Literature DB >> 28929238

Nuclease integrated kinase super assemblies (NiKs) and their role in RNA processing.

Monica C Pillon1, Robin E Stanley2.   

Abstract

Here we highlight the Grc3/Las1 complex, an essential RNA processing machine that is well conserved across eukaryotes and required for processing the pre-ribosomal RNA (pre-rRNA). Las1 is an endoribonuclease that cleaves the pre-rRNA while Grc3 is a polynucleotide kinase that phosphorylates the Las1-cleaved RNA product. Recently we showed that Grc3 and Las1 assemble into a higher-order complex composed of a dimer of Grc3/Las1 heterodimers that is required for nuclease and kinase activity. Unexpectedly, we found that the Grc3/Las1 complex draws numerous parallels with two other eukaryotic nucleases, Ire1 and RNase L. In this perspective we explore the similarities and differences between this family of nuclease integrated kinase super assemblies (NiKs) and their distinct roles in RNA cleavage.

Entities:  

Keywords:  Grc3; HEPN domain; Ire1; Las1; RNase L; Ribosome biogenesis

Mesh:

Substances:

Year:  2017        PMID: 28929238      PMCID: PMC5820773          DOI: 10.1007/s00294-017-0749-9

Source DB:  PubMed          Journal:  Curr Genet        ISSN: 0172-8083            Impact factor:   3.886


  74 in total

Review 1.  HEPN: a common domain in bacterial drug resistance and human neurodegenerative proteins.

Authors:  Marcin Grynberg; Heidi Erlandsen; Adam Godzik
Journal:  Trends Biochem Sci       Date:  2003-05       Impact factor: 13.807

Review 2.  The oligoadenylate synthetase family: an ancient protein family with multiple antiviral activities.

Authors:  Helle Kristiansen; Hans Henrik Gad; Signe Eskildsen-Larsen; Philippe Despres; Rune Hartmann
Journal:  J Interferon Cytokine Res       Date:  2010-12-12       Impact factor: 2.607

3.  Coordinated Ribosomal ITS2 RNA Processing by the Las1 Complex Integrating Endonuclease, Polynucleotide Kinase, and Exonuclease Activities.

Authors:  Lisa Gasse; Dirk Flemming; Ed Hurt
Journal:  Mol Cell       Date:  2015-12-03       Impact factor: 17.970

4.  Structure of Escherichia coli RNase E catalytic domain and implications for RNA turnover.

Authors:  Anastasia J Callaghan; Maria Jose Marcaida; Jonathan A Stead; Kenneth J McDowall; William G Scott; Ben F Luisi
Journal:  Nature       Date:  2005-10-20       Impact factor: 49.962

5.  Unfolded proteins are Ire1-activating ligands that directly induce the unfolded protein response.

Authors:  Brooke M Gardner; Peter Walter
Journal:  Science       Date:  2011-08-18       Impact factor: 47.728

6.  Discovery and Functional Characterization of Diverse Class 2 CRISPR-Cas Systems.

Authors:  Sergey Shmakov; Omar O Abudayyeh; Kira S Makarova; Yuri I Wolf; Jonathan S Gootenberg; Ekaterina Semenova; Leonid Minakhin; Julia Joung; Silvana Konermann; Konstantin Severinov; Feng Zhang; Eugene V Koonin
Journal:  Mol Cell       Date:  2015-10-22       Impact factor: 17.970

7.  Intrinsic molecular activities of the interferon-induced 2-5A-dependent RNase.

Authors:  B Dong; L Xu; A Zhou; B A Hassel; X Lee; P F Torrence; R H Silverman
Journal:  J Biol Chem       Date:  1994-05-13       Impact factor: 5.157

8.  The complexity of human ribosome biogenesis revealed by systematic nucleolar screening of Pre-rRNA processing factors.

Authors:  Lionel Tafforeau; Christiane Zorbas; Jean-Louis Langhendries; Sahra-Taylor Mullineux; Vassiliki Stamatopoulou; Romain Mullier; Ludivine Wacheul; Denis L J Lafontaine
Journal:  Mol Cell       Date:  2013-08-22       Impact factor: 17.970

9.  Structural and functional basis for RNA cleavage by Ire1.

Authors:  Alexei V Korennykh; Andrei A Korostelev; Pascal F Egea; Janet Finer-Moore; Robert M Stroud; Chao Zhang; Kevan M Shokat; Peter Walter
Journal:  BMC Biol       Date:  2011-07-06       Impact factor: 7.431

10.  A protein interaction map of the LSU processome.

Authors:  Kathleen L McCann; J Michael Charette; Nicholas G Vincent; Susan J Baserga
Journal:  Genes Dev       Date:  2015-04-15       Impact factor: 11.361

View more
  6 in total

1.  Nonradioactive Assay to Measure Polynucleotide Phosphorylation of Small Nucleotide Substrates.

Authors:  Monica C Pillon; Robin E Stanley
Journal:  J Vis Exp       Date:  2020-05-08       Impact factor: 1.355

Review 2.  Intron specificity in pre-mRNA splicing.

Authors:  Shravan Kumar Mishra; Poonam Thakran
Journal:  Curr Genet       Date:  2018-01-03       Impact factor: 3.886

3.  Ccm1p is a 15S rRNA primary transcript processing factor as elucidated by a novel in vivo system in Saccharomyces cerevisiae.

Authors:  J Ignacio Moreno; Ineshia S Coleman; Classie L Johnson; Dominique S Green; Marta A Piva
Journal:  Curr Genet       Date:  2020-03-09       Impact factor: 3.886

4.  It takes two (Las1 HEPN endoribonuclease domains) to cut RNA correctly.

Authors:  Monica C Pillon; Kevin H Goslen; Jacob Gordon; Melissa L Wells; Jason G Williams; Robin E Stanley
Journal:  J Biol Chem       Date:  2020-03-27       Impact factor: 5.157

Review 5.  HEPN RNases - an emerging class of functionally distinct RNA processing and degradation enzymes.

Authors:  Monica C Pillon; Jacob Gordon; Meredith N Frazier; Robin E Stanley
Journal:  Crit Rev Biochem Mol Biol       Date:  2020-12-22       Impact factor: 8.250

6.  Characterization of the molecular crosstalk within the essential Grc3/Las1 pre-rRNA processing complex.

Authors:  Monica C Pillon; Mack Sobhany; Robin E Stanley
Journal:  RNA       Date:  2018-02-09       Impact factor: 4.942

  6 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.