| Literature DB >> 28932452 |
Sayed Riyadh1, David L Hughes2, Musa A Said1.
Abstract
The title compound, [(1-{4-[2-(2,4-di-hydroxy-phen-yl)diazen-1-yl]phen-yl}ethyl-idene)amino]-thio-urea, 1,1,2,2-tetra-chloro-ethane monosolvate, C15H15N5O2S·C2H2Cl4, was prepared from 4-(4-acetyl-phenyl-diazendi-yl)resorcinol and thio-semicarbazide and recrystallized from mixed solvents of tetra-chloro-ethane and n-hexane. 1H NMR and X-ray diffraction data are in support of the thione tautomeric form. The X-ray analysis shows the mol-ecule crystallizes as a zwitterion, with proton transfer from the nominal phenol to the azide group; the N-N bond length is 1.291 (5) Å, and an intra-molecular N-H⋯O hydrogen bond is formed. In the crystal, N-H⋯O, N-H⋯N and O-H⋯S hydrogen bonds connect the mol-ecules into a three-dimensional network. The tetra-chloro-ethane solvent mol-ecules are linked to this network through weak C-H⋯O linkages.Entities:
Keywords: Schiff base; crystal structure; hydrogen bonding; tautomerism
Year: 2017 PMID: 28932452 PMCID: PMC5588558 DOI: 10.1107/S2056989017010830
Source DB: PubMed Journal: Acta Crystallogr E Crystallogr Commun
Figure 1Tautomeric structures of ethylidenethiosemicarbazides.
Figure 2The molecular structure of (I) and the hydrogen-bond interactions (not including the ‘weak’ hydrogen bonds). Displacement ellipsoids are drawn at the 50% probability level. Symmetry operations (in the text and all figures): (i) 2 + x, − y, z − ; (ii) x + 1, − y, − z; (iii) −x − 1, 1 − y, 1 − z; (iv) x − 1, − y, + z; (v) x − 2, − y, + z; (vi) x + 1, y, z; (vii) −x, 1 − y, 1 − z; (viii) x − 1, y, z.
Figure 3The 1H NMR spectrum for compound 3, showing one form of the product.
Hydrogen-bond geometry (Å, °)
|
|
| H⋯ |
|
|
|---|---|---|---|---|
| C6—H6⋯S20i | 0.93 | 2.89 | 3.634 (4) | 137 |
| C10—H10⋯Cl25ii | 0.93 | 2.88 | 3.807 (5) | 172 |
| C151—H15 | 0.96 | 2.87 | 3.458 (4) | 121 |
| N17—H17⋯S20iii | 0.86 | 2.63 | 3.483 (4) | 173 |
| C22—H22⋯O1iv | 0.98 | 2.37 | 3.345 (8) | 175 |
| O5—H5 | 0.80 (2) | 2.43 (2) | 3.227 (4) | 173 (5) |
| N8—H8 | 0.85 (2) | 1.78 (3) | 2.528 (4) | 147 (4) |
| N19—H19 | 0.84 (2) | 2.05 (2) | 2.862 (5) | 163 (4) |
| N19—H19 | 0.84 (2) | 2.16 (5) | 2.578 (5) | 111 (4) |
Symmetry codes: (i) ; (ii) ; (iii) ; (iv) .
Figure 4View of the packing in (I) along the a-axis direction, showing the hydrogen-bonded system.
Figure 5View of the overlapping molecules, showing some of the shorter π–π stacking contacts.
