Literature DB >> 28994108

Value of a molecular screening program to support clinical trial enrollment in Asian cancer patients: The Integrated Molecular Analysis of Cancer (IMAC) Study.

Valerie Heong1,2, Nicholas L Syn1,2, Xiao Wen Lee1, Nur Sabrina Sapari2, Xue Qing Koh2, Zul Fazreen Adam Isa2, Joey Sy Lim2, Diana Lim3,4, Brendan Pang2,3,4, Yee Liang Thian5, Lai Kuan Ng3, Andrea L Wong1,2, Ross Andrew Soo1,2, Wei Peng Yong1,2, Cheng Ean Chee1, Soo-Chin Lee1,2, Boon-Cher Goh1,2,6, Richie Soong2,3, David S P Tan1,2,7.   

Abstract

The value of precision oncology initiatives in Asian contexts remains unresolved. Here, we review the institutional implementation of prospective molecular screening to facilitate accrual of patients into biomarker-driven clinical trials, and to explore the mutational landscape of advanced tumors occurring in a prospective cohort of Asian patients (n = 396) with diverse cancer types. Next-generation sequencing (NGS) and routine clinicopathological assays, such as immunohistochemistry, copy number analysis and in situ hybridization tests, were performed on tumor samples. Actionable biomarker results were used to identify eligibility for early-phase, biomarker-driven clinical trials. Overall, NGS was successful in 365 of 396 patients (92%), achieving a mean depth of 1,943× and coverage uniformity of 96%. The median turnaround time from sample receipt to return of genomic results was 26.0 days (IQR, 19.0-39.0 days). Reportable mutations were found in 300 of 365 patients (82%). Ninety-one percent of patients at study enrollment indicated consent to receive incidental findings and willingness to undergo genetic counseling if required. The most commonly mutated oncogenes included KRAS (19%), PIK3CA (16%), EGFR (5%), BRAF (3%) and KIT (3%); while the most frequently mutated tumor suppressor genes included TP53 (40%), SMARCB1 (12%), APC (8%), PTEN (6%) and SMAD4 (5%). Among 23 patients enrolled in genotype-matched trials, median progression-free survival was 2.9 months (IQR, 1.5-4.0 months). Nine of 20 evaluable patients (45%; 95% CI, 23.1-68.5%) derived clinical benefit, including 3 partial responses and 6 with stable disease lasting ≥ 8 weeks.
© 2017 UICC.

Entities:  

Keywords:  biomarker-driven clinical trials; next-generation sequencing; precision medicine; precision oncology; targeted therapy

Mesh:

Substances:

Year:  2017        PMID: 28994108     DOI: 10.1002/ijc.31091

Source DB:  PubMed          Journal:  Int J Cancer        ISSN: 0020-7136            Impact factor:   7.396


  5 in total

Review 1.  Molecular epidemiology of lung cancer in Iran: implications for drug development and cancer prevention.

Authors:  Zahra Fathi; Nicholas L Syn; Jian-Guo Zhou; Raheleh Roudi
Journal:  J Hum Genet       Date:  2018-04-18       Impact factor: 3.172

2.  Pan-CDK inhibition augments cisplatin lethality in nasopharyngeal carcinoma cell lines and xenograft models.

Authors:  Nicholas L Syn; Pei Li Lim; Li Ren Kong; Lingzhi Wang; Andrea Li-Ann Wong; Chwee Ming Lim; Thomas Kwok Seng Loh; Gerhard Siemeister; Boon Cher Goh; Wen-Son Hsieh
Journal:  Signal Transduct Target Ther       Date:  2018-04-13

3.  Statistical Process Control Charts for Monitoring Next-Generation Sequencing and Bioinformatics Turnaround in Precision Medicine Initiatives.

Authors:  Sneha Rajiv Jain; Wilson Sim; Cheng Han Ng; Yip Han Chin; Wen Hui Lim; Nicholas L Syn; Nur Haidah Bte Ahmad Kamal; Mehek Gupta; Valerie Heong; Xiao Wen Lee; Nur Sabrina Sapari; Xue Qing Koh; Zul Fazreen Adam Isa; Lucius Ho; Caitlin O'Hara; Arvindh Ulagapan; Shi Yu Gu; Kashyap Shroff; Rei Chern Weng; Joey S Y Lim; Diana Lim; Brendan Pang; Lai Kuan Ng; Andrea Wong; Ross Andrew Soo; Wei Peng Yong; Cheng Ean Chee; Soo-Chin Lee; Boon-Cher Goh; Richie Soong; David S P Tan
Journal:  Front Oncol       Date:  2021-09-24       Impact factor: 6.244

4.  Individualized Molecular Profiling for Allocation to Clinical Trials Singapore Study-An Asian Tertiary Cancer Center Experience.

Authors:  Amanda O L Seet; Aaron C Tan; Tira J Tan; Matthew C H Ng; David W M Tai; Justina Y C Lam; Gek San Tan; Apoorva Gogna; Chow Wei Too; Bien Soo Tan; Angela Takano; Alvin Lim; Tse Hui Lim; Soon Thye Lim; Rebecca Alexandra Dent; Mei Kim Ang; Yoon-Sim Yap; Iain B H Tan; Su Pin Choo; Chee Keong Toh; Elaine H Lim; Mohamad Farid; Anders Jacobsen Skanderup; N Gopalakrishna Iyer; Wan Teck Lim; Eng Huat Tan; Tony K H Lim; Daniel S W Tan
Journal:  JCO Precis Oncol       Date:  2021-05-18

5.  Global Implementation of Precision Oncology.

Authors:  Clinton Yam; Brigette B Y Ma; Timothy A Yap
Journal:  JCO Precis Oncol       Date:  2021-05-18
  5 in total

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