Literature DB >> 28914669

Infection Staging and Incidence Surveillance Applications of High Dynamic Range Diagnostic Immuno-Assay Platforms.

Eduard Grebe1, Alex Welte, Jake Hall, Sheila M Keating, Shelley N Facente, Kara Marson, Jeffrey N Martin, Susan J Little, Matthew A Price, Esper G Kallas, Michael P Busch, Christopher D Pilcher, Gary Murphy.   

Abstract

BACKGROUND: Custom HIV staging assays, including the Sedia HIV-1 Limiting Antigen (LAg) Avidity EIA and avidity modifications of the Ortho VITROS anti-HIV-1+2 and Abbott ARCHITECT HIV Ag/Ab Combo assays, are used to identify "recent" infections in clinical settings and for cross-sectional HIV incidence estimation. However, the high dynamic range of chemiluminescent platforms allows differentiating recent and long-standing infection on signal intensity, and this raises the prospect of using unmodified diagnostic assays for infection timing and surveillance applications.
METHODS: We tested a panel of 2500 well-characterized specimens with estimable duration of HIV infection with the 3 assays and the unmodified ARCHITECT. Regression models were used to estimate mean durations of recent infection (MDRIs), context-specific false-recent rates (FRRs) and correlation between diagnostic signal intensity and LAg measurements. Hypothetical epidemiological scenarios were constructed to evaluate utility in surveillance applications.
RESULTS: Over a range of MDRIs (reflecting recency discrimination thresholds), a diluted ARCHITECT-based RITA produced lower FRRs than the VITROS platform (FRR ≈ 0.5% and 1.5%, respectively at MDRI ≈ 200 days), and the unmodified diagnostic ARCHITECT produces incidence estimates with comparable precision to LAg (relative SE ≈ 17.5% and 15%, respectively at MDRI ≈ 200 days). ARCHITECT S/CO measurements were highly correlated with LAg optical density measurements (r = 0.80), and values below 200 are strongly predictive of LAg recency and duration of infection less than 1 year.
CONCLUSIONS: Low quantitative measurements from the unmodified ARCHITECT obviate the need for additional recency testing, and its use is feasible in clinical staging and incidence surveillance applications.

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Year:  2017        PMID: 28914669      PMCID: PMC5680100          DOI: 10.1097/QAI.0000000000001537

Source DB:  PubMed          Journal:  J Acquir Immune Defic Syndr        ISSN: 1525-4135            Impact factor:   3.731


  18 in total

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Authors:  Michael P Busch; Christopher D Pilcher; Timothy D Mastro; John Kaldor; Gaby Vercauteren; William Rodriguez; Christine Rousseau; Thomas M Rehle; Alex Welte; Megan D Averill; Jesus M Garcia Calleja
Journal:  AIDS       Date:  2010-11-27       Impact factor: 4.177

2.  A new general biomarker-based incidence estimator.

Authors:  Reshma Kassanjee; Thomas A McWalter; Till Bärnighausen; Alex Welte
Journal:  Epidemiology       Date:  2012-09       Impact factor: 4.822

3.  Avidity Index for anti-HIV antibodies: comparison between third- and fourth-generation automated immunoassays.

Authors:  Barbara Suligoi; Anna Rodella; Mariangela Raimondo; Vincenza Regine; Luigina Terlenghi; Nino Manca; Salvatore Casari; Laura Camoni; Maria Cristina Salfa; Claudio Galli
Journal:  J Clin Microbiol       Date:  2011-05-04       Impact factor: 5.948

4.  Human immunodeficiency virus (HIV) antibody avidity testing to identify recent infection in newly diagnosed HIV type 1 (HIV-1)-seropositive persons infected with diverse HIV-1 subtypes.

Authors:  A Chawla; G Murphy; C Donnelly; C L Booth; M Johnson; J V Parry; A Phillips; A M Geretti
Journal:  J Clin Microbiol       Date:  2006-12-06       Impact factor: 5.948

5.  HIV incidence determination in the United States: a multiassay approach.

Authors:  Oliver Laeyendecker; Ron Brookmeyer; Matthew M Cousins; Caroline E Mullis; Jacob Konikoff; Deborah Donnell; Connie Celum; Susan P Buchbinder; George R Seage; Gregory D Kirk; Shruti H Mehta; Jacquie Astemborski; Lisa P Jacobson; Joseph B Margolick; Joelle Brown; Thomas C Quinn; Susan H Eshleman
Journal:  J Infect Dis       Date:  2012-11-05       Impact factor: 5.226

Review 6.  Moving towards a reliable HIV incidence test - current status, resources available, future directions and challenges ahead.

Authors:  G Murphy; C D Pilcher; S M Keating; R Kassanjee; S N Facente; A Welte; E Grebe; K Marson; M P Busch; P Dailey; N Parkin; J Osborn; S Ongarello; K Marsh; J M Garcia-Calleja
Journal:  Epidemiol Infect       Date:  2016-12-22       Impact factor: 4.434

7.  The effect of sample handling on cross sectional HIV incidence testing results.

Authors:  Oliver Laeyendecker; Amanda Latimore; Susan H Eshleman; Jean Summerton; Amy E Oliver; Jordyn Gamiel; Trudy Dobbs; Joanne Mei; Gary Murphy; John V Parry; S Michele Owen; Thomas C Quinn
Journal:  PLoS One       Date:  2011-10-26       Impact factor: 3.240

8.  Independent assessment of candidate HIV incidence assays on specimens in the CEPHIA repository.

Authors:  Reshma Kassanjee; Christopher D Pilcher; Sheila M Keating; Shelley N Facente; Elaine McKinney; Matthew A Price; Jeffrey N Martin; Susan Little; Frederick M Hecht; Esper G Kallas; Alex Welte; Michael P Busch; Gary Murphy
Journal:  AIDS       Date:  2014-10-23       Impact factor: 4.177

9.  A general HIV incidence inference scheme based on likelihood of individual level data and a population renewal equation.

