| Literature DB >> 28983154 |
Cheng Zhang1, Babak Shahbaba2, Hongkai Zhao1.
Abstract
For big data analysis, high computational cost for Bayesian methods often limits their applications in practice. In recent years, there have been many attempts to improve computational efficiency of Bayesian inference. Here we propose an efficient and scalable computational technique for a state-of-the-art Markov chain Monte Carlo methods, namely, Hamiltonian Monte Carlo. The key idea is to explore and exploit the structure and regularity in parameter space for the underlying probabilistic model to construct an effective approximation of its geometric properties. To this end, we build a surrogate function to approximate the target distribution using properly chosen random bases and an efficient optimization process. The resulting method provides a flexible, scalable, and efficient sampling algorithm, which converges to the correct target distribution. We show that by choosing the basis functions and optimization process differently, our method can be related to other approaches for the construction of surrogate functions such as generalized additive models or Gaussian process models. Experiments based on simulated and real data show that our approach leads to substantially more efficient sampling algorithms compared to existing state-of-the-art methods.Entities:
Keywords: Hamiltonian dynamics; Markov chain Monte Carlo; Random bases; Surrogate method
Year: 2016 PMID: 28983154 PMCID: PMC5624739 DOI: 10.1007/s11222-016-9699-1
Source DB: PubMed Journal: Stat Comput ISSN: 0960-3174 Impact factor: 2.559