| Literature DB >> 28982360 |
Liu Miao1, Rui-Xing Yin2, Shuo Yang1, Feng Huang1, Wu-Xian Chen1, Xiao-Li Cao3.
Abstract
BACKGROUND: The present study was to detect the association of single nucleotide polymorphism (SNP) in the breast susceptibility gene 2 (BRCA2) and the risk of coronary artery disease (CAD) and ischemic stroke (IS).Entities:
Keywords: Breast susceptibility gene 2; Coronary artery disease; Ischemic stroke; Lipids; Single nucleotide polymorphism
Mesh:
Substances:
Year: 2017 PMID: 28982360 PMCID: PMC5629769 DOI: 10.1186/s12944-017-0584-5
Source DB: PubMed Journal: Lipids Health Dis ISSN: 1476-511X Impact factor: 3.876
Fig. 1Electrophoresis of polymerase chain reaction products of the samples. Lane M is the 100 bp marker ladder; Lanes 1–6 are samples, the 550 bp bands are the target genes
Fig. 2Genotyping of the BRCA2 rs9534275 SNP. Lane M, 100 bp marker ladder; lanes 1 and 2, TT genotype (550 bp); lanes 3 and 4, GT genotype (444- and 106-bp); lanes 5 and 6, GG genotype (444- and 106-bp)
Fig. 3A part of the nucleotide sequence of the BRCA2 rs9534275 SNP. a: TT genotype; b: GT genotype; and c: GG genotype
Comparison of demographic, lifestyle characteristics and serum lipid levels of the participants
| Characteristic | Control ( | Case |
| ||
|---|---|---|---|---|---|
| CAD ( | IS ( |
|
| ||
| Male/female | 475/172 | 447/159 | 410/159 | 0.898 | 0.606 |
| Age (years) | 61.71 ± 9.60 | 62.21 ± 10.54 | 62.85 ± 12.33 | 0.596 | 0.451 |
| Height (cm) | 155.09 ± 7.82 | 164.10 ± 6.91 | 163.73 ± 7.27 | 0.026 | 0.042 |
| Weight (kg) | 54.55 ± 9.00 | 64.62 ± 10.63 | 63.08 ± 11.06 | 0.000 | 0.000 |
| BMI (kg/m2) | 22.66 ± 3.19 | 23.93 ± 3.22 | 23.47 ± 3.49 | 0.640 | 0.531 |
| SBP (mmHg) | 127.53 ± 18.71 | 132.89 ± 23.37 | 147.24 ± 22.30 | 0.000 | 0.000 |
| DBP (mmHg) | 80.29 ± 11.30 | 79.19 ± 13.24 | 83.62 ± 12.81 | 0.023 | 0.002 |
| PP (mmHg) | 47.23 ± 13.69 | 53.69 ± 17.18 | 63.63 ± 18.08 | 0.000 | 0.000 |
| Smoking, n (%) | 257(39.7) | 272(44.9) | 247(43.4) | 0.067 | 0.200 |
| Alcohol, n (%) | 279(43.1) | 155(25.6) | 168(29.5) | 0.000 | 0.000 |
| Glu (mmol/L) | 6.18 ± 1.76 | 6.38 ± 1.41 | 6.41 ± 1.52 | 0.004 | 0.000 |
| TC (mmol/L) | 4.50 ± 0.57 | 4.55 ± 1.20 | 4.53 ± 1.15 | 0.000 | 0.000 |
