Literature DB >> 28992347

Common molecular pathogenesis of disease-related intrinsically disordered proteins revealed by NMR analysis.

Yoshiki Shigemitsu1, Hidekazu Hiroaki1.   

Abstract

Intrinsically disordered proteins (IDPs) are either completely unstructured or contain large disordered regions in their native state; they have drawn much attention in the field of molecular pathology. Some of them substantially tend to form protein self-assemblies, such as toxic or non-toxic aggregates and fibrils, and have been postulated to relate to diseases. These disease-related IDPs include Aβ(1-42) [Alzheimer's disease (AD)], Tau (AD and tauopathy), α-synuclein (Parkinson's disease) and p53 (cancer). Several studies suggest that these aggregation and/or fibril formation processes are often initiated by transient conformational changes of the IDPs prior to protein self-assembly. Interestingly, the pathological molecular processes of these IDPs share multiple common features with those of protein misfolding diseases, such as transmissible spongiform encephalopathy (PrPsc) and AL-amyloidosis (VL-domain of γ-immunoglobulin). This review provides an overview of solution NMR techniques that can help analyse the early and transient events of conformational equilibrium of IDPs and folded proteins.
© The Authors 2017. Published by Oxford University Press on behalf of the Japanese Biochemical Society. All rights reserved.

Entities:  

Keywords:  intrinsically disordered protein; local structural element; nucleation-dependent process; protein misfolding diseases; solution NMR

Mesh:

Substances:

Year:  2018        PMID: 28992347     DOI: 10.1093/jb/mvx056

Source DB:  PubMed          Journal:  J Biochem        ISSN: 0021-924X            Impact factor:   3.387


  9 in total

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Journal:  J Nutr Biochem       Date:  2018-11-14       Impact factor: 6.048

Review 2.  Control of rotation of the F1FO-ATP synthase nanomotor by an inhibitory α-helix from unfolded ε or intrinsically disordered ζ and IF1 proteins.

Authors:  Francisco Mendoza-Hoffmann; Mariel Zarco-Zavala; Raquel Ortega; José J García-Trejo
Journal:  J Bioenerg Biomembr       Date:  2018-09-28       Impact factor: 2.945

3.  Phosphorylation-Dependent Conformations of the Disordered Carboxyl-Terminus Domain in the Epidermal Growth Factor Receptor.

Authors:  Raju Regmi; Shwetha Srinivasan; Andrew P Latham; Vandna Kukshal; Weidong Cui; Bin Zhang; Ron Bose; Gabriela S Schlau-Cohen
Journal:  J Phys Chem Lett       Date:  2020-11-12       Impact factor: 6.475

4.  Wide-Line NMR Melting Diagrams, Their Thermodynamic Interpretation, and Secondary Structure Predictions for A30P and E46K α-Synuclein.

Authors:  Mónika Bokor; Eszter Házy; Ágnes Tantos
Journal:  ACS Omega       Date:  2022-05-23

5.  Presence of intrinsically disordered proteins can inhibit the nucleation phase of amyloid fibril formation of Aβ(1-42) in amino acid sequence independent manner.

Authors:  Koki Ikeda; Shota Suzuki; Yoshiki Shigemitsu; Takeshi Tenno; Natsuko Goda; Atsunori Oshima; Hidekazu Hiroaki
Journal:  Sci Rep       Date:  2020-07-23       Impact factor: 4.379

Review 6.  Fatal Attraction: The Case of Toxic Soluble Dimers of Truncated PQBP-1 Mutants in X-Linked Intellectual Disability.

Authors:  Yu Wai Chen; Shah Kamranur Rahman
Journal:  Int J Mol Sci       Date:  2021-02-24       Impact factor: 5.923

7.  Relevance of Amorphous and Amyloid-Like Aggregates of the p53 Core Domain to Loss of its DNA-Binding Activity.

Authors:  Emi Hibino; Takeshi Tenno; Hidekazu Hiroaki
Journal:  Front Mol Biosci       Date:  2022-04-26

Review 8.  Catechins as Tools to Understand the Molecular Basis of Neurodegeneration.

Authors:  Karla Martinez Pomier; Rashik Ahmed; Giuseppe Melacini
Journal:  Molecules       Date:  2020-08-06       Impact factor: 4.411

9.  An intrinsically disordered proteins community for ELIXIR.

Authors:  Norman E Davey; M Madan Babu; Martin Blackledge; Alan Bridge; Salvador Capella-Gutierrez; Zsuzsanna Dosztanyi; Rachel Drysdale; Richard J Edwards; Arne Elofsson; Isabella C Felli; Toby J Gibson; Aleksandras Gutmanas; John M Hancock; Jen Harrow; Desmond Higgins; Cy M Jeffries; Philippe Le Mercier; Balint Mészáros; Marco Necci; Cedric Notredame; Sandra Orchard; Christos A Ouzounis; Rita Pancsa; Elena Papaleo; Roberta Pierattelli; Damiano Piovesan; Vasilis J Promponas; Patrick Ruch; Gabriella Rustici; Pedro Romero; Sirarat Sarntivijai; Gary Saunders; Benjamin Schuler; Malvika Sharan; Denis C Shields; Joel L Sussman; Jonathan A Tedds; Peter Tompa; Michael Turewicz; Jiri Vondrasek; Wim F Vranken; Bonnie Ann Wallace; Kanin Wichapong; Silvio C E Tosatto
Journal:  F1000Res       Date:  2019-10-15
  9 in total

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