Literature DB >> 31034893

Interplay between DNA Polymerases and DNA Ligases: Influence on Substrate Channeling and the Fidelity of DNA Ligation.

Melike Çağlayan1.   

Abstract

DNA ligases are a highly conserved group of nucleic acid enzymes that play an essential role in DNA repair, replication, and recombination. This review focuses on functional interaction between DNA polymerases and DNA ligases in the repair of single- and double-strand DNA breaks, and discusses the notion that the substrate channeling during DNA polymerase-mediated nucleotide insertion coupled to DNA ligation could be a mechanism to minimize the release of potentially mutagenic repair intermediates. Evidence suggesting that DNA ligases are essential for cell viability includes the fact that defects or insufficiency in DNA ligase are casually linked to genome instability. In the future, it may be possible to develop small molecule inhibitors of mammalian DNA ligases and/or their functional protein partners that potentiate the effects of chemotherapeutic compounds and improve cancer treatment outcomes.
Copyright © 2019 Elsevier Ltd. All rights reserved.

Entities:  

Keywords:  DNA ligase; DNA polymerase; DNA repair; genome stability; ligation failure

Year:  2019        PMID: 31034893      PMCID: PMC6557440          DOI: 10.1016/j.jmb.2019.04.028

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  139 in total

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Authors:  M R Singleton; K Håkansson; D J Timson; D B Wigley
Journal:  Structure       Date:  1999-01-15       Impact factor: 5.006

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Authors:  S H Wilson; T A Kunkel
Journal:  Nat Struct Biol       Date:  2000-03

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Authors:  K S Dickson; C M Burns; J P Richardson
Journal:  J Biol Chem       Date:  2000-05-26       Impact factor: 5.157

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Authors:  C D Mol; T Izumi; S Mitra; J A Tainer
Journal:  Nature       Date:  2000-01-27       Impact factor: 49.962

Review 5.  DNA ligases in the repair and replication of DNA.

Authors:  D J Timson; M R Singleton; D B Wigley
Journal:  Mutat Res       Date:  2000-08-30       Impact factor: 2.433

6.  DNA binding of Xrcc4 protein is associated with V(D)J recombination but not with stimulation of DNA ligase IV activity.

Authors:  M Modesti; J E Hesse; M Gellert
Journal:  EMBO J       Date:  1999-04-01       Impact factor: 11.598

Review 7.  Base excision repair of DNA in mammalian cells.

Authors:  H E Krokan; H Nilsen; F Skorpen; M Otterlei; G Slupphaug
Journal:  FEBS Lett       Date:  2000-06-30       Impact factor: 4.124

8.  Interactions of the DNA ligase IV-XRCC4 complex with DNA ends and the DNA-dependent protein kinase.

Authors:  L Chen; K Trujillo; P Sung; A E Tomkinson
Journal:  J Biol Chem       Date:  2000-08-25       Impact factor: 5.157

9.  Delayed DNA joining at 3' mismatches by human DNA ligases.

Authors:  A S Bhagwat; R J Sanderson; T Lindahl
Journal:  Nucleic Acids Res       Date:  1999-10-15       Impact factor: 16.971

10.  The type of DNA glycosylase determines the base excision repair pathway in mammalian cells.

Authors:  P Fortini; E Parlanti; O M Sidorkina; J Laval; E Dogliotti
Journal:  J Biol Chem       Date:  1999-05-21       Impact factor: 5.157

View more
  6 in total

1.  Pol β gap filling, DNA ligation and substrate-product channeling during base excision repair opposite oxidized 5-methylcytosine modifications.

Authors:  Melike Çağlayan
Journal:  DNA Repair (Amst)       Date:  2020-08-14

2.  AP-endonuclease 1 sculpts DNA through an anchoring tyrosine residue on the DNA intercalating loop.

Authors:  Nicole M Hoitsma; Amy M Whitaker; Emily C Beckwitt; Sunbok Jang; Pratul K Agarwal; Bennett Van Houten; Bret D Freudenthal
Journal:  Nucleic Acids Res       Date:  2020-07-27       Impact factor: 16.971

3.  DNA ligase I fidelity mediates the mutagenic ligation of pol β oxidized and mismatch nucleotide insertion products in base excision repair.

Authors:  Pradnya Kamble; Kalen Hall; Mahesh Chandak; Qun Tang; Melike Çağlayan
Journal:  J Biol Chem       Date:  2021-02-15       Impact factor: 5.157

4.  Replication and transcription machinery for ranaviruses: components, correlation, and functional architecture.

Authors:  Fei Ke; Xue-Dong Yu; Zi-Hao Wang; Jian-Fang Gui; Qi-Ya Zhang
Journal:  Cell Biosci       Date:  2022-01-06       Impact factor: 7.133

5.  Structures of LIG1 that engage with mutagenic mismatches inserted by polβ in base excision repair.

Authors:  Qun Tang; Mitchell Gulkis; Robert McKenna; Melike Çağlayan
Journal:  Nat Commun       Date:  2022-07-05       Impact factor: 17.694

6.  The ligation of pol β mismatch insertion products governs the formation of promutagenic base excision DNA repair intermediates.

Authors:  Melike Çağlayan
Journal:  Nucleic Acids Res       Date:  2020-04-17       Impact factor: 16.971

  6 in total

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