| TG (mmol/L) | 1.42 ± 1.74 | 1.67 ± 1.09 | 1.71 ± 1.53 | 0.747 | 0.277 |
| HDL-C (mmol/L) | 1.90 ± 0.48 | 1.15 ± 0.33 | 1.23 ± 0.40 | 0.000 | 0.000 |
| LDL-C (mmol/L) | 2.75 ± 0.72 | 2.96 ± 0.96 | 2.93 ± 0.84 | 0.000 | 0.000 |
| Apo A1, g/L | 1.41 ± 0.27 | 1.04 ± 0.53 | 1.02 ± 0.22 | 0.229 | 0.069 |
| ApoB, g/L | 0.91 ± 0.20 | 1.10 ± 4.56 | 0.99 ± 0.24 | 0.101 | 0.203 |
| ApoA1/ApoB | 1.64 ± 0.51 | 1.21 ± 0.50 | 1.09 ± 0.37 | 0.113 | 0.216 |
SBP, Systolic blood pressure; DBP, Diastolic blood pressure; PP, Pulse pressure; Glu, Glucose; HDL-C, high-density lipoprotein cholesterol; LDL-C, low-density lipoprotein cholesterol; Apo, Apolipoprotein. TC, Total cholesterol; TG, Triglyceride; The value of triglyceride was presented as median (interquartile range), the difference between the control and CAD/IS groups was determined by the Wilcoxon-Mann-Whitney test
Genotype and allele frequencies of the BRCA2 rs9534275 SNP in cases and controls
| Genotype or allele | Control [ | CAD [ | IS [ | CAD | IS | ||
|---|---|---|---|---|---|---|---|
| OR (95% CI) |
| OR (95% CI) |
| ||||
| TT | 203 (31.4) | 150 (24.8) | 140 (24.6) | 1 | 1 | ||
| GT | 310(47.9) | 316 (52.1) | 291 (51.1) | 1.58 (1.19–2.08) | 0.365 | 1.52 (1.15–2.01) | 0.214 |
| GG | 134 (20.7) | 140 (23.1) | 138 (24.3) | 1.78 (0.82–1.91) | 0.005 | 1.85 (1.32–2.59) | 0.003 |
|
| 6.812 | 7.257 | |||||
|
| 0.033 | 0.027 | |||||
| HWE ( | 0.349 | 0.33 | 0.62 | ||||
| TT | 203 (31.4) | 150 (24.8) | 140 (24.6) | 1 | 1 | ||
| GT/GG | 444 (68.6) | 456 (75.2) | 429 (75.4) | 1.63 (1.25–2.12) | 0.004 | 1.61 (1.24–2.10) | 0.005 |
|
| 6.783 | 6.854 | |||||
|
| 0.01 | 0.009 | |||||
| T | 716 (55.3) | 616 (50.8) | 571 (50.2) | 1 | 1 | ||
| G | 578 (44.7) | 596 (49.2) | 567 (49.8) | 1.35(1.14–1.60) | 0.005 | 1.37 (1.16–1.62) | 0.002 |
|
| 5.106 | 6.462 | |||||
|
| 0.025 | 0.012 | |||||
Adjusted for sex, age, smoking, drinking, BMI, diabetes, hypertension, hyperlipidemia. CAD, coronary artery disease; IS, ischemic stroke
The risk of rs9534275 for CAD and IS according to body mass index (BMI), gender, smoking and drinking
| Factors | Genetype | CAD | IS | ||||
|---|---|---|---|---|---|---|---|
| OR (95% CI) |
|
| OR (95% CI) |
|
| ||