Experimental details
| Crystal data | |
| Chemical formula | C15H15N5O2S·C2H2Cl4 |
|
| 497.21 |
| Crystal system, space group | Monoclinic, |
| Temperature (K) | 295 |
|
| 5.9124 (2), 17.6155 (5), 20.3351 (6) |
| β (°) | 96.563 (3) |
|
| 2104.02 (11) |
|
| 4 |
| Radiation type | Mo |
| μ (mm−1) | 0.69 |
| Crystal size (mm) | 0.42 × 0.09 × 0.08 |
| Data collection | |
| Diffractometer | Oxford Diffraction Xcalibur 3/Sapphire3 CCD |
| Absorption correction | Multi-scan ( |
|
| 0.728, 1.000 |
| No. of measured, independent and observed [ | 28750, 3675, 3213 |
|
| 0.053 |
| (sin θ/λ)max (Å−1) | 0.595 |
| Refinement | |
|
| 0.076, 0.204, 1.09 |
| No. of reflections | 3675 |
| No. of parameters | 279 |
| No. of restraints | 4 |
| H-atom treatment | H atoms treated by a mixture of independent and constrained refinement |
| Δρmax, Δρmin (e Å−3) | 0.72, −0.79 |
Computer programs: CrysAlis PRO (Agilent, 2014 ▸), SHELXS97 (Sheldrick, 2008 ▸), ORTEP (Johnson, 1976 ▸; Farrugia, 2012 ▸), SHELXL2014 (Sheldrick, 2015 ▸) and WinGX (Farrugia, 2012 ▸).
| C15H15N5O2S·C2H2Cl4 | |
| Monoclinic, | Mo |
| Cell parameters from 5694 reflections | |
| θ = 3.5–28.7° | |
| µ = 0.69 mm−1 | |
| β = 96.563 (3)° | |
| Prism, dark red | |
| 0.42 × 0.09 × 0.08 mm |
| Oxford Diffraction Xcalibur 3/Sapphire3 CCD diffractometer | 3675 independent reflections |
| Radiation source: Enhance (Mo) X-ray Source | 3213 reflections with |
| Graphite monochromator | |
| Detector resolution: 16.0050 pixels mm-1 | θmax = 25.0°, θmin = 3.6° |
| Thin slice φ and ω scans | |
| Absorption correction: multi-scan (CrysAlis PRO; Agilent, 2014) | |
| 28750 measured reflections |
| Refinement on | Primary atom site location: structure-invariant direct methods |
| Least-squares matrix: full | Secondary atom site location: difference Fourier map |
| Hydrogen site location: mixed | |
| H atoms treated by a mixture of independent and constrained refinement | |
| 3675 reflections | (Δ/σ)max < 0.001 |
| 279 parameters | Δρmax = 0.72 e Å−3 |
| 4 restraints | Δρmin = −0.79 e Å−3 |
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
| O1 | 0.9543 (5) | 0.22114 (17) | 0.20187 (14) | 0.0225 (7) | |
| C1 | 1.0971 (7) | 0.1827 (2) | 0.2420 (2) | 0.0183 (9) | |
| C2 | 1.0684 (7) | 0.1769 (2) | 0.3120 (2) | 0.0181 (9) | |
| C3 | 1.2286 (7) | 0.1342 (2) | 0.3548 (2) | 0.0217 (9) | |
