Literature DB >> 28980046

Discovery of a seventh Rpp soybean rust resistance locus in soybean accession PI 605823.

Silas P Childs1, Zachary R King1, David R Walker2,3, Donna K Harris1, Kerry F Pedley4, James W Buck5, H Roger Boerma1, Zenglu Li6.   

Abstract

KEY MESSAGE: A novel Rpp gene from PI 605823 for resistance to Phakopsora pachyrhizi was mapped on chromosome 19. Soybean rust, caused by the obligate biotrophic fungal pathogen Phakopsora pachyrhizi Syd. & P. Syd, is a disease threat to soybean production in regions of the world with mild winters. Host plant resistance conditioned by resistance to P. pachyrhizi (Rpp) genes has been found in numerous soybean accessions, and at least 10 Rpp genes or alleles have been mapped to six genetic loci. Identifying additional disease-resistance genes will facilitate development of soybean cultivars with durable resistance. PI 605823, a plant introduction from Vietnam, was previously identified as resistant to US populations of P. pachyrhizi in greenhouse and field trials. In this study, bulked segregant analysis using an F2 population derived from 'Williams 82' × PI 605823 identified a genomic region associated with resistance to P. pachyrhizi isolate GA12, which had been collected in the US State of Georgia in 2012. To further map the resistance locus, linkage mapping was carried out using single-nucleotide polymorphism markers and phenotypic data from greenhouse assays with an F2:3 population derived from Williams 82 × PI 605823 and an F4:5 population derived from '5601T' × PI 605823. A novel resistance gene, Rpp7, was mapped to a 154-kb interval (Gm19: 39,462,291-39,616,643 Glyma.Wm82.a2) on chromosome 19 that is different from the genomic locations of any previously reported Rpp genes. This new gene could be incorporated into elite breeding lines to help provide more durable resistance to soybean rust.

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Year:  2017        PMID: 28980046     DOI: 10.1007/s00122-017-2983-4

Source DB:  PubMed          Journal:  Theor Appl Genet        ISSN: 0040-5752            Impact factor:   5.699


  21 in total

1.  Identification of markers linked to disease-resistance genes by bulked segregant analysis: a rapid method to detect markers in specific genomic regions by using segregating populations.

Authors:  R W Michelmore; I Paran; R V Kesseli
Journal:  Proc Natl Acad Sci U S A       Date:  1991-11-01       Impact factor: 11.205

2.  TASSEL: software for association mapping of complex traits in diverse samples.

Authors:  Peter J Bradbury; Zhiwu Zhang; Dallas E Kroon; Terry M Casstevens; Yogesh Ramdoss; Edward S Buckler
Journal:  Bioinformatics       Date:  2007-06-22       Impact factor: 6.937

Review 3.  From Select Agent to an Established Pathogen: The Response to Phakopsora pachyrhizi (Soybean Rust) in North America.

Authors:  Heather Y Kelly; Nicholas S Dufault; David R Walker; Scott A Isard; Raymond W Schneider; Loren J Giesler; David L Wright; James J Marois; Glen L Hartman
Journal:  Phytopathology       Date:  2015-07-01       Impact factor: 4.025

4.  Identification of a second Asian soybean rust resistance gene in Hyuuga soybean.

Authors:  Mandy D Kendrick; Donna K Harris; Bo-Keun Ha; David L Hyten; Perry B Cregan; Reid D Frederick; H Roger Boerma; Kerry F Pedley
Journal:  Phytopathology       Date:  2011-05       Impact factor: 4.025

5.  Identification and mapping of resistance genes to Phakopsora pachyrhizi in soybean (Glycine max L.) accession PI 594767-A.

Authors:  G A F Rocha; D P Alves; J C Oliveira; S H Brommonschenke
Journal:  Genet Mol Res       Date:  2016-08-05

6.  Map-based cloning of the gene associated with the soybean maturity locus E3.

Authors:  Satoshi Watanabe; Rumiko Hideshima; Zhengjun Xia; Yasutaka Tsubokura; Shusei Sato; Yumi Nakamoto; Naoki Yamanaka; Ryoji Takahashi; Masao Ishimoto; Toyoaki Anai; Satoshi Tabata; Kyuya Harada
Journal:  Genetics       Date:  2009-05-27       Impact factor: 4.562

7.  A novel Phakopsora pachyrhizi resistance allele (Rpp) contributed by PI 567068A.

Authors:  Zachary R King; Donna K Harris; Kerry F Pedley; Qijian Song; Dechun Wang; Zixiang Wen; James W Buck; Zenglu Li; H Roger Boerma
Journal:  Theor Appl Genet       Date:  2015-12-24       Impact factor: 5.699

