Literature DB >> 2894688

The bending of DNA in nucleosomes and its wider implications.

A A Travers1, A Klug.   

Abstract

The DNA of a nucleosome core particle is wrapped tightly around a histone octamer with approximately 80 base pairs per superhelical turn. Studies of both naturally occurring and reconstituted systems have shown that DNA sequences very often adopt well-defined locations with respect to the octamer. Recent work in this laboratory has provided a structural explanation for this sequence-dependent positioning in terms of the differential flexibility of different sequences and of departures from smooth bending. The 'rules' that are emerging for DNA bendability and, from the results of other workers, on intrinsically bent DNA, are likely to be useful in considering looping and bending of DNA in other processes in which it is thought to be wrapped around a protein core.

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Year:  1987        PMID: 2894688     DOI: 10.1098/rstb.1987.0080

Source DB:  PubMed          Journal:  Philos Trans R Soc Lond B Biol Sci        ISSN: 0962-8436            Impact factor:   6.237


  57 in total

1.  Photoreactivation of UV-induced cyclobutane pyrimidine dimers in the MFA2 gene of Saccharomyces cerevisiae.

Authors:  Nerys R Morse; Valerie Meniel; Raymond Waters
Journal:  Nucleic Acids Res       Date:  2002-04-15       Impact factor: 16.971

Review 2.  Nucleosome structural studies.

Authors:  Song Tan; Curt A Davey
Journal:  Curr Opin Struct Biol       Date:  2010-12-19       Impact factor: 6.809

3.  Wrapping of genomic polydA.polydT tracts around nucleosome core particles.

Authors:  K R Fox
Journal:  Nucleic Acids Res       Date:  1992-03-25       Impact factor: 16.971

Review 4.  DNA looping.

Authors:  K S Matthews
Journal:  Microbiol Rev       Date:  1992-03

5.  The promoter and enhancer of the inactive chicken beta-globin gene contains precisely positioned nucleosomes.

Authors:  R Buckle; M Balmer; A Yenidunya; J Allan
Journal:  Nucleic Acids Res       Date:  1991-03-25       Impact factor: 16.971

6.  A novel roll-and-slide mechanism of DNA folding in chromatin: implications for nucleosome positioning.

Authors:  Michael Y Tolstorukov; Andrew V Colasanti; David M McCandlish; Wilma K Olson; Victor B Zhurkin
Journal:  J Mol Biol       Date:  2007-05-24       Impact factor: 5.469

7.  Formation and positioning of nucleosomes: effect of sequence-dependent long-range correlated structural disorder.

Authors:  C Vaillant; B Audit; C Thermes; A Arnéodo
Journal:  Eur Phys J E Soft Matter       Date:  2006-02-14       Impact factor: 1.890

8.  Multi-alphabet consensus algorithm for identification of low specificity protein-DNA interactions.

Authors:  A V Ulyanov; G D Stormo
Journal:  Nucleic Acids Res       Date:  1995-04-25       Impact factor: 16.971

9.  Transcription factor access is mediated by accurately positioned nucleosomes on the mouse mammary tumor virus promoter.

Authors:  T K Archer; M G Cordingley; R G Wolford; G L Hager
Journal:  Mol Cell Biol       Date:  1991-02       Impact factor: 4.272

10.  A method for sequence-specific deletion mutagenesis.

Authors:  P King; S Goodbourn
Journal:  Nucleic Acids Res       Date:  1992-03-11       Impact factor: 16.971

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