Literature DB >> 28967889

NeuBtracker-imaging neurobehavioral dynamics in freely behaving fish.

Panagiotis Symvoulidis1,2,3, Antonella Lauri1,2,3, Anca Stefanoiu4, Michele Cappetta1,2,3, Steffen Schneider3, Hongbo Jia5, Anja Stelzl1,2, Maximilian Koch1, Carlos Cruz Perez1,2, Ahne Myklatun1,2,3, Sabine Renninger6, Andriy Chmyrov1,7, Tobias Lasser4, Wolfgang Wurst2, Vasilis Ntziachristos1,7, Gil G Westmeyer1,2,3.   

Abstract

A long-standing objective in neuroscience has been to image distributed neuronal activity in freely behaving animals. Here we introduce NeuBtracker, a tracking microscope for simultaneous imaging of neuronal activity and behavior of freely swimming fluorescent reporter fish. We showcase the value of NeuBtracker for screening neurostimulants with respect to their combined neuronal and behavioral effects and for determining spontaneous and stimulus-induced spatiotemporal patterns of neuronal activation during naturalistic behavior.

Mesh:

Year:  2017        PMID: 28967889     DOI: 10.1038/nmeth.4459

Source DB:  PubMed          Journal:  Nat Methods        ISSN: 1548-7091            Impact factor:   28.547


  30 in total

1.  Brain-wide neuronal dynamics during motor adaptation in zebrafish.

Authors:  Misha B Ahrens; Jennifer M Li; Michael B Orger; Drew N Robson; Alexander F Schier; Florian Engert; Ruben Portugues
Journal:  Nature       Date:  2012-05-09       Impact factor: 49.962

2.  Whole-brain calcium imaging with cellular resolution in freely behaving Caenorhabditis elegans.

Authors:  Jeffrey P Nguyen; Frederick B Shipley; Ashley N Linder; George S Plummer; Mochi Liu; Sagar U Setru; Joshua W Shaevitz; Andrew M Leifer
Journal:  Proc Natl Acad Sci U S A       Date:  2015-12-28       Impact factor: 11.205

3.  Reconstruction of zebrafish early embryonic development by scanned light sheet microscopy.

Authors:  Philipp J Keller; Annette D Schmidt; Joachim Wittbrodt; Ernst H K Stelzer
Journal:  Science       Date:  2008-10-09       Impact factor: 47.728

4.  Real-time visualization of neuronal activity during perception.

Authors:  Akira Muto; Masamichi Ohkura; Gembu Abe; Junichi Nakai; Koichi Kawakami
Journal:  Curr Biol       Date:  2013-01-31       Impact factor: 10.834

5.  Establishment of Gal4 transgenic zebrafish lines for analysis of development of cerebellar neural circuitry.

Authors:  Miki Takeuchi; Koji Matsuda; Shingo Yamaguchi; Kazuhide Asakawa; Nobuhiko Miyasaka; Pradeep Lal; Yoshihiro Yoshihara; Akihiko Koga; Koichi Kawakami; Takashi Shimizu; Masahiko Hibi
Journal:  Dev Biol       Date:  2014-10-07       Impact factor: 3.582

6.  Stages of embryonic development of the zebrafish.

Authors:  C B Kimmel; W W Ballard; S R Kimmel; B Ullmann; T F Schilling
Journal:  Dev Dyn       Date:  1995-07       Impact factor: 3.780

7.  Role of a ubiquitously expressed receptor in the vertebrate olfactory system.

Authors:  Shannon DeMaria; Allison P Berke; Eric Van Name; Anisa Heravian; Todd Ferreira; John Ngai
Journal:  J Neurosci       Date:  2013-09-18       Impact factor: 6.167

8.  Zebrafish behavioral profiling identifies multitarget antipsychotic-like compounds.

Authors:  Giancarlo Bruni; Andrew J Rennekamp; Andrea Velenich; Matthew McCarroll; Leo Gendelev; Ethan Fertsch; Jack Taylor; Parth Lakhani; Dennis Lensen; Tama Evron; Paul J Lorello; Xi-Ping Huang; Sabine Kolczewski; Galen Carey; Barbara J Caldarone; Eric Prinssen; Bryan L Roth; Michael J Keiser; Randall T Peterson; David Kokel
Journal:  Nat Chem Biol       Date:  2016-05-30       Impact factor: 15.040

