Literature DB >> 28992331

Role of DNA polymerase β oxidized nucleotide insertion in DNA ligation failure.

Melike Çaglayan1, Samuel H Wilson1.   

Abstract

Production of reactive oxygen and nitrogen species (ROS), such as hydrogen peroxide, superoxide and hydroxyl radicals, has been linked to cancer, and these oxidative molecules can damage DNA. Base excision repair (BER), a major repair system maintaining genome stability over a lifespan, has an important role in repairing oxidatively induced DNA damage. Failure of BER leads to toxic consequences in ROS-exposed cells, and ultimately can contribute to the pathobiology of disease. In our previous report, we demonstrated that oxidized nucleotide insertion by DNA polymerase β (pol β) impairs BER due to ligation failure and leads to formation of a cytotoxic repair intermediate. Biochemical and cytotoxic effects of ligation failure could mediate genome stability and influence cancer therapeutics. In this review, we discuss the importance of coordination between pol β and DNA ligase I during BER, and how this could be a fundamental mechanism underlying human diseases such as cancer and neurodegeneration. A summary of this work was presented in a symposium at the International Congress of Radiation Research 2015 in Kyoto, Japan. © Crown copyright 2017.

Entities:  

Keywords:  DNA ligase I; DNA polymerase β; base excision repair; genome stability; oxidative DNA damage

Mesh:

Substances:

Year:  2017        PMID: 28992331      PMCID: PMC5737452          DOI: 10.1093/jrr/rrx027

Source DB:  PubMed          Journal:  J Radiat Res        ISSN: 0449-3060            Impact factor:   2.724


  22 in total

1.  Passing the baton in base excision repair.

Authors:  S H Wilson; T A Kunkel
Journal:  Nat Struct Biol       Date:  2000-03

2.  Substrate channeling in mammalian base excision repair pathways: passing the baton.

Authors:  Rajendra Prasad; David D Shock; William A Beard; Samuel H Wilson
Journal:  J Biol Chem       Date:  2010-10-14       Impact factor: 5.157

Review 3.  Oxidant and environmental toxicant-induced effects compromise DNA ligation during base excision DNA repair.

Authors:  Melike Çağlayan; Samuel H Wilson
Journal:  DNA Repair (Amst)       Date:  2015-09-16

Review 4.  Mutagenesis and carcinogenesis caused by the oxidation of nucleic acids.

Authors:  Yusaku Nakabeppu; Kunihiko Sakumi; Katsumi Sakamoto; Daisuke Tsuchimoto; Teruhisa Tsuzuki; Yoshimichi Nakatsu
Journal:  Biol Chem       Date:  2006-04       Impact factor: 3.915

5.  Oxidized purine nucleotides, genome instability and neurodegeneration.

Authors:  Ilenia Ventura; Maria Teresa Russo; Gabriele De Luca; Margherita Bignami
Journal:  Mutat Res       Date:  2010-06-19       Impact factor: 2.433

Review 6.  Suppression of spontaneous mutagenesis in human cells by DNA base excision-repair.

Authors:  T Lindahl
Journal:  Mutat Res       Date:  2000-04       Impact factor: 2.433

7.  Mammalian abasic site base excision repair. Identification of the reaction sequence and rate-determining steps.

Authors:  D K Srivastava; B J Berg; R Prasad; J T Molina; W A Beard; A E Tomkinson; S H Wilson
Journal:  J Biol Chem       Date:  1998-08-14       Impact factor: 5.157

8.  Oxidative damage DNA: 8-oxoGua and 8-oxodG as molecular markers of cancer.

Authors:  Krzysztof Roszkowski; Wojciech Jozwicki; Piotr Blaszczyk; Anna Mucha-Malecka; Agnieszka Siomek
Journal:  Med Sci Monit       Date:  2011-06

9.  Uncovering the polymerase-induced cytotoxicity of an oxidized nucleotide.

Authors:  Bret D Freudenthal; William A Beard; Lalith Perera; David D Shock; Taejin Kim; Tamar Schlick; Samuel H Wilson
Journal:  Nature       Date:  2014-11-17       Impact factor: 49.962

Review 10.  Connecting the Dots: From DNA Damage and Repair to Aging.

Authors:  Mei-Ren Pan; Kaiyi Li; Shiaw-Yih Lin; Wen-Chun Hung
Journal:  Int J Mol Sci       Date:  2016-05-06       Impact factor: 5.923

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  5 in total

Review 1.  Interplay between DNA Polymerases and DNA Ligases: Influence on Substrate Channeling and the Fidelity of DNA Ligation.

Authors:  Melike Çağlayan
Journal:  J Mol Biol       Date:  2019-04-26       Impact factor: 5.469

2.  Pol β gap filling, DNA ligation and substrate-product channeling during base excision repair opposite oxidized 5-methylcytosine modifications.

Authors:  Melike Çağlayan
Journal:  DNA Repair (Amst)       Date:  2020-08-14

3.  DNA ligase I fidelity mediates the mutagenic ligation of pol β oxidized and mismatch nucleotide insertion products in base excision repair.

Authors:  Pradnya Kamble; Kalen Hall; Mahesh Chandak; Qun Tang; Melike Çağlayan
Journal:  J Biol Chem       Date:  2021-02-15       Impact factor: 5.157

4.  Structures of LIG1 that engage with mutagenic mismatches inserted by polβ in base excision repair.

Authors:  Qun Tang; Mitchell Gulkis; Robert McKenna; Melike Çağlayan
Journal:  Nat Commun       Date:  2022-07-05       Impact factor: 17.694

5.  The ligation of pol β mismatch insertion products governs the formation of promutagenic base excision DNA repair intermediates.

Authors:  Melike Çağlayan
Journal:  Nucleic Acids Res       Date:  2020-04-17       Impact factor: 16.971

  5 in total

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