| H3 | 1.2112 | 0.1308 | 0.3996 | 0.026* | |
| C4 | 1.4060 (7) | 0.0984 (3) | 0.3313 (2) | 0.0239 (10) | |
| H4 | 1.5092 | 0.0706 | 0.3596 | 0.029* | |
| C5 | 1.4325 (7) | 0.1039 (2) | 0.2629 (2) | 0.0203 (9) | |
| O5 | 1.6154 (5) | 0.06701 (19) | 0.24376 (17) | 0.0270 (7) | |
| C6 | 1.2855 (7) | 0.1452 (2) | 0.2200 (2) | 0.0187 (9) | |
| H6 | 1.3101 | 0.1486 | 0.1757 | 0.022* | |
| N7 | 0.8994 (6) | 0.2111 (2) | 0.34044 (17) | 0.0189 (8) | |
| N8 | 0.7553 (6) | 0.2510 (2) | 0.30244 (17) | 0.0184 (8) | |
| C9 | 0.5772 (7) | 0.2898 (2) | 0.3284 (2) | 0.0170 (8) | |
| C10 | 0.5488 (7) | 0.2886 (2) | 0.3949 (2) | 0.0189 (9) | |
| H10 | 0.6486 | 0.2612 | 0.4246 | 0.023* | |
| C11 | 0.3698 (7) | 0.3286 (2) | 0.4168 (2) | 0.0194 (9) | |
| H11 | 0.3503 | 0.3277 | 0.4615 | 0.023* | |
| C12 | 0.2182 (7) | 0.3702 (2) | 0.3729 (2) | 0.0159 (8) | |
| C13 | 0.2511 (7) | 0.3713 (2) | 0.3063 (2) | 0.0205 (9) | |
| H13 | 0.1541 | 0.3996 | 0.2765 | 0.025* | |
| C14 | 0.4281 (7) | 0.3304 (3) | 0.2839 (2) | 0.0221 (9) | |
| H14 | 0.4468 | 0.3303 | 0.2391 | 0.027* | |
| C15 | 0.0244 (7) | 0.4110 (2) | 0.3983 (2) | 0.0158 (8) | |
| C151 | −0.1144 (7) | 0.4677 (3) | 0.3562 (2) | 0.0235 (10) | |
| H15A | −0.2643 | 0.4477 | 0.3439 | 0.035* | |
| H15B | −0.0428 | 0.4779 | 0.3171 | 0.035* | |
| H15C | −0.1251 | 0.5139 | 0.3807 | 0.035* | |
| N16 | −0.0111 (5) | 0.39265 (19) | 0.45721 (17) | 0.0156 (7) | |
| N17 | −0.1850 (5) | 0.42611 (19) | 0.48636 (17) | 0.0165 (7) | |
| H17 | −0.2660 | 0.4619 | 0.4670 | 0.020* | |
| C18 | −0.2233 (7) | 0.4003 (2) | 0.5467 (2) | 0.0166 (9) | |
| N19 | −0.0835 (7) | 0.3482 (2) | 0.57381 (19) | 0.0249 (9) | |
| S20 | −0.44392 (18) | 0.43497 (6) | 0.58404 (5) | 0.0214 (3) | |
| C21 | 0.2745 (18) | 0.1205 (5) | 0.5978 (4) | 0.091 (3) | |
| H21 | 0.3296 | 0.1016 | 0.6421 | 0.109* | |
| C22 | 0.0344 (16) | 0.1387 (4) | 0.5960 (4) | 0.076 (2) | |
| H22 | 0.0155 | 0.1820 | 0.6251 | 0.091* | |
| Cl23 | 0.4115 (4) | 0.21230 (11) | 0.58528 (10) | 0.0710 (6) | |
| Cl24 | 0.3333 (5) | 0.05129 (12) | 0.53859 (10) | 0.0888 (8) | |
| Cl25 | −0.0877 (4) | 0.16005 (11) | 0.51483 (9) | 0.0729 (6) | |
| Cl26 | −0.0903 (5) | 0.05355 (12) | 0.62934 (11) | 0.0894 (8) | |
| H5O | 1.612 (8) | 0.068 (3) | 0.2043 (10) | 0.019 (13)* | |
| H8N | 0.776 (8) | 0.249 (3) | 0.2620 (11) | 0.021 (12)* | |
| H19A | −0.101 (7) | 0.330 (2) | 0.6111 (13) | 0.006 (10)* | |
