Literature DB >> 28911774

Use of Isotopes and Isotope Effects for Investigations of Diiron Oxygenase Mechanisms.

Rahul Banerjee1, Anna J Komor1, John D Lipscomb2.   

Abstract

Isotope effects of four broad and overlapping categories have been applied to the study of the mechanisms of chemical reaction and regulation of nonheme diiron cluster-containing oxygenases. The categories are: (a) mass properties that allow substrate-to-product conversions to be tracked, (b) atomic properties that allow specialized spectroscopies, (c) mass properties that impact primarily vibrational spectroscopies, and (d) bond dissociation energy shifts that permit dynamic isotope effect studies of many types. The application of these categories of isotope effects is illustrated using the soluble methane monooxygenase system and CmlI, which catalyzes the multistep arylamine to arylnitro conversion in the biosynthetic pathway for chloramphenicol.
© 2017 Elsevier Inc. All rights reserved.

Entities:  

Keywords:  (18)O; (57)Fe; Arylamine oxygenase; Chiral ethane; Chloramphenicol; CmlI; Dinuclear iron cluster; Methane monooxygenase; Mössbauer; Oxygen activation; Rapid freeze-quench; Resonance Raman; Stopped flow

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Year:  2017        PMID: 28911774     DOI: 10.1016/bs.mie.2017.07.016

Source DB:  PubMed          Journal:  Methods Enzymol        ISSN: 0076-6879            Impact factor:   1.600


  8 in total

1.  High-Resolution Extended X-ray Absorption Fine Structure Analysis Provides Evidence for a Longer Fe···Fe Distance in the Q Intermediate of Methane Monooxygenase.

Authors:  George E Cutsail; Rahul Banerjee; Ang Zhou; Lawrence Que; John D Lipscomb; Serena DeBeer
Journal:  J Am Chem Soc       Date:  2018-11-16       Impact factor: 15.419

2.  High-Resolution XFEL Structure of the Soluble Methane Monooxygenase Hydroxylase Complex with its Regulatory Component at Ambient Temperature in Two Oxidation States.

Authors:  Vivek Srinivas; Rahul Banerjee; Hugo Lebrette; Jason C Jones; Oskar Aurelius; In-Sik Kim; Cindy C Pham; Sheraz Gul; Kyle D Sutherlin; Asmit Bhowmick; Juliane John; Esra Bozkurt; Thomas Fransson; Pierre Aller; Agata Butryn; Isabel Bogacz; Philipp Simon; Stephen Keable; Alexander Britz; Kensuke Tono; Kyung Sook Kim; Sang-Youn Park; Sang Jae Lee; Jaehyun Park; Roberto Alonso-Mori; Franklin D Fuller; Alexander Batyuk; Aaron S Brewster; Uwe Bergmann; Nicholas K Sauter; Allen M Orville; Vittal K Yachandra; Junko Yano; John D Lipscomb; Jan Kern; Martin Högbom
Journal:  J Am Chem Soc       Date:  2020-08-05       Impact factor: 15.419

3.  Activation of a Non-Heme FeIII -OOH by a Second FeIII to Hydroxylate Strong C-H Bonds: Possible Implications for Soluble Methane Monooxygenase.

Authors:  Subhasree Kal; Lawrence Que
Journal:  Angew Chem Int Ed Engl       Date:  2019-05-09       Impact factor: 15.336

4.  X-ray Crystal Structures of Methane Monooxygenase Hydroxylase Complexes with Variants of Its Regulatory Component: Correlations with Altered Reaction Cycle Dynamics.

Authors:  Jason C Jones; Rahul Banerjee; Manny M Semonis; Ke Shi; Hideki Aihara; John D Lipscomb
Journal:  Biochemistry       Date:  2021-12-15       Impact factor: 3.162

Review 5.  Diiron monooxygenases in natural product biosynthesis.

Authors:  Anna J Komor; Andrew J Jasniewski; Lawrence Que; John D Lipscomb
Journal:  Nat Prod Rep       Date:  2018-07-18       Impact factor: 13.423

6.  Structural Studies of the Methylosinus trichosporium OB3b Soluble Methane Monooxygenase Hydroxylase and Regulatory Component Complex Reveal a Transient Substrate Tunnel.

Authors:  Jason C Jones; Rahul Banerjee; Ke Shi; Hideki Aihara; John D Lipscomb
Journal:  Biochemistry       Date:  2020-07-30       Impact factor: 3.162

7.  Soluble Methane Monooxygenase Component Interactions Monitored by 19F NMR.

Authors:  Jason C Jones; Rahul Banerjee; Ke Shi; Manny M Semonis; Hideki Aihara; William C K Pomerantz; John D Lipscomb
Journal:  Biochemistry       Date:  2021-06-08       Impact factor: 3.321

8.  Determination of the iron(IV) local spin states of the Q intermediate of soluble methane monooxygenase by Kβ X-ray emission spectroscopy.

Authors:  George E Cutsail; Rahul Banerjee; Derek B Rice; Olivia McCubbin Stepanic; John D Lipscomb; Serena DeBeer
Journal:  J Biol Inorg Chem       Date:  2022-08-21       Impact factor: 3.862

  8 in total

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