Literature DB >> 18392802

Molecular mapping of two loci that confer resistance to Asian rust in soybean.

Danielle C G Silva1, Naoki Yamanaka, Rodrigo L Brogin, Carlos A A Arias, Alexandre L Nepomuceno, Antônio O Di Mauro, Selma S Pereira, Livia M Nogueira, André L L Passianotto, Ricardo V Abdelnoor.   

Abstract

Asian soybean rust (ASR) is caused by the fungal pathogen Phakopsora pachyrhizi Sydow & Sydow. It was first identified in Brazil in 2001 and quickly infected soybean areas in several countries in South America. Primary efforts to combat this disease must involve the development of resistant cultivars. Four distinct genes that confer resistance against ASR have been reported: Rpp1, Rpp2, Rpp3, and Rpp4. However, no cultivar carrying any of those resistance loci has been released. The main objective of this study was to genetically map Rpp2 and Rpp4 resistance genes. Two F(2:3) populations, derived from the crosses between the resistant lines PI 230970 (Rpp2), PI 459025 (Rpp4) and the susceptible cultivar BRS 184, were used in this study. The mapping populations and parental lines were inoculated with a field isolate of P. pachyrhizi and evaluated for lesion type as resistant (RB lesions) or susceptible (TAN lesions). The mapping populations were screened with SSR markers, using the bulk segregant analysis (BSA) to expedite the identification of linked markers. Both resistance genes showed an expected segregation ratio for a dominant trait. This study allowed mapping Rpp2 and Rpp4 loci on the linkage groups J and G, respectively. The associated markers will be of great value on marker assisted selection for this trait.

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Year:  2008        PMID: 18392802     DOI: 10.1007/s00122-008-0752-0

Source DB:  PubMed          Journal:  Theor Appl Genet        ISSN: 0040-5752            Impact factor:   5.699


  10 in total

1.  A new integrated genetic linkage map of the soybean.

Authors:  Q J Song; L F Marek; R C Shoemaker; K G Lark; V C Concibido; X Delannay; J E Specht; P B Cregan
Journal:  Theor Appl Genet       Date:  2004-02-27       Impact factor: 5.699

2.  Identification of markers linked to disease-resistance genes by bulked segregant analysis: a rapid method to detect markers in specific genomic regions by using segregating populations.

Authors:  R W Michelmore; I Paran; R V Kesseli
Journal:  Proc Natl Acad Sci U S A       Date:  1991-11-01       Impact factor: 11.205

3.  A soybean transcript map: gene distribution, haplotype and single-nucleotide polymorphism analysis.

Authors:  Ik-Young Choi; David L Hyten; Lakshmi K Matukumalli; Qijian Song; Julian M Chaky; Charles V Quigley; Kevin Chase; K Gordon Lark; Robert S Reiter; Mun-Sup Yoon; Eun-Young Hwang; Seung-In Yi; Nevin D Young; Randy C Shoemaker; Curtis P van Tassell; James E Specht; Perry B Cregan
Journal:  Genetics       Date:  2007-03-04       Impact factor: 4.562

Review 4.  Clusters of resistance genes in plants evolve by divergent selection and a birth-and-death process.

Authors:  R W Michelmore; B C Meyers
Journal:  Genome Res       Date:  1998-11       Impact factor: 9.043

5.  Resistance gene analogs are conserved and clustered in soybean.

Authors:  V Kanazin; L F Marek; R C Shoemaker
Journal:  Proc Natl Acad Sci U S A       Date:  1996-10-15       Impact factor: 11.205

6.  Identification of QTLs associated with resistance to soybean cyst nematode races 2, 3 and 5 in soybean PI 90763.

Authors:  B Guo; D A Sleper; P R Arelli; J G Shannon; H T Nguyen
Journal:  Theor Appl Genet       Date:  2005-10-18       Impact factor: 5.699

7.  Genetics of resistance to wheat leaf rust.

Authors:  J A Kolmer
Journal:  Annu Rev Phytopathol       Date:  1996       Impact factor: 13.078

8.  Polymerase Chain Reaction Assays for the Detection and Discrimination of the Soybean Rust Pathogens Phakopsora pachyrhizi and P. meibomiae.

Authors:  Reid D Frederick; Christine L Snyder; Gary L Peterson; Morris R Bonde
Journal:  Phytopathology       Date:  2002-02       Impact factor: 4.025

9.  Organization, expression and evolution of a disease resistance gene cluster in soybean.

Authors:  Michelle A Graham; Laura Fredrick Marek; Randy C Shoemaker
Journal:  Genetics       Date:  2002-12       Impact factor: 4.562

10.  The Soybean Genome Database (SoyGD): a browser for display of duplicated, polyploid, regions and sequence tagged sites on the integrated physical and genetic maps of Glycine max.

