Literature DB >> 28961939

An Evolutionary Genomic Perspective on the Breeding of Dwarf Chickens.

Ming-Shan Wang1,2, Newton O Otecko1,2, Sheng Wang3, Dong-Dong Wu1,2, Min-Min Yang1, Yi-Long Xu4, Robert W Murphy1,5, Min-Sheng Peng1,2, Ya-Ping Zhang1,2,6.   

Abstract

The evolutionary history for dwarfism in chickens remains an enigma. Herein, we explore the evolution of the Serama, the smallest breed of chicken. Leveraging comparative population genomics, analyses identify several genes that are potentially associated with the growth and development of bones and muscles. These genes, and in particular both POU1F1 and IGF1, are under strong positive selection. Three allopatric dwarf bantams (Serama, Yuanbao, and Daweishan) with different breeding-histories, form distinct clusters and exhibit unique population structures. Parallel genetic mechanisms underlay their variation in body size. These findings provide insights into the multiple and complex pathways, depending on genomic variation, that chicken can take in response to aviculture selection for dwarfism.
© The Author 2017. Published by Oxford University Press on behalf of the Society for Molecular Biology and Evolution. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.

Entities:  

Keywords:  Serama; body size; chicken; dwarf; genome; selection

Mesh:

Year:  2017        PMID: 28961939     DOI: 10.1093/molbev/msx227

Source DB:  PubMed          Journal:  Mol Biol Evol        ISSN: 0737-4038            Impact factor:   16.240


  9 in total

1.  Genome-wide scan for selection signatures and genes related to heat tolerance in domestic chickens in the tropical and temperate regions in Asia.

Authors:  Xing Guo; Chao-Hui Xing; Wei Wei; Xue-Fang Zhang; Zheng-Yu Wei; Lei-Lei Ren; Jin-Jin Jiang; Min Li; Jiang-Xian Wang; Xin-Xin He; Ming-Shan Wang; Run-Shen Jiang
Journal:  Poult Sci       Date:  2022-03-07       Impact factor: 4.014

2.  863 genomes reveal the origin and domestication of chicken.

Authors:  Ming-Shan Wang; Mukesh Thakur; Min-Sheng Peng; Yu Jiang; Laurent Alain François Frantz; Ming Li; Jin-Jin Zhang; Sheng Wang; Joris Peters; Newton Otieno Otecko; Chatmongkon Suwannapoom; Xing Guo; Zhu-Qing Zheng; Ali Esmailizadeh; Nalini Yasoda Hirimuthugoda; Hidayat Ashari; Sri Suladari; Moch Syamsul Arifin Zein; Szilvia Kusza; Saeed Sohrabi; Hamed Kharrati-Koopaee; Quan-Kuan Shen; Lin Zeng; Min-Min Yang; Ya-Jiang Wu; Xing-Yan Yang; Xue-Mei Lu; Xin-Zheng Jia; Qing-Hua Nie; Susan Joy Lamont; Emiliano Lasagna; Simone Ceccobelli; Humpita Gamaralalage Thilini Nisanka Gunwardana; Thilina Madusanka Senasige; Shao-Hong Feng; Jing-Fang Si; Hao Zhang; Jie-Qiong Jin; Ming-Li Li; Yan-Hu Liu; Hong-Man Chen; Cheng Ma; Shan-Shan Dai; Abul Kashem Fazlul Haque Bhuiyan; Muhammad Sajjad Khan; Gamamada Liyanage Lalanie Pradeepa Silva; Thi-Thuy Le; Okeyo Ally Mwai; Mohamed Nawaz Mohamed Ibrahim; Megan Supple; Beth Shapiro; Olivier Hanotte; Guojie Zhang; Greger Larson; Jian-Lin Han; Dong-Dong Wu; Ya-Ping Zhang
Journal:  Cell Res       Date:  2020-06-25       Impact factor: 25.617

3.  Genome-wide genetic structure and selection signatures for color in 10 traditional Chinese yellow-feathered chicken breeds.