9.  Properties of the Visible Light Phototaxis and UV Avoidance Behaviors in the Larval Zebrafish.

Authors:  Drago A Guggiana-Nilo; Florian Engert
Journal:  Front Behav Neurosci       Date:  2016-08-19       Impact factor: 3.558

10.  Whole-brain activity mapping onto a zebrafish brain atlas.

Authors:  Owen Randlett; Caroline L Wee; Eva A Naumann; Onyeka Nnaemeka; David Schoppik; James E Fitzgerald; Ruben Portugues; Alix M B Lacoste; Clemens Riegler; Florian Engert; Alexander F Schier
Journal:  Nat Methods       Date:  2015-11       Impact factor: 28.547

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  14 in total

1.  Tracking microscopy enables whole-brain imaging in freely moving zebrafish.

Authors:  Olivier Thouvenin; Claire Wyart
Journal:  Nat Methods       Date:  2017-10-31       Impact factor: 28.547

Review 2.  Computational Neuroethology: A Call to Action.

Authors:  Sandeep Robert Datta; David J Anderson; Kristin Branson; Pietro Perona; Andrew Leifer
Journal:  Neuron       Date:  2019-10-09       Impact factor: 17.173

3.  Optoacoustic imaging at kilohertz volumetric frame rates.

Authors:  Ali Özbek; Xosé Luís Deán-Ben; Daniel Razansky
Journal:  Optica       Date:  2018       Impact factor: 11.104

Review 4.  Synaptic dysfunction connects autism spectrum disorder and sleep disturbances: A perspective from studies in model organisms.

Authors:  Fusun Doldur-Balli; Toshihiro Imamura; Olivia J Veatch; Naihua N Gong; Diane C Lim; Michael P Hart; Ted Abel; Matthew S Kayser; Edward S Brodkin; Allan I Pack
Journal:  Sleep Med Rev       Date:  2022-01-25       Impact factor: 11.401

Review 5.  Large-scale neural recordings call for new insights to link brain and behavior.

Authors:  Anne E Urai; Brent Doiron; Andrew M Leifer; Anne K Churchland
Journal:  Nat Neurosci       Date:  2022-01-03       Impact factor: 28.771

6.  Probabilistic Models of Larval Zebrafish Behavior Reveal Structure on Many Scales.

Authors:  Robert Evan Johnson; Scott Linderman; Thomas Panier; Caroline Lei Wee; Erin Song; Kristian Joseph Herrera; Andrew Miller; Florian Engert
Journal:  Curr Biol       Date:  2019-12-19       Impact factor: 10.834

7.  Attraction of posture and motion-trajectory elements of conspecific biological motion in medaka fish.

Authors:  Atsushi Shibai; Tsunehiro Arimoto; Tsukasa Yoshinaga; Yuta Tsuchizawa; Dashdavaa Khureltulga; Zuben P Brown; Taishi Kakizuka; Kazufumi Hosoda
Journal:  Sci Rep       Date:  2018-06-05       Impact factor: 4.379

8.  A user-friendly herbicide derived from photo-responsive supramolecular vesicles.

Authors:  Cheng Gao; Qiaoxian Huang; Qingping Lan; Yu Feng; Fan Tang; Maggie P M Hoi; Jianxiang Zhang; Simon M Y Lee; Ruibing Wang
Journal:  Nat Commun       Date:  2018-07-27       Impact factor: 14.919

9.  Microfluidic Transportation Control of Larval Zebrafish through Optomotor Regulations under a Pressure-Driven Flow.

Authors:  Bivas Panigrahi; Chia-Yuan Chen
Journal:  Micromachines (Basel)       Date:  2019-12-14       Impact factor: 2.891

10.  Whole-Brain Calcium Imaging during Physiological Vestibular Stimulation in Larval Zebrafish.

Authors:  Geoffrey Migault; Thijs L van der Plas; Hugo Trentesaux; Thomas Panier; Raphaël Candelier; Rémi Proville; Bernhard Englitz; Georges Debrégeas; Volker Bormuth
Journal:  Curr Biol       Date:  2018-11-15       Impact factor: 10.834

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