| BMI | |||||||
| < 24 Kg/m2 | TT GT/GG | 1 | 0.480 | 1 | 0.560 | ||
| 1.34(0.97–1.87) | 0.078 | 1.36(0.97–1.87) | 0.061 | ||||
| ≥ 24 Kg/m2 | TT | 1 | 1 | ||||
| GT/GG | 1.47(0.98–2.20) | 0.034 | 1.49(0.97–2.23) | 0.047 | |||
| Gender | |||||||
| Male | TT GT/GG | 1 | 0.053 | 1 | 0.068 | ||
| 0.90(0.61–1.23) | 0.681 | 0.97(0.73–1.34) | 0.924 | ||||
| Female | TT | 1 | 1 | ||||
| GT/GG | 4.20(2.56–4.69) | 0.072 | 3.22(2.01–5.22) | 0.064 | |||
| Smoking | |||||||
| Nonsmoker | TT | 1 | 0.350 | 1 | 0.160 | ||
| GT/GG | 1.38(0.98–1.94) | 0.068 | 1.13(0.80–1.57) | 0.492 | |||
| Smoker | TT | 1 | 1 | ||||
| GT/GG | 1.48(1.03–2.14) | 0.034 | 1.90(1.29–2.80) | 0.001 | |||
| Drinking | |||||||
| Nondrinker | TT | 1 | 0.520 | 1 | 0.093 | ||
| GT/GG | 0.73(0.64–1.12) | 0.335 | 0.87(0.68–3.73) | 0.565 | |||
| Drinker | TT | 1 | 1 | ||||
| GT/GG | 0.81(0.66–1.28) | 0.223 | 0.94(0.71–3.92) | 0.324 | |||
CAD, coronary artery disease; IS, ischemic stroke
The relative risk factors for CAD and IS
| Relatives factors | CAD | IS | ||
|---|---|---|---|---|
| OR (95%CI) |
| OR (95% CI) |
| |
| Nonsmoking | 1 | 1 | ||
| Smoking | 1.92(1.45–2.51) | 0.013 | 1.80(1.36–2.39) | 0.022 |
| Nondrinking | 1 | 1 | ||
| Drinking | 0.29(0.22–0.38) | 0.006 | 0.34(0.26–0.41) | 0.010 |
| BMI < 24Kg/m2 | 1 | 1 | ||
| BMI ≥ 24Kg/m2 | 2.07(1.62–2.65) | 0.018 | 1.47(1.14–1.90) | 0.031 |
| Rs9534275 TT | 1 | 1 | ||
| Rs9534275 GT/GG | 1.47(1.13–1.92) | 0.004 | 1.46(1.12–1.90) | 0.005 |
| Non-diabetes | 1 | 1 | ||
| Diabetes | 1.08(0.81–1.45) | 0.466 | 1.28(0.96–1.70) | 0.092 |
| Normotensive | 1 | 1 | ||
| Hypertension | 1.11(0.84–1.45) | 0.608 | 1.55(1.19–2.02) | 0.010 |
| Normal blood lipids | 1 | 1 | ||
| Hyperlipidemia | 2.48(1.87–3.29) | 0.004 | 2.18(1.64–2.90) | 0.008 |
CAD, coronary artery disease; IS, ischemic stroke
Association of the genotypes and serum lipid levels in controls and CAD and IS patients
| Genotype | n | TC (mmol/L) | TG (mmol/L) | HDL-C (mmol/L) | LDL-C (mmol/L) | ApoA1 (g/L) | ApoB (g/L) | ApoA1/ApoB |
|---|---|---|---|---|---|---|---|---|
| Control | ||||||||
| TT | 203 | 4.58 ± 0.71 | 1.53 ± 2.38 | 1.90 ± 0.52 | 2.80 ± 0.75 | 1.43 ± 0.31 | 0.91 ± 0.22 | 1.65 ± 0.54 |