| H19B | 0.023 (6) | 0.336 (3) | 0.552 (2) | 0.025 (13)* |
| O1 | 0.0237 (16) | 0.0269 (17) | 0.0174 (15) | 0.0069 (13) | 0.0040 (12) | −0.0021 (13) |
| C1 | 0.018 (2) | 0.016 (2) | 0.021 (2) | −0.0031 (16) | 0.0043 (17) | −0.0043 (17) |
| C2 | 0.016 (2) | 0.016 (2) | 0.023 (2) | −0.0029 (16) | 0.0061 (16) | −0.0041 (17) |
| C3 | 0.024 (2) | 0.022 (2) | 0.021 (2) | 0.0003 (17) | 0.0072 (18) | 0.0012 (17) |
| C4 | 0.022 (2) | 0.024 (2) | 0.026 (2) | 0.0029 (18) | 0.0021 (18) | 0.0023 (18) |
| C5 | 0.016 (2) | 0.016 (2) | 0.029 (2) | −0.0015 (16) | 0.0068 (17) | −0.0071 (18) |
| O5 | 0.0237 (16) | 0.0311 (18) | 0.0277 (19) | 0.0112 (14) | 0.0090 (14) | −0.0021 (15) |
| C6 | 0.020 (2) | 0.019 (2) | 0.018 (2) | 0.0012 (17) | 0.0079 (17) | −0.0043 (17) |
| N7 | 0.0172 (17) | 0.0191 (18) | 0.0212 (18) | −0.0015 (14) | 0.0056 (14) | −0.0021 (15) |
| N8 | 0.0173 (18) | 0.0221 (19) | 0.0167 (19) | 0.0001 (14) | 0.0065 (14) | −0.0041 (15) |
| C9 | 0.0158 (19) | 0.017 (2) | 0.020 (2) | −0.0013 (16) | 0.0074 (16) | −0.0032 (16) |
| C10 | 0.017 (2) | 0.019 (2) | 0.021 (2) | 0.0003 (16) | 0.0023 (16) | −0.0008 (17) |
| C11 | 0.020 (2) | 0.024 (2) | 0.015 (2) | 0.0007 (17) | 0.0057 (16) | −0.0029 (17) |
| C12 | 0.0152 (19) | 0.013 (2) | 0.020 (2) | −0.0036 (15) | 0.0046 (16) | −0.0029 (16) |
| C13 | 0.020 (2) | 0.020 (2) | 0.022 (2) | 0.0050 (17) | 0.0049 (17) | 0.0043 (17) |
| C14 | 0.026 (2) | 0.025 (2) | 0.017 (2) | 0.0006 (18) | 0.0104 (18) | −0.0005 (17) |
| C15 | 0.0140 (19) | 0.014 (2) | 0.020 (2) | −0.0013 (15) | 0.0043 (16) | −0.0029 (16) |
| C151 | 0.024 (2) | 0.025 (2) | 0.024 (2) | 0.0067 (18) | 0.0113 (18) | 0.0018 (18) |
| N16 | 0.0137 (16) | 0.0143 (17) | 0.0198 (18) | 0.0004 (13) | 0.0061 (13) | −0.0023 (14) |
| N17 | 0.0137 (16) | 0.0159 (17) | 0.0205 (18) | 0.0026 (13) | 0.0054 (13) | 0.0006 (14) |
| C18 | 0.017 (2) | 0.016 (2) | 0.017 (2) | −0.0047 (16) | 0.0062 (16) | −0.0034 (16) |
| N19 | 0.028 (2) | 0.031 (2) | 0.019 (2) | 0.0117 (17) | 0.0143 (16) | 0.0073 (16) |
| S20 | 0.0186 (5) | 0.0267 (6) | 0.0208 (6) | 0.0054 (4) | 0.0112 (4) | 0.0042 (4) |
| C21 | 0.134 (8) | 0.088 (6) | 0.049 (4) | 0.040 (6) | −0.003 (5) | −0.025 (4) |
| C22 | 0.122 (7) | 0.052 (4) | 0.053 (4) | 0.027 (4) | 0.004 (4) | −0.005 (3) |
| Cl23 | 0.0926 (14) | 0.0562 (11) | 0.0691 (12) | −0.0062 (10) | 0.0310 (10) | −0.0010 (9) |
