| Literature DB >> 29016320 |
Sarah Gwyn1, Gretchen Cooley2, Brook Goodhew2, Stephan Kohlhoff3, Natalie Banniettis3, Ryan Wiegand2, Diana L Martin2.
Abstract
Antibody responses to Chlamydia trachomatis (CT) antigens may be useful tools for surveillance of trachoma by estimating cumulative prevalence of infection within a population. Data were compared from three different platforms-multiplex bead array (MBA), enzyme-linked immunosorbent assay (ELISA), and lateral flow assay (LFA)-measuring antibody responses against the CT antigen protein plasmid gene product 3 (Pgp3). Sensitivity was defined as the proportion of specimens testing antibody positive from a set of dried blood spots from Tanzanian 1-9-year olds who were positive for CT nucleic acid of all nucleic acid amplification test (NAAT)-positive individuals (N = 103). The sensitivity of the LFA could not be determined because of the use of dried blood spots for this test; this specimen type has yet to be adapted to LFA. Specificity was defined as the proportion of sera from U.S. and Bolivian 1-9-year olds that had previously tested negative by the Chlamydia microimmunofluorescence (MIF) assay testing negative to Pgp3-specific antibodies (N = 154). The sensitivity for MBA and ELISA was the same-93.2 (95% confidence interval [CI]: 88.3-98.1). Specificity ranged across platforms from 96.1 (95% CI: 91.8-98.2) to 99.4% (95% CI: 98.2-100). ELISA performance was similar regardless of whether the plates were precoated or freshly coated with antigen. Sensitivity and specificity of control panels were similar if the cutoff was determined using receiver operator curves or a finite mixture model, but the cutoffs themselves differed by approximately 0.5 OD using the different methodologies. These platforms show good sensitivity and specificity and show good agreement between tests at a population level, but indicate variability for ELISA outcomes depending on the cutoff determination methodology.Entities:
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Year: 2017 PMID: 29016320 PMCID: PMC5805053 DOI: 10.4269/ajtmh.17-0292
Source DB: PubMed Journal: Am J Trop Med Hyg ISSN: 0002-9637 Impact factor: 2.345
Sample sets used for the analyses and comparisons shown in this study
| Sample set | Analysis | ||||
|---|---|---|---|---|---|
| Sensitivity testing | Specificity testing | Platform comparison | Precoated vs. freshly coated plates—ELISA | ROC analysis | |
| Nepal samples of all ages | 0 | 0 | 424 | 424 | 0 |
| Tanzanian samples of all ages for ROC—previously classified as Pgp3 antibody-positive or negative by MBA | 0 | 0 | 0 | 66 | 66 |
| Tanzanian samples from PCR-positive children | 103 | 0 | 0 | 103 | 0 |
| MIF (+) nonendemic children | 0 | 0 | 1 | 1 | 0 |
| MIF (−) nonendemic children | 0 | 154 | 154 | 154 | 0 |
| Total | 103 | 154 | 579 | 748 | 66 |
ELISA = enzyme-linked immunofluorescence assay; MBA = multiplex bead array; MIF = microimmunofluorescence assay; PCR = polymerase chain reaction; Pgp3 = protein plasmid gene product 3; ROC = receiver operator characteristics. Each sample set is also described in the Methods Section. Note that there were some analyses that used a combination of sample sets.
Specificity of MBA, ELISA, and LFA tests measuring antibodies to the CT antigen Pgp3
| Cutoff determination | Specificity (95% CI) | Sensitivity (95% CI) | |
|---|---|---|---|
| MBA | ROC | 97.4% (94.9–100) | 93.2% (88.3–98.1) |
| ELISA (freshly coated) | ROC | 98.1% (95.9–100) | 93.2% (88.3–98.1) |
| ELISA (precoated) | ROC | 97.4% (94.9–100) | 93.2% (88.3–98.1) |
| ELISA (freshly coated) | MM | 96.1% (91.8–98.2) | 93.2% (88.3–98.1) |
| ELISA (precoated) | MM | 96.8% (92.6–98.6) | 93.2% (88.3–98.1) |
| LFA | Visual inspection of test line | 99.4% (98.2–100) | n.d. |
CI = confidence interval; CT = Chlamydia trachomatis; ELISA = enzyme-linked immunofluorescence assay; LFA = lateral flow assay; MBA = multiplex bead array; MIF = microimmunofluorescence assay; MM = mixture model; NAAT = nucleic acid amplification test; n.d. = not done; Pgp3 = protein plasmid gene product 3; ROC = receiver operator characteristic. Specificity is shown as percentage of pediatric MIF-negative samples testing negative by each assay, with 95% CIs in parentheses. Sensitivity is shown as percentage of specimens from NAAT-positive individuals testing positive by each assay, with 95% CIs in parentheses.
