Literature DB >> 28986665

Investigating cell functioning by theoretical analysis of cell-to-cell variability.

Saša Svetina1,2.   

Abstract

Here we discuss cell-to-cell variability in isogenic cell populations on the basis of an analogy between the processes of vesicle self-reproduction and cell self-replication. A short review of the theoretical analysis of vesicle self-reproduction is presented to indicate that this process only occurs under the fulfillment of specific criteria: causal relations between the values of vesicle variables involved in its growth and division, and the parameters of the environment. It is shown that when division is asymmetric, both vesicle birth size and interdivision times are variable. We argue that during cell self-replication, the balance between processes of cell growth and division also relies on causal relations between the corresponding cellular variables. A possible method is suggested to unravel previously unidentified causal relations between cell variables from the relationships between their variability parameters such as the widths of their probability distributions and their correlation coefficients. The method is outlined by reviewing the results of the corresponding analysis applied to a population of red blood cells. Some novel research directions are suggested that could lead from the analysis of cell-to-cell variability to a better understanding of the organizational structure of cells and possibly also their evolutionary origin.

Keywords:  Cell lineage; Joint probability distribution; Red blood cells; Self-reproduction; Variability; Vesicles

Mesh:

Year:  2017        PMID: 28986665     DOI: 10.1007/s00249-017-1258-y

Source DB:  PubMed          Journal:  Eur Biophys J        ISSN: 0175-7571            Impact factor:   1.733


  30 in total

Review 1.  Distinguishing between stochasticity and determinism: Examples from cell cycle duration variability.

Authors:  Sivan Pearl Mizrahi; Oded Sandler; Laura Lande-Diner; Nathalie Q Balaban; Itamar Simon
Journal:  Bioessays       Date:  2015-12-02       Impact factor: 4.345

2.  Vesicle self-reproduction: the involvement of membrane hydraulic and solute permeabilities.

Authors:  B Bozic; S Svetina
Journal:  Eur Phys J E Soft Matter       Date:  2007-09-20       Impact factor: 1.890

3.  Question 7: The vesicle world: the emergence of cellular life can be related to properties specific to vesicles.

Authors:  Sasa Svetina
Journal:  Orig Life Evol Biosph       Date:  2007-06-26       Impact factor: 1.950

Review 4.  Adder and a coarse-grained approach to cell size homeostasis in bacteria.

Authors:  John T Sauls; Dongyang Li; Suckjoon Jun
Journal:  Curr Opin Cell Biol       Date:  2016-02-20       Impact factor: 8.382

5.  Non-genetic individuality: chance in the single cell.

Authors:  J L Spudich; D E Koshland
Journal:  Nature       Date:  1976-08-05       Impact factor: 49.962

6.  Accurate and independent measurement of volume and hemoglobin concentration of individual red cells by laser light scattering.

Authors:  N Mohandas; Y R Kim; D H Tycko; J Orlik; J Wyatt; W Groner
Journal:  Blood       Date:  1986-08       Impact factor: 22.113

7.  Single-cell proteomic analysis of S. cerevisiae reveals the architecture of biological noise.

Authors:  John R S Newman; Sina Ghaemmaghami; Jan Ihmels; David K Breslow; Matthew Noble; Joseph L DeRisi; Jonathan S Weissman
Journal:  Nature       Date:  2006-05-14       Impact factor: 49.962

8.  Improved classification of anemias by MCV and RDW.

Authors:  J D Bessman; P R Gilmer; F H Gardner
Journal:  Am J Clin Pathol       Date:  1983-09       Impact factor: 2.493

9.  Growth and shape transformations of giant phospholipid vesicles upon interaction with an aqueous oleic acid suspension.

Authors:  Primoz Peterlin; Vesna Arrigler; Ksenija Kogej; Sasa Svetina; Peter Walde
Journal:  Chem Phys Lipids       Date:  2009-04-02       Impact factor: 3.329

10.  Changes in the properties of normal human red blood cells during in vivo aging.

Authors:  Robert S Franco; M Estela Puchulu-Campanella; Latorya A Barber; Mary B Palascak; Clinton H Joiner; Philip S Low; Robert M Cohen
Journal:  Am J Hematol       Date:  2012-10-31       Impact factor: 10.047

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  2 in total

1.  A Model of Piezo1-Based Regulation of Red Blood Cell Volume.

Authors:  Saša Svetina; Tjaša Švelc Kebe; Bojan Božič
Journal:  Biophys J       Date:  2018-12-04       Impact factor: 4.033

2.  Regional Biophysics Conference - RBC2016.

Authors:  Mauro Dalla Serra; Alessandro Tossi
Journal:  Eur Biophys J       Date:  2017-12       Impact factor: 1.733

  2 in total

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