Authors:  Jeffry L Shultz; Deepak Kurunam; Kay Shopinski; M Javed Iqbal; Samreen Kazi; Kimberley Zobrist; Rabia Bashir; Satsuki Yaegashi; Nagajyothi Lavu; Ahmed J Afzal; Charles R Yesudas; M Abdelmajid Kassem; Chengcang Wu; Hong Bin Zhang; Christopher D Town; Khalid Meksem; David A Lightfoot
Journal:  Nucleic Acids Res       Date:  2006-01-01       Impact factor: 16.971

  10 in total
  22 in total

1.  Genetics and mapping of adult plant rust resistance in soybean PI 587886 and PI 587880A.

Authors:  Jeffery D Ray; Wilfrido Morel; James R Smith; Reid D Frederick; Monte R Miles
Journal:  Theor Appl Genet       Date:  2009-04-26       Impact factor: 5.699

2.  Identification of a new soybean rust resistance gene in PI 567102B.

Authors:  Shuxian Li; James R Smith; Jeffery D Ray; Reid D Frederick
Journal:  Theor Appl Genet       Date:  2012-02-29       Impact factor: 5.699

Review 3.  Phakopsora pachyrhizi, the causal agent of Asian soybean rust.

Authors:  Katharina Goellner; Marco Loehrer; Caspar Langenbach; Uwe Conrath; Eckhard Koch; Ulrich Schaffrath
Journal:  Mol Plant Pathol       Date:  2010-03       Impact factor: 5.663

4.  Identification of a soybean rust resistance gene in PI 567104B.

Authors:  Min Liu; Shuxian Li; Sivakumar Swaminathan; Binod B Sahu; Leonor F Leandro; Andrea J Cardinal; Madan K Bhattacharyya; Qijian Song; David R Walker; Silvia R Cianzio
Journal:  Theor Appl Genet       Date:  2016-03-07       Impact factor: 5.699

5.  Loss of abaxial leaf epicuticular wax in Medicago truncatula irg1/palm1 mutants results in reduced spore differentiation of anthracnose and nonhost rust pathogens.

Authors:  Srinivasa Rao Uppalapati; Yasuhiro Ishiga; Vanthana Doraiswamy; Mohamed Bedair; Shipra Mittal; Jianghua Chen; Jin Nakashima; Yuhong Tang; Million Tadege; Pascal Ratet; Rujin Chen; Holger Schultheiss; Kirankumar S Mysore
Journal:  Plant Cell       Date:  2012-01-31       Impact factor: 11.277

Review 6.  Functional genomics of soybean for improvement of productivity in adverse conditions.

Authors:  Lam-Son Phan Tran; Keiichi Mochida
Journal:  Funct Integr Genomics       Date:  2010-06-27       Impact factor: 3.410

7.  Fine mapping of the Asian soybean rust resistance gene Rpp2 from soybean PI 230970.

Authors:  Neil Yu; Myungsik Kim; Zachary R King; Donna K Harris; James W Buck; Zenglu Li; Brian W Diers
Journal:  Theor Appl Genet       Date:  2014-12-12       Impact factor: 5.699

8.  Molecular mapping of soybean rust resistance in soybean accession PI 561356 and SNP haplotype analysis of the Rpp1 region in diverse germplasm.

Authors:  Ki-Seung Kim; Jair R Unfried; David L Hyten; Reid D Frederick; Glen L Hartman; Randall L Nelson; Qijian Song; Brian W Diers
Journal:  Theor Appl Genet       Date:  2012-07-27       Impact factor: 5.699

9.  A pigeonpea gene confers resistance to Asian soybean rust in soybean.

Authors:  Cintia G Kawashima; Gustavo Augusto Guimarães; Sônia Regina Nogueira; Dan MacLean; Doug R Cook; Burkhard Steuernagel; Jongmin Baek; Costas Bouyioukos; Bernardo do V A Melo; Gustavo Tristão; Jamile Camargos de Oliveira; Gilda Rauscher; Shipra Mittal; Lisa Panichelli; Karen Bacot; Ebony Johnson; Geeta Iyer; Girma Tabor; Brande B H Wulff; Eric Ward; Gregory J Rairdan; Karen E Broglie; Gusui Wu; H Peter van Esse; Jonathan D G Jones; Sérgio H Brommonschenkel
Journal:  Nat Biotechnol       Date:  2016-04-25       Impact factor: 54.908

10.  Identification and analyses of candidate genes for rpp4-mediated resistance to Asian soybean rust in soybean.

Authors:  Jenelle D F Meyer; Danielle C G Silva; Chunling Yang; Kerry F Pedley; Chunquan Zhang; Martijn van de Mortel; John H Hill; Randy C Shoemaker; Ricardo V Abdelnoor; Steven A Whitham; Michelle A Graham
Journal:  Plant Physiol       Date:  2009-02-27       Impact factor: 8.340

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