Literature DB >> 28901150

Function-Oriented Studies Targeting Pectenotoxin 2: Synthesis of the GH-Ring System and a Structurally Simplified Macrolactone.

Natasha F O'Rourke1, Mu A2, Henry N Higgs2, Alan Eastman2, Glenn C Micalizio1.   

Abstract

A chemical foundation for function-oriented studies of pectenotoxin 2 (PTX2) is described. A synthesis of the bicyclic GH-system, and the design and synthesis of a PTX2-analogue, is presented. While maintaining critical features for actin binding, and lacking the Achilles' heel for the natural product's anticancer activity (the AB-spiroketal), this first-generation analogue did not possess the anticancer properties of PTX2, an observation that indicates the molecular significance of features present in the natural product's CDEF-tetracycle.

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Year:  2017        PMID: 28901150      PMCID: PMC5633828          DOI: 10.1021/acs.orglett.7b02435

Source DB:  PubMed          Journal:  Org Lett        ISSN: 1523-7052            Impact factor:   6.005


Pectenotoxin 2 (PTX2) is an exceedingly scarce marine-derived natural product that has become a target of interest for many chemical synthesis laboratories across the globe due to its potentially valuable anticancer activity and its daunting molecular structure (Figure ).[1] While