Literature DB >> 28944346

Falx Cerebri Segmentation via Multi-atlas Boundary Fusion.

Jeffrey Glaister1, Aaron Carass1,2, Dzung L Pham3, John A Butman4, Jerry L Prince1,2.   

Abstract

The falx cerebri is a meningeal projection of dura in the brain, separating the cerebral hemispheres. It has stiffer mechanical properties than surrounding tissue and must be accurately segmented for building computational models of traumatic brain injury. In this work, we propose a method to segment the falx using T1-weighted magnetic resonance images (MRI) and susceptibility-weighted MRI (SWI). Multi-atlas whole brain segmentation is performed using the T1-weighted MRI and the gray matter cerebrum labels are extended into the longitudinal fissure using fast marching to find an initial estimate of the falx. To correct the falx boundaries, we register and then deform a set of SWI with manually delineated falx boundaries into the subject space. The continuous-STAPLE algorithm fuses sets of corresponding points to produce an estimate of the corrected falx boundary. Correspondence between points on the deformed falx boundaries is obtained using coherent point drift. We compare our method to manual ground truth, a multi-atlas approach without correction, and single-atlas approaches.

Entities:  

Keywords:  Falx cerebri; MRI; boundary fusion; segmentation

Mesh:

Year:  2017        PMID: 28944346      PMCID: PMC5607028          DOI: 10.1007/978-3-319-66182-7_11

Source DB:  PubMed          Journal:  Med Image Comput Comput Assist Interv


  11 in total

1.  Point set registration: coherent point drift.

Authors:  Andriy Myronenko; Xubo Song
Journal:  IEEE Trans Pattern Anal Mach Intell       Date:  2010-12       Impact factor: 6.226

2.  Intraoperative brain shift compensation: accounting for dural septa.

Authors:  Ishita Chen; Aaron M Coffey; Siyi Ding; Prashanth Dumpuri; Benoit M Dawant; Reid C Thompson; Michael I Miga
Journal:  IEEE Trans Biomed Eng       Date:  2010-11-22       Impact factor: 4.538

Review 3.  Finite-element models of the human head.

Authors:  K Voo; S Kumaresan; F A Pintar; N Yoganandan; A Sances
Journal:  Med Biol Eng Comput       Date:  1996-09       Impact factor: 2.602

4.  Human head dynamic response to side impact by finite element modeling.

Authors:  J S Ruan; T Khalil; A I King
Journal:  J Biomech Eng       Date:  1991-08       Impact factor: 2.097

5.  A continuous STAPLE for scalar, vector, and tensor images: an application to DTI analysis.

Authors:  Olivier Commowick; Simon K Warfield
Journal:  IEEE Trans Med Imaging       Date:  2008-12-09       Impact factor: 10.048

6.  Consistent cortical reconstruction and multi-atlas brain segmentation.

Authors:  Yuankai Huo; Andrew J Plassard; Aaron Carass; Susan M Resnick; Dzung L Pham; Jerry L Prince; Bennett A Landman
Journal:  Neuroimage       Date:  2016-05-13       Impact factor: 6.556

7.  Symmetric diffeomorphic image registration with cross-correlation: evaluating automated labeling of elderly and neurodegenerative brain.

Authors:  B B Avants; C L Epstein; M Grossman; J C Gee
Journal:  Med Image Anal       Date:  2007-06-23       Impact factor: 8.545

8.  Multi-Atlas Segmentation with Joint Label Fusion.

Authors:  Hongzhi Wang; Jung W Suh; Sandhitsu R Das; John B Pluta; Caryne Craige; Paul A Yushkevich
Journal:  IEEE Trans Pattern Anal Mach Intell       Date:  2012-06-26       Impact factor: 6.226

9.  Automated ventricular systems segmentation in brain CT images by combining low-level segmentation and high-level template matching.

Authors:  Wenan Chen; Rebecca Smith; Soo-Yeon Ji; Kevin R Ward; Kayvan Najarian
Journal:  BMC Med Inform Decis Mak       Date:  2009-11-03       Impact factor: 2.796

10.  101 labeled brain images and a consistent human cortical labeling protocol.

Authors:  Arno Klein; Jason Tourville
Journal:  Front Neurosci       Date:  2012-12-05       Impact factor: 4.677

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  1 in total

Review 1.  MR Imaging of Human Brain Mechanics In Vivo: New Measurements to Facilitate the Development of Computational Models of Brain Injury.

Authors:  Philip V Bayly; Ahmed Alshareef; Andrew K Knutsen; Kshitiz Upadhyay; Ruth J Okamoto; Aaron Carass; John A Butman; Dzung L Pham; Jerry L Prince; K T Ramesh; Curtis L Johnson
Journal:  Ann Biomed Eng       Date:  2021-07-01       Impact factor: 4.219

  1 in total

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