Literature DB >> 28983154

Hamiltonian Monte Carlo acceleration using surrogate functions with random bases.

Cheng Zhang1, Babak Shahbaba2, Hongkai Zhao1.   

Abstract

For big data analysis, high computational cost for Bayesian methods often limits their applications in practice. In recent years, there have been many attempts to improve computational efficiency of Bayesian inference. Here we propose an efficient and scalable computational technique for a state-of-the-art Markov chain Monte Carlo methods, namely, Hamiltonian Monte Carlo. The key idea is to explore and exploit the structure and regularity in parameter space for the underlying probabilistic model to construct an effective approximation of its geometric properties. To this end, we build a surrogate function to approximate the target distribution using properly chosen random bases and an efficient optimization process. The resulting method provides a flexible, scalable, and efficient sampling algorithm, which converges to the correct target distribution. We show that by choosing the basis functions and optimization process differently, our method can be related to other approaches for the construction of surrogate functions such as generalized additive models or Gaussian process models. Experiments based on simulated and real data show that our approach leads to substantially more efficient sampling algorithms compared to existing state-of-the-art methods.

Entities:  

Keywords:  Hamiltonian dynamics; Markov chain Monte Carlo; Random bases; Surrogate method

Year:  2016        PMID: 28983154      PMCID: PMC5624739          DOI: 10.1007/s11222-016-9699-1

Source DB:  PubMed          Journal:  Stat Comput        ISSN: 0960-3174            Impact factor:   2.559


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Journal:  IEEE Trans Pattern Anal Mach Intell       Date:  1984-06       Impact factor: 6.226

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Journal:  IEEE Trans Neural Netw       Date:  2006-07

3.  Wormhole Hamiltonian Monte Carlo.

Authors:  Shiwei Lan; Jeffrey Streets; Babak Shahbaba
Journal:  Proc Conf AAAI Artif Intell       Date:  2014-07-31

4.  Spherical Hamiltonian Monte Carlo for Constrained Target Distributions.

Authors:  Shiwei Lan; Bo Zhou; Babak Shahbaba
Journal:  JMLR Workshop Conf Proc       Date:  2014-06-18
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1.  Neural network gradient Hamiltonian Monte Carlo.

Authors:  Lingge Li; Andrew Holbrook; Babak Shahbaba; Pierre Baldi
Journal:  Comput Stat       Date:  2019-01-08       Impact factor: 1.000

  1 in total

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