Figure 1.Intensity of anti-Pgp3 antibody responses of negative and positive control panels. Data shown represent antibody responses against Pgp3 measure on MBA (top panel) or ELISA (bottom panel). Each dot represents an individual specimen. Top panel shows MFI-BG on the y axis, bottom panel shows ODNorm on y axis. Negative control panel are MIF-negative sera from children in nonendemic countries (N = 154 as outlined in Table 1) and positive control panel are sera from children in trachoma-endemic regions of Tanzania with a CT-positive ocular swab (N = 103 as outlined in Table 1).
Agreement between three immunoassays measuring antibody responses against the CT antigen Pgp3
| MBA-positive ( | MBA-negative ( | ||||
|---|---|---|---|---|---|
| LFA positive (% [95% CI]) | LFA negative (% [95% CI]) | LFA positive (% [95% CI]) | LFA negative (% [95% CI]) | ||
| ELISA-fresh-ROC | Positive | 86.1 (80.9–90.1) | 0.8 (0.14–3.3) | 1.8 (0.7–4.1) | 2.1 (0.9–4.5) |
| Negative | 10.5 (7.1–15.3) | 2.5 (1.0–5.7) | 3.3 (1.7–6.0) | 92.8 (89.3–95.2) | |
| ELISA-fresh-MM | Positive | 96.2 (92.7–98.1) | 1.7 (0.5–4.6) | 3.6 (2.0–6.4) | 7.5 (5.0–11.0) |
| Negative | 0.4 (0.02–2.7) | 1.7 (0.5–4.6) | 1.5 (0.6–3.7) | 87.3 (83.2–90.6) | |
| ELISA-precoated-ROC | Positive | 82.7 (77.1–87.1) | 0.8 (0.14–3.3) | 1.2 (0.4–3.3) | 1.8 (0.7–4.1) |
| Negative | 13.9 (9.9–19.1) | 2.5 (1.0–5.7) | 3.9 (2.2–6.8) | 93.1 (89.6–95.5) | |
| ELISA-precoated-MM | Positive | 96.2 (92.7–98.1) | 1.3 (0.3–4.0) | 3.3 (1.7–6.0) | 3.9 (2.2–6.8) |
| Negative | 0.4 (0.02–2.7) | 2.1 (0.8–5.1) | 1.8 (0.7–4.1) | 91.0 (87.2–93.7) | |
CI = confidence interval; CT = Chlamydia trachomatis; ELISA = enzyme-linked immunosorbent assay; LFA = lateral flow assay; MBA = multiplex bead array; MM = fixed mixture model; Pgp3 = protein plasmid gene product 3; ROC = receiver operator characteristic. A set of 579 samples (provenance of samples detailed in Table 1) were tested for antibody responses using MBA, ELISA, and LFA. Ten samples were inconclusive on LFA and those data were excluded from analysis (final N = 569). Data shown are percentage of samples that fall into the indicated classification with 95% CIs shown in parentheses.
Figure 2.Comparison of ELISA data from plates freshly coated or precoated with Pgp3 antigen. Serum samples (N = 748) were run on Immulon H2B plates coated with Pgp3 antigen 16 hours previous (overnight, “ODNorm freshly coated”) or previously coated with antigen and dried in StabilCoat® buffer (ODNorm precoated). Left plot shows linear regression analysis of the normalized OD (ODNorm) of the same specimens run on precoated plates (x axis) and freshly coated plates (y axis). The R square value indicating goodness of fit is shown. The right panel shows a Bland–Altman plot calculating difference (ODNorm of precoated plate—ODNorm of freshly coated plate; y axis) vs. the average of the normalized OD (x axis). y axis limits are −1.5 to 1.5.
Pgp3 ELISA classification of samples using two different cutoff methodologies
| Pre-coated ELISA plates | ||
|---|---|---|
| Pos MM | Neg MM | |
| Pos ROC | 331 | 0 |
| Neg ROC | 52 | 365 |
ELISA = enzyme-linked immunosorbent assay; Pgp3 = protein plasmid gene product 3; MM = cutoff estimated using mixture model; Neg = negative classification (equal to or below the estimated cutoff threshold); Pos = positive classification (above the estimated cutoff threshold); ROC = cutoff estimated using receiver operator characteristic curve. Numbers in each box represent N per classification out of 748 samples total tested by ELISA. Top panel shows data from ELISAs using precoated plates, bottom panel shows data from ELISAs using same samples on freshly coated plates.
Figure 3.Control samples from all Pgp3 ELISA study plates. Normalized OD shown on y axis and plate number is on x axis. (A) Freshly coated plates. (B) Precoated plates. For (A) and (B), all control samples (top to bottom: 1000U, 50U, 200U, 50U, and NHS samples) are included. (C) NHS from freshly coated (circles) or precoated (red squares) plates. Vertical line indicates both a change in coating buffer for freshly coated plates and use of a new lot of precoated plates. Freshly coated plates 5, 7, and 10 failed QC and were rerun as plates 14, 15, and 16, respectively.