Literature DB >> 28967196

Tetrazole-Based Probes for Integrated Phenotypic Screening, Affinity-Based Proteome Profiling, and Sensitive Detection of a Cancer Biomarker.

Ke Cheng1, Jun-Seok Lee2, Piliang Hao3, Shao Q Yao4, Ke Ding1, Zhengqiu Li1.   

Abstract

Target-identification phenotypic screening has been a powerful approach in drug discovery; however, it is hindered by difficulties in identifying the underlying cellular targets. To address this challenge, we have combined phenotypic screening of a fully functionalized small-molecule library with competitive affinity-based proteome profiling to map and functionally characterize the targets of screening hits. Using this approach, we identified ANXA2, PDIA3/4, FLAD1, and NOS2 as primary cellular targets of two bioactive molecules that inhibit cancer cell proliferation. We further demonstrated that a panel of probes can label and/or image annexin A2 (a cancer biomarker) from different cancer cell lines, thus providing opportunities for potential cancer diagnosis and therapy.
© 2017 Wiley-VCH Verlag GmbH & Co. KGaA, Weinheim.

Entities:  

Keywords:  affinity-based probes; cancer biomarkers; phenotypic screening; target identification; tetrazole

Mesh:

Substances:

Year:  2017        PMID: 28967196     DOI: 10.1002/anie.201709584

Source DB:  PubMed          Journal:  Angew Chem Int Ed Engl        ISSN: 1433-7851            Impact factor:   15.336


  14 in total

Review 1.  Photocrosslinking probes for capture of carbohydrate interactions.

Authors:  Han Wu; Jennifer Kohler
Journal:  Curr Opin Chem Biol       Date:  2019-11-06       Impact factor: 8.822

Review 2.  Reactive chemistry for covalent probe and therapeutic development.

Authors:  R Justin Grams; Ku-Lung Hsu
Journal:  Trends Pharmacol Sci       Date:  2022-01-06       Impact factor: 14.819

3.  SP3-FAIMS Chemoproteomics for High-Coverage Profiling of the Human Cysteinome*.

Authors:  Tianyang Yan; Heta S Desai; Lisa M Boatner; Stephanie L Yen; Jian Cao; Maria F Palafox; Yasaman Jami-Alahmadi; Keriann M Backus
Journal:  Chembiochem       Date:  2021-02-18       Impact factor: 3.164

4.  A proteome-wide atlas of lysine-reactive chemistry.

Authors:  Mikail E Abbasov; Madeline E Kavanagh; Taka-Aki Ichu; Michael R Lazear; Yongfeng Tao; Vincent M Crowley; Christopher W Am Ende; Stephan M Hacker; Jordan Ho; Melissa M Dix; Radu Suciu; Matthew M Hayward; Laura L Kiessling; Benjamin F Cravatt
Journal:  Nat Chem       Date:  2021-09-09       Impact factor: 24.274

5.  FLAD1 is up-regulated in Gastric Cancer and is a potential prediction of prognosis.

Authors:  Pan Hu; Yuhang Pan; Chenyang Wang; Wenhui Zhang; He Huang; Jiani Wang; Nana Zhang
Journal:  Int J Med Sci       Date:  2020-07-06       Impact factor: 3.738

6.  Light-Activatable, 2,5-Disubstituted Tetrazoles for the Proteome-wide Profiling of Aspartates and Glutamates in Living Bacteria.

Authors:  Kathrin Bach; Bert L H Beerkens; Patrick R A Zanon; Stephan M Hacker
Journal:  ACS Cent Sci       Date:  2020-04-13       Impact factor: 14.553

Review 7.  Modular Approaches to Synthesize Activity- and Affinity-Based Chemical Probes.

Authors:  Antonie J van der Zouwen; Martin D Witte
Journal:  Front Chem       Date:  2021-04-15       Impact factor: 5.221

8.  Multiplexed CuAAC Suzuki-Miyaura Labeling for Tandem Activity-Based Chemoproteomic Profiling.

Authors:  Jian Cao; Lisa M Boatner; Heta S Desai; Nikolas R Burton; Ernest Armenta; Neil J Chan; José O Castellón; Keriann M Backus
Journal:  Anal Chem       Date:  2021-01-20       Impact factor: 6.986

9.  Metal-free C-C bond formation via coupling of nitrile imines and boronic acids.

Authors:  Keith Livingstone; Sophie Bertrand; Jenna Mowat; Craig Jamieson
Journal:  Chem Sci       Date:  2019-09-27       Impact factor: 9.825

10.  Celastrol exerts a neuroprotective effect by directly binding to HMGB1 protein in cerebral ischemia-reperfusion.

Authors:  Dan-Dan Liu; Piao Luo; Liwei Gu; Qian Zhang; Peng Gao; Yongping Zhu; Xiao Chen; Qiuyan Guo; Junzhe Zhang; Nan Ma; Jigang Wang
Journal:  J Neuroinflammation       Date:  2021-08-09       Impact factor: 8.322

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