Authors:  Xunhe Huang; Newton O Otecko; Minsheng Peng; Zhuoxian Weng; Weina Li; Jiebo Chen; Ming Zhong; Fusheng Zhong; Sihua Jin; Zhaoyu Geng; Wei Luo; Danlin He; Cheng Ma; Jianlin Han; Sheila C Ommeh; Yaping Zhang; Xiquan Zhang; Bingwang Du
Journal:  BMC Genomics       Date:  2020-04-20       Impact factor: 3.969

4.  Assessment the effect of genomic selection and detection of selective signature in broilers.

Authors:  Xiaodong Tan; Ranran Liu; Wei Li; Maiqing Zheng; Dan Zhu; Dawei Liu; Furong Feng; Qinghe Li; Li Liu; Jie Wen; Guiping Zhao
Journal:  Poult Sci       Date:  2022-03-12       Impact factor: 4.014

5.  Correction: A genome-wide scan to identify signatures of selection in two Iranian indigenous chicken ecotypes.

Authors:  Elaheh Rostamzadeh Mahdabi; Ali Esmailizadeh; Ahmad Ayatollahi Mehrgardi; Masood Asadi Fozi
Journal:  Genet Sel Evol       Date:  2022-04-19       Impact factor: 4.297

6.  Analysis of genome and methylation changes in Chinese indigenous chickens over time provides insight into species conservation.

Authors:  Tao Zeng; Jianmei Yin; Peishi Feng; Feiran Han; Yong Tian; Yuntong Wang; Tiantian Gu; Yuhui Xu; Yali Liu; Guohui Li; Liang Qu; Li Chen; Lihong Gu; Wenwu Xu; Qian Xue; Qingyu Wei; Yongqing Cao; Peifeng Li; Huiyong Zhang; Guoqin Li; Lijun Liu; Chenghao Zhou; Zhengrong Tao; Junda Shen; Wei Han; Lizhi Lu
Journal:  Commun Biol       Date:  2022-09-12

7.  Assessing genetic architecture and signatures of selection of dual purpose Gir cattle populations using genomic information.

Authors:  Amanda Marchi Maiorano; Daniela Lino Lourenco; Shogo Tsuruta; Alejandra Maria Toro Ospina; Nedenia Bonvino Stafuzza; Yutaka Masuda; Anibal Eugenio Vercesi Filho; Joslaine Noely Dos Santos Goncalves Cyrillo; Rogério Abdallah Curi; Josineudson Augusto Ii de Vasconcelos Silva
Journal:  PLoS One       Date:  2018-08-02       Impact factor: 3.240

8.  Whole-genome resequencing infers genomic basis of giant phenotype in Siamese fighting fish ( Betta splendens).

Authors:  Le Wang; Fei Sun; May Lee; Gen-Hua Yue
Journal:  Zool Res       Date:  2022-01-18

9.  Large-scale genomic analysis reveals the genetic cost of chicken domestication.

Authors:  Ming-Shan Wang; Jin-Jin Zhang; Xing Guo; Ming Li; Rachel Meyer; Hidayat Ashari; Zhu-Qing Zheng; Sheng Wang; Min-Sheng Peng; Yu Jiang; Mukesh Thakur; Chatmongkon Suwannapoom; Ali Esmailizadeh; Nalini Yasoda Hirimuthugoda; Moch Syamsul Arifin Zein; Szilvia Kusza; Hamed Kharrati-Koopaee; Lin Zeng; Yun-Mei Wang; Ting-Ting Yin; Min-Min Yang; Ming-Li Li; Xue-Mei Lu; Emiliano Lasagna; Simone Ceccobelli; Humpita Gamaralalage Thilini Nisanka Gunwardana; Thilina Madusanka Senasig; Shao-Hong Feng; Hao Zhang; Abul Kashem Fazlul Haque Bhuiyan; Muhammad Sajjad Khan; Gamamada Liyanage Lalanie Pradeepa Silva; Le Thi Thuy; Okeyo A Mwai; Mohamed Nawaz Mohamed Ibrahim; Guojie Zhang; Kai-Xing Qu; Olivier Hanotte; Beth Shapiro; Mirte Bosse; Dong-Dong Wu; Jian-Lin Han; Ya-Ping Zhang
Journal:  BMC Biol       Date:  2021-06-16       Impact factor: 7.431

  9 in total

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