8.  Molecular mapping of two loci that confer resistance to Asian rust in soybean.

Authors:  Danielle C G Silva; Naoki Yamanaka; Rodrigo L Brogin; Carlos A A Arias; Alexandre L Nepomuceno; Antônio O Di Mauro; Selma S Pereira; Livia M Nogueira; André L L Passianotto; Ricardo V Abdelnoor
Journal:  Theor Appl Genet       Date:  2008-04-08       Impact factor: 5.699

9.  Development and evaluation of SoySNP50K, a high-density genotyping array for soybean.

Authors:  Qijian Song; David L Hyten; Gaofeng Jia; Charles V Quigley; Edward W Fickus; Randall L Nelson; Perry B Cregan
Journal:  PLoS One       Date:  2013-01-25       Impact factor: 3.240

10.  Fingerprinting Soybean Germplasm and Its Utility in Genomic Research.

Authors:  Qijian Song; David L Hyten; Gaofeng Jia; Charles V Quigley; Edward W Fickus; Randall L Nelson; Perry B Cregan
Journal:  G3 (Bethesda)       Date:  2015-07-28       Impact factor: 3.154

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  7 in total

Review 1.  Breeding for disease resistance in soybean: a global perspective.

Authors:  Feng Lin; Sushil Satish Chhapekar; Caio Canella Vieira; Marcos Paulo Da Silva; Alejandro Rojas; Dongho Lee; Nianxi Liu; Esteban Mariano Pardo; Yi-Chen Lee; Zhimin Dong; Jose Baldin Pinheiro; Leonardo Daniel Ploper; John Rupe; Pengyin Chen; Dechun Wang; Henry T Nguyen
Journal:  Theor Appl Genet       Date:  2022-07-05       Impact factor: 5.699

2.  Identification and characterization of a new soybean promoter induced by Phakopsora pachyrhizi, the causal agent of Asian soybean rust.

Authors:  L Cabre; S Peyrard; C Sirven; L Gilles; B Pelissier; S Ducerf; N Poussereau
Journal:  BMC Biotechnol       Date:  2021-03-25       Impact factor: 2.563

3.  Association Mapping of Lathyrus sativus Disease Response to Uromyces pisi Reveals Novel Loci Underlying Partial Resistance.

Authors:  Davide Coelho Martins; Diego Rubiales; Maria Carlota Vaz Patto
Journal:  Front Plant Sci       Date:  2022-03-24       Impact factor: 5.753

4.  Genomic regions associated with resistance to soybean rust (Phakopsora pachyrhizi) under field conditions in soybean germplasm accessions from Japan, Indonesia and Vietnam.

Authors:  David R Walker; Samuel C McDonald; Donna K Harris; H Roger Boerma; James W Buck; Edward J Sikora; David B Weaver; David L Wright; James J Marois; Zenglu Li
Journal:  Theor Appl Genet       Date:  2022-07-28       Impact factor: 5.574

5.  Transcriptional profile of genes involved in the production of terpenes and glyceollins in response to biotic stresses in soybean.

Authors:  Talitta Regina Parmezan; Salvador Lima Brito Júnior; Kenia de Carvalho; Moisés de Aquino; Michael Birkett; John Pickett; Estela de Oliveira Nunes; Ricardo Vilela Abdelnor; Clara Beatriz Hoffmann Campo; Francismar Corrêa Marcelino-Guimarães
Journal:  Genet Mol Biol       Date:  2020-11-06       Impact factor: 1.771

6.  Whole Genome Re-sequencing of Soybean Accession EC241780 Providing Genomic Landscape of Candidate Genes Involved in Rust Resistance.

Authors:  Milind Balkrishna Ratnaparkhe; Niharika Marmat; Giriraj Kumawat; Maranna Shivakumar; Viraj Gangadhar Kamble; Vennampally Nataraj; Shunmugiah Veluchamy Ramesh; Milind Panjabrao Deshmukh; Ajay Kumar Singh; Humira Sonah; Rupesh Kailasrao Deshmukh; Manoj Prasad; Suresh Chand; Sanjay Gupta
Journal:  Curr Genomics       Date:  2020-11       Impact factor: 2.236

7.  Untargeted Metabolomics Analysis by UHPLC-MS/MS of Soybean Plant in a Compatible Response to Phakopsora pachyrhizi Infection.

Authors:  Evandro Silva; José Perez da Graça; Carla Porto; Rodolpho Martin do Prado; Estela Nunes; Francismar Corrêa Marcelino-Guimarães; Mauricio Conrado Meyer; Eduardo Jorge Pilau
Journal:  Metabolites       Date:  2021-03-19
  7 in total

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