Authors:  Guy Severin Mahiane; Rachid Ouifki; Hilmarie Brand; Wim Delva; Alex Welte
Journal:  PLoS One       Date:  2012-09-12       Impact factor: 3.240

10.  Performance of the Bio-Rad Geenius HIV1/2 Supplemental Assay in Detecting "Recent" HIV Infection and Calculating Population Incidence.

Authors:  Sheila M Keating; Reshma Kassanjee; Mila Lebedeva; Shelley N Facente; Jeffrey C MacArthur; Eduard Grebe; Gary Murphy; Alex Welte; Jeffrey N Martin; Susan Little; Matthew A Price; Esper G Kallas; Michael P Busch; Christopher D Pilcher
Journal:  J Acquir Immune Defic Syndr       Date:  2016-12-15       Impact factor: 3.731

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  10 in total

1.  Discrimination between recent and non-recent HIV infections using routine diagnostic serological assays.

Authors:  Jaythoon Hassan; Joanne Moran; Gary Murphy; Olivia Mason; Jeff Connell; Cillian De Gascun
Journal:  Med Microbiol Immunol       Date:  2019-03-11       Impact factor: 3.402

2.  Decreased Seroreactivity in Individuals Initiating Antiretroviral Therapy during Acute HIV Infection.

Authors:  Mark M Manak; Linda L Jagodzinski; Ashley Shutt; Jennifer A Malia; Mike Leos; Jason Ouellette; Siriwat Akapirat; Donn L Colby; Nittaya Phanuphak; Leigh Anne Eller; Merlin L Robb; Mark de Souza; Jintanat Ananworanich; Sheila A Peel
Journal:  J Clin Microbiol       Date:  2019-09-24       Impact factor: 5.948

3.  An HIV Diagnostic Testing Algorithm Using the cobas HIV-1/HIV-2 Qualitative Assay for HIV Type Differentiation and Confirmation.

Authors:  Dana Duncan; John Duncan; Bastian Kramer; Alex Y Nilsson; Betiel Haile; Ann Butcher; Shikha Chugh; Paul Baum; Grace M Aldrovandi; Stephen Young; Ann K Avery; Karen Tashima; Alexandra Valsamakis; Joseph D Yao; Ming Chang; Robert W Coombs
Journal:  J Clin Microbiol       Date:  2021-06-18       Impact factor: 5.948

4.  Performance comparison of the Maxim and Sedia Limiting Antigen Avidity assays for HIV incidence surveillance.

Authors:  Joseph B Sempa; Alex Welte; Michael P Busch; Jake Hall; Dylan Hampton; Shelley N Facente; Sheila M Keating; Kara Marson; Neil Parkin; Christopher D Pilcher; Gary Murphy; Eduard Grebe
Journal:  PLoS One       Date:  2019-07-26       Impact factor: 3.240

5.  Challenges to the performance of current HIV diagnostic assays and the need for centralized specimen archives: a review of the Consortium for the Evaluation and Performance of HIV Incidence Assays (CEPHIA) repository.

Authors:  Shelley N Facente; Michael P Busch; Eduard Grebe; Christopher D Pilcher; Alex Welte; Brian Rice; Gary Murphy
Journal:  Gates Open Res       Date:  2019-07-23

6.  Cumulative viral load as a predictor of CD4+ T-cell response to antiretroviral therapy using Bayesian statistical models.

Authors:  Joseph B Sempa; Theresa M Rossouw; Emmanuel Lesaffre; Martin Nieuwoudt
Journal:  PLoS One       Date:  2019-11-13       Impact factor: 3.240

7.  Evaluation of the Abbott ARCHITECT HIV Ag/Ab combo assay for determining recent HIV-1 infection.

Authors:  Kelly A Curtis; Donna L Rudolph; Yi Pan; Kevin Delaney; Kathryn Anastos; Jack DeHovitz; Seble G Kassaye; Carl V Hanson; Audrey L French; Elizabeth Golub; Adaora A Adimora; Igho Ofotokun; Hector Bolivar; Mirjam-Colette Kempf; Philip J Peters; William M Switzer
Journal:  PLoS One       Date:  2021-07-01       Impact factor: 3.240

8.  Interpreting HIV diagnostic histories into infection time estimates: analytical framework and online tool.

Authors:  Eduard Grebe; Shelley N Facente; Jeremy Bingham; Christopher D Pilcher; Andrew Powrie; Jarryd Gerber; Gareth Priede; Trust Chibawara; Michael P Busch; Gary Murphy; Reshma Kassanjee; Alex Welte
Journal:  BMC Infect Dis       Date:  2019-10-26       Impact factor: 3.090

9.  Tolerability of four-drug antiretroviral combination therapy in primary HIV-1 infection.

Authors:  J E Burns; W Stöhr; S Kinloch-De Loes; J Fox; A Clarke; M Nelson; J Thornhill; A Babiker; J Frater; S L Pett; S Fidler
Journal:  HIV Med       Date:  2021-05-08       Impact factor: 3.180

Review 10.  Use of HIV Recency Assays for HIV Incidence Estimation and Other Surveillance Use Cases: Systematic Review.

Authors:  Shelley N Facente; Eduard Grebe; Andrew D Maher; Douglas Fox; Susan Scheer; Mary Mahy; Shona Dalal; David Lowrance; Kimberly Marsh
Journal:  JMIR Public Health Surveill       Date:  2022-03-11
  10 in total

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