| GT | 310 | 4.46 ± 0.50 | 1.37 ± 1.18 | 1.85 ± 0.42 | 2.74 ± 0.70 | 1.40 ± 0.23 | 0.90 ± 0.19 | 1.64 ± 0.51 |
| GG | 134 | 4.48 ± 0.49 | 1.38 ± 1.70 | 1.98 ± 0.54 | 2.72 ± 0.62 | 1.42 ± 0.27 | 0.91 ± 0.26 | 1.64 ± 0.46 |
|
| 0.070 | 0.580 | 0.058 | 0.530 | 0.444 | 0.629 | 0.941 | |
| TT | 203 | 4.58 ± 0.71 | 1.53 ± 2.38 | 1.90 ± 0.52 | 2.80 ± 0.75 | 1.43 ± 0.31 | 0.91 ± 0.22 | 1.65 ± 0.54 |
| GT + GG | 444 | 4.62 ± 0.49 | 1.47 ± 1.36 | 1.89 ± 0.46 | 2.75 ± 0.99 | 1.40 ± 0.25 | 0.92 ± 0.26 | 1.63 ± 0.49 |
|
| 0.072 | 0.297 | 0.786 | 0.278 | 0.283 | 0.374 | 0.729 | |
| CAD | ||||||||
| TT | 150 | 4.55 ± 1.41 | 1.66 ± 1.09 | 1.13 ± 0.30 | 2.88 ± 0.75 | 1.07 ± 0.86 | 0.90 ± 0.27 | 1.23 ± 0.48 |
| GT | 316 | 4.58 ± 2.78 | 1.70 ± 1.11 | 1.16 ± 0.34 | 2.92 ± 1.02 | 1.04 ± 0.38 | 1.63 ± 9.16 | 1.21 ± 0.52 |
| GG | 140 | 4.61 ± 3.61 | 1.64 ± 1.03 | 1.16 ± 0.36 | 3.01 ± 1.33 | 1.03 ± 0.34 | 1.54 ± 4.43 | 1.17 ± 0.50 |
|
| 0.023 | 0.834 | 0.652 | 0.710 | 0.738 | 0.043 | 0.565 | |
| TT | 150 | 4.55 ± 1.41 | 1.66 ± 1.09 | 1.13 ± 0.30 | 2.88 ± 0.75 | 1.07 ± 0.86 | 0.90 ± 0.27 | 1.23 ± 0.48 |
| GT + GG | 456 | 4.72 ± 6.38 | 1.78 ± 1.39 | 1.15 ± 0.34 | 2.95 ± 0.99 | 1.04 ± 0.37 | 1.62 ± 5.52 | 1.20 ± 0.51 |
|
| 0.018 | 0.810 | 0.356 | 0.887 | 0.443 | 0.031 | 0.548 | |
| IS | ||||||||
| TT | 140 | 4.60 ± 1.46 | 1.90 ± 2.23 | 1.26 ± 0.54 | 2.90 ± 0.87 | 1.02 ± 0.24 | 0.99 ± 0.22 | 1.12 ± 0.56 |
| GT | 291 | 4.52 ± 1.02 | 1.66 ± 1.22 | 1.21 ± 0.35 | 2.94 ± 0.83 | 1.03 ± 0.33 | 1.06 ± 0.19 | 1.09 ± 0.51 |
| GG | 138 | 4.52 ± 1.07 | 1.62 ± 1.21 | 1.24 ± 0.33 | 2.93 ± 0.84 | 1.05 ± 0.22 | 1.03 ± 0.26 | 1.09 ± 0.46 |
|
| 0.777 | 0.232 | 0.456 | 0.930 | 0.896 | 0.789 | 0.713 | |
| TT | 140 | 4.60 ± 1.46 | 1.90 ± 2.23 | 1.26 ± 0.54 | 2.90 ± 0.87 | 1.02 ± 0.24 | 0.99 ± 0.22 | 1.12 ± 0.56 |
| GT + GG | 337 | 4.58 ± 1.38 | 1.65 ± 1.39 | 1.22 ± 0.48 | 2.94 ± 0.99 | 1.06 ± 0.62 | 1.04 ± 0.26 | 1.09 ± 0.51 |
|
| 0.478 | 0.090 | 0.278 | 0.705 | 0.971 | 0.702 | 0.412 | |
Adjusted for sex, age, smoking, drinking, BMI, diabetes, hypertension, hyperlipidemia. TC, total cholesterol; TG, triglyceride; HDL-C, high-density lipoprotein cholesterol; LDL-C, low-density lipoprotein cholesterol; ApoA1, apolipoprotein A1; ApoB, apolipoprotein B