| Cl24 | 0.136 (2) | 0.0733 (13) | 0.0533 (11) | 0.0549 (13) | −0.0076 (11) | −0.0175 (9) |
| Cl25 | 0.1051 (15) | 0.0583 (11) | 0.0539 (10) | 0.0306 (10) | 0.0031 (10) | 0.0093 (8) |
| Cl26 | 0.136 (2) | 0.0649 (13) | 0.0658 (13) | −0.0453 (13) | 0.0050 (12) | 0.0031 (10) |
| O1—C1 | 1.296 (5) | C12—C15 | 1.494 (5) |
| C1—C6 | 1.412 (6) | C13—C14 | 1.389 (6) |
| C1—C2 | 1.456 (6) | C13—H13 | 0.9300 |
| C2—N7 | 1.351 (5) | C14—H14 | 0.9300 |
| C2—C3 | 1.426 (6) | C15—N16 | 1.280 (5) |
| C3—C4 | 1.356 (6) | C15—C151 | 1.499 (6) |
| C3—H3 | 0.9300 | C151—H15A | 0.9600 |
| C4—C5 | 1.420 (6) | C151—H15B | 0.9600 |
| C4—H4 | 0.9300 | C151—H15C | 0.9600 |
| C5—O5 | 1.356 (5) | N16—N17 | 1.377 (5) |
| C5—C6 | 1.369 (6) | N17—C18 | 1.352 (5) |
| O5—H5O | 0.801 (19) | N17—H17 | 0.8600 |
| C6—H6 | 0.9300 | C18—N19 | 1.314 (6) |
| N7—N8 | 1.291 (5) | C18—S20 | 1.696 (4) |
| N8—C9 | 1.408 (5) | N19—H19A | 0.841 (19) |
| N8—H8N | 0.846 (19) | N19—H19B | 0.84 (2) |
| C9—C10 | 1.381 (6) | C21—C22 | 1.451 (13) |
| C9—C14 | 1.388 (6) | C21—Cl24 | 1.776 (8) |
| C10—C11 | 1.387 (6) | C21—Cl23 | 1.840 (11) |
| C10—H10 | 0.9300 | C21—H21 | 0.9800 |
| C11—C12 | 1.398 (6) | C22—Cl25 | 1.766 (8) |
| C11—H11 | 0.9300 | C22—Cl26 | 1.834 (9) |
| C12—C13 | 1.392 (6) | C22—H22 | 0.9800 |
| O1—C1—C6 | 121.7 (4) | C14—C13—H13 | 119.8 |
| O1—C1—C2 | 120.8 (4) | C12—C13—H13 | 119.8 |
| C6—C1—C2 | 117.5 (4) | C9—C14—C13 | 120.0 (4) |
| N7—C2—C3 | 116.5 (4) | C9—C14—H14 | 120.0 |
| N7—C2—C1 | 124.2 (4) | C13—C14—H14 | 120.0 |
| C3—C2—C1 | 119.3 (4) | N16—C15—C12 | 114.6 (4) |
| C4—C3—C2 | 121.1 (4) | N16—C15—C151 | 124.4 (4) |
| C4—C3—H3 | 119.4 | C12—C15—C151 | 121.0 (4) |
| C2—C3—H3 | 119.4 | C15—C151—H15A | 109.5 |
| C3—C4—C5 | 119.3 (4) | C15—C151—H15B | 109.5 |
| C3—C4—H4 | 120.3 | H15A—C151—H15B | 109.5 |
| C5—C4—H4 | 120.3 | C15—C151—H15C | 109.5 |
| O5—C5—C6 | 122.7 (4) | H15A—C151—H15C | 109.5 |
| O5—C5—C4 | 115.4 (4) | H15B—C151—H15C | 109.5 |
| C6—C5—C4 | 121.8 (4) | C15—N16—N17 | 120.3 (3) |
| C5—O5—H5O | 110 (4) | C18—N17—N16 | 117.3 (3) |
| C5—C6—C1 | 120.9 (4) | C18—N17—H17 | 121.4 |
| C5—C6—H6 | 119.6 | N16—N17—H17 | 121.4 |
| C1—C6—H6 | 119.6 | N19—C18—N17 | 116.9 (4) |
| N8—N7—C2 | 117.1 (4) | N19—C18—S20 | 122.9 (3) |
| N7—N8—C9 | 120.7 (3) | N17—C18—S20 | 120.2 (3) |
| N7—N8—H8N | 114 (3) | C18—N19—H19A | 121 (3) |
