the ADC Mapping CP.
| Group label | Description | Scanner manufacturers | Output parameters | Analysis ROIs | ||
|---|---|---|---|---|---|---|
| Br2b | Two | 3 | 0, 800 | GEHC, SM, PM | Multislice tumor | |
| Br4b | Four | 4 | 0, 100, 600, 800 | GEHC, SM, PM | Multislice tumor | |
| PerfFrac | ||||||
| Ph4b | Four | 3 | 0, 500, 900, 2000 | GEHC, SM, PM | 1-cm-diameter circles, 13 vials | |
Manufacturers: General Electric Healthcare (GEHC), Siemens Medical (SM), Philips Medical (PM).
Output parameters: : monoexponential ADC using all -values; : monoexponential ADC using only highest and lowest -values; : monoexponential ADC using three highest -values; and PerfFrac: fraction of signal attributed to fast-decaying perfusion component.
An additional GEHC study with all directional DWI images but no trace images was included in Br4b.
DWI quantitative AIs included in the ADC Mapping CP.
| AI ID | Data groups | Base language or platform | AI publicly available | Parametric map format | Multi- |
|---|---|---|---|---|---|
| AI-IDL | All | IDL® | No | DICOM | NLS-GX (curvefit) |
| AI-MAT1 | Br2b, Br4b | MATLAB® | No | MATLAB® | NLS-TRF (lsqcurvefit) |
| AI-MAT2 | All | MATLAB® | No | MATLAB® | Log-linear |
| AI-3DSl1 | All | 3D Slicer DWI Module | Yes | DICOM | NLS-LM |
| AI-MAT3 | Br2b, Br4b | MATLAB® | No | MATLAB® | Log-linear (lscov) |
| AI-QIBA | Ph4b | QibaPhan1.3 | Yes | DICOM | Log-linear (lscov) |
| AI-OsX1 | All | OsiriX-ADCMap | Yes | DICOM | Log-linear |
| AI-MAT4 | Br2b, Br4b | MATLAB® | No | ANALYZE | Log-linear |
| AI-CPP | All | C++ | No | DICOM | Log-linear |
| AI-AFNI | Br2b, Ph4b | AFNI | Yes | NIfTI | NA |
| AI-MAT5 | Br4b, Ph4b | MATLAB® | No | NIfTI | Log-linear |
| AI-OsX2 | All | OsiriX-IB Diffusion | Yes | DICOM | Log-linear |
| AI-MAT6 | All | MATLAB® | No | MATLAB® | Log-linear (polyfit) |
| AI-3DSl2 | All | 3D Slicer DWI Module | Yes | NRRD | NLS-LM |
| AI-Aegis | All | Aegis (C++) | Yes | DICOM | Log-linear |
No perfusion-fraction () analysis performed on Br4b.
Multi- fitting methods: using gradient expansion, using trust-region-reflective, using Levenberg–Marquardt, and or regression of . Base software package function name is given where known.
Fig. 1Typical ROI placements for (a) breast studies and (b) phantom studies, shown on maps. (a) A single representative slice from a multislice breast tumor ROI. The ROIs were drawn referencing the high -value DWI and an accompanying DCE subtraction image. Calculated mean ADC was taken over the full multislice ROI. Phantom ROIs shown in (b) are single-slice, 1-cm-diameter circles labeled with the PVP concentration (0% to 50%) and a position subscript: , , and .
Fig. 2Concordance of two -value in vivo ADC measurements across 13 offline AIs and online scanner-generated maps. Plotted is the percent difference for each ROI mean value from the median value for that measurement for all offline AI. Eleven offline AI had essentially identical results () and thus show no offsets on the plot. The SM online ADC had a bias relative to the consensus median value.
Fig. 3In vivo four -value ROI analysis results. (a) Pairwise wCV matrix for all implementations, shown graphically from (white circles) to (fully black circles), with groups A and B indicated. (b) Percent difference from the consensus values for each of four datasets, for each implementation and online map. Mean difference in ADC between groups A and B was 2.8%. The 28% deviation on the PM online ADC was due to a DICOM header corruption problem.
Fig. 4wCV and ROI mean concordance results for the Br4b data group perfusion minimized analysis. For , (a) shows the pairwise wCV matrix with groups with indicated and (b) the corresponding data for differences in mean ROI . Group results showed smaller variations than for . For , (c, d) groups were less well defined, except for the three MATLAB® AI indicated, which were nearly identical (). The small positive biases for AI-C++ were identified as due to use of a biexponential model.
Fig. 5Percent difference from reference for Ph4b measurements for (a) GEHC, (b) SM, and (c) PM scans. The reference value for for each individual ROI is the average of the groups A and B mean values for that ROI. ROIs are ordered from highest ADC (0% PVP) to lowest ADC (50% PVP), left to right, for each AI or group. Concordance is excellent, except for a few measurements on the lowest ADC vials ().