Literature DB >> 34100595

Soluble Methane Monooxygenase Component Interactions Monitored by 19F NMR.

Jason C Jones, Rahul Banerjee, Ke Shi, Manny M Semonis, Hideki Aihara, William C K Pomerantz, John D Lipscomb.   

Abstract

Soluble methane monooxygenase (sMMO) is a multicomponent metalloenzyme capable of catalyzing the fissure of the C-H bond of methane and the insertion of one atom of oxygen from O2 to yield methanol. Efficient multiple-turnover catalysis occurs only in the presence of all three sMMO protein components: hydroxylase (MMOH), reductase (MMOR), and regulatory protein (MMOB). The complex series of sMMO protein component interactions that regulate the formation and decay of sMMO reaction cycle intermediates is not fully understood. Here, the two tryptophan residues in MMOB and the single tryptophan residue in MMOR are converted to 5-fluorotryptophan (5FW) by expression in defined media containing 5-fluoroindole. In addition, the mechanistically significant N-terminal region of MMOB is 19F-labeled by reaction of the K15C variant with 3-bromo-1,1,1-trifluoroacetone (BTFA). The 5FW and BTFA modifications cause minimal structural perturbation, allowing detailed studies of the interactions with sMMOH using 19F NMR. Resonances from the 275 kDa complexes of sMMOH with 5FW-MMOB and BTFA-K15C-5FW-MMOB are readily detected at 5 μM labeled protein concentration. This approach shows directly that MMOR and MMOB competitively bind to sMMOH with similar KD values, independent of the oxidation state of the sMMOH diiron cluster. These findings suggest a new model for regulation in which the dynamic equilibration of MMOR and MMOB with sMMOH allows a transient formation of key reactive complexes that irreversibly pull the reaction cycle forward. The slow kinetics of exchange of the sMMOH:MMOB complex is proposed to prevent MMOR-mediated reductive quenching of the high-valent reaction cycle intermediate Q before it can react with methane.

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Year:  2021        PMID: 34100595      PMCID: PMC8345336          DOI: 10.1021/acs.biochem.1c00293

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.321


  63 in total

1.  Kinetics and activation thermodynamics of methane monooxygenase compound Q formation and reaction with substrates.

Authors:  B J Brazeau; J D Lipscomb
Journal:  Biochemistry       Date:  2000-11-07       Impact factor: 3.162

2.  2-Fluorotyrosine is a valuable but understudied amino acid for protein-observed 19F NMR.

Authors:  Peter D Ycas; Nicole Wagner; Noelle M Olsen; Riqiang Fu; William C K Pomerantz
Journal:  J Biomol NMR       Date:  2019-11-23       Impact factor: 2.835

3.  Assignments of 19F NMR resonances and exploration of dynamics in a long-chain flavodoxin.

Authors:  Taylor A Varner; Nishya Mohamed-Raseek; Anne-Frances Miller
Journal:  Arch Biochem Biophys       Date:  2021-03-13       Impact factor: 4.013

4.  Redox properties of the hydroxylase component of methane monooxygenase from Methylococcus capsulatus (Bath). Effects of protein B, reductase, and substrate.

Authors:  K E Liu; S J Lippard
Journal:  J Biol Chem       Date:  1991-07-15       Impact factor: 5.157

5.  An accurate method for determination of receptor-ligand and enzyme-inhibitor dissociation constants from displacement curves.

Authors:  A Horovitz; A Levitzki
Journal:  Proc Natl Acad Sci U S A       Date:  1987-10       Impact factor: 11.205

Review 6.  Soluble Methane Monooxygenase.

Authors:  Rahul Banerjee; Jason C Jones; John D Lipscomb
Journal:  Annu Rev Biochem       Date:  2019-01-11       Impact factor: 23.643

7.  Transient intermediates of the methane monooxygenase catalytic cycle.

Authors:  S K Lee; J C Nesheim; J D Lipscomb
Journal:  J Biol Chem       Date:  1993-10-15       Impact factor: 5.157

8.  Structure of T4moF, the Toluene 4-Monooxygenase Ferredoxin Oxidoreductase.

Authors:  Justin F Acheson; Hannah Moseson; Brian G Fox
Journal:  Biochemistry       Date:  2015-09-17       Impact factor: 3.162

9.  Single Turnover Reveals Oxygenated Intermediates in Toluene/o-Xylene Monooxygenase in the Presence of the Native Redox Partners.

Authors:  Alexandria Deliz Liang; Stephen J Lippard
Journal:  J Am Chem Soc       Date:  2015-08-12       Impact factor: 15.419

10.  19F NMR studies on γ-butyrobetaine hydroxylase provide mechanistic insights and suggest a dual inhibition mode.

Authors:  Robert K Leśniak; Anna M Rydzik; Jos J A G Kamps; Amjad Kahn; Timothy D W Claridge; Christopher J Schofield
Journal:  Chem Commun (Camb)       Date:  2019-12-05       Impact factor: 6.222

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  2 in total

1.  X-ray Crystal Structures of Methane Monooxygenase Hydroxylase Complexes with Variants of Its Regulatory Component: Correlations with Altered Reaction Cycle Dynamics.

Authors:  Jason C Jones; Rahul Banerjee; Manny M Semonis; Ke Shi; Hideki Aihara; John D Lipscomb
Journal:  Biochemistry       Date:  2021-12-15       Impact factor: 3.162

2.  Ferritin-Like Proteins: A Conserved Core for a Myriad of Enzyme Complexes.

Authors:  Rahul Banerjee; Vivek Srinivas; Hugo Lebrette
Journal:  Subcell Biochem       Date:  2022
  2 in total

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