| C9—N8—H8N | 125 (3) | C18—N19—H19B | 116 (3) |
| C10—C9—C14 | 120.5 (4) | H19A—N19—H19B | 124 (5) |
| C10—C9—N8 | 122.7 (4) | C22—C21—Cl24 | 113.7 (6) |
| C14—C9—N8 | 116.9 (4) | C22—C21—Cl23 | 104.3 (6) |
| C9—C10—C11 | 119.3 (4) | Cl24—C21—Cl23 | 112.7 (5) |
| C9—C10—H10 | 120.4 | C22—C21—H21 | 108.7 |
| C11—C10—H10 | 120.4 | Cl24—C21—H21 | 108.7 |
| C10—C11—C12 | 121.2 (4) | Cl23—C21—H21 | 108.7 |
| C10—C11—H11 | 119.4 | C21—C22—Cl25 | 111.4 (6) |
| C12—C11—H11 | 119.4 | C21—C22—Cl26 | 104.1 (6) |
| C13—C12—C11 | 118.6 (4) | Cl25—C22—Cl26 | 112.4 (5) |
| C13—C12—C15 | 121.9 (4) | C21—C22—H22 | 109.6 |
| C11—C12—C15 | 119.5 (4) | Cl25—C22—H22 | 109.6 |
| C14—C13—C12 | 120.4 (4) | Cl26—C22—H22 | 109.6 |
| O1—C1—C2—N7 | −1.3 (6) | C10—C11—C12—C13 | −0.5 (6) |
| C6—C1—C2—N7 | 178.5 (4) | C10—C11—C12—C15 | 178.5 (4) |
| O1—C1—C2—C3 | 180.0 (4) | C11—C12—C13—C14 | 1.5 (6) |
| C6—C1—C2—C3 | −0.2 (6) | C15—C12—C13—C14 | −177.6 (4) |
| N7—C2—C3—C4 | −179.3 (4) | C10—C9—C14—C13 | 1.1 (6) |
| C1—C2—C3—C4 | −0.5 (6) | N8—C9—C14—C13 | −178.7 (4) |
| C2—C3—C4—C5 | 0.2 (7) | C12—C13—C14—C9 | −1.7 (6) |
| C3—C4—C5—O5 | 179.5 (4) | C13—C12—C15—N16 | 166.6 (4) |
| C3—C4—C5—C6 | 0.9 (7) | C11—C12—C15—N16 | −12.5 (5) |
| O5—C5—C6—C1 | 180.0 (4) | C13—C12—C15—C151 | −12.8 (6) |
| C4—C5—C6—C1 | −1.6 (6) | C11—C12—C15—C151 | 168.2 (4) |
| O1—C1—C6—C5 | −178.9 (4) | C12—C15—N16—N17 | −179.9 (3) |
| C2—C1—C6—C5 | 1.2 (6) | C151—C15—N16—N17 | −0.6 (6) |
| C3—C2—N7—N8 | 178.9 (4) | C15—N16—N17—C18 | 175.4 (4) |
| C1—C2—N7—N8 | 0.2 (6) | N16—N17—C18—N19 | 3.4 (5) |
| C2—N7—N8—C9 | −178.6 (4) | N16—N17—C18—S20 | −176.5 (3) |
| N7—N8—C9—C10 | 1.1 (6) | Cl24—C21—C22—Cl25 | −50.4 (9) |
| N7—N8—C9—C14 | −179.1 (4) | Cl23—C21—C22—Cl25 | 72.7 (6) |
| C14—C9—C10—C11 | −0.1 (6) | Cl24—C21—C22—Cl26 | 71.0 (7) |
| N8—C9—C10—C11 | 179.6 (4) | Cl23—C21—C22—Cl26 | −165.9 (4) |
| C9—C10—C11—C12 | −0.1 (6) |
| H··· | ||||
| C6—H6···S20i | 0.93 | 2.89 | 3.634 (4) | 137 |
| C10—H10···Cl25ii | 0.93 | 2.88 | 3.807 (5) | 172 |
| C151—H15 | 0.96 | 2.87 | 3.458 (4) | 121 |
| N17—H17···S20iii | 0.86 | 2.63 | 3.483 (4) | 173 |
| C22—H22···O1iv | 0.98 | 2.37 | 3.345 (8) | 175 |
| O5—H5 | 0.80 (2) | 2.43 (2) | 3.227 (4) | 173 (5) |
| N8—H8 | 0.85 (2) | 1.78 (3) | 2.528 (4) | 147 (4) |
| N19—H19 | 0.84 (2) | 2.05 (2) | 2.862 (5) | 163 (4) |
| N19—H19 | 0.84 (2) | 2.16 (5) | 2.578 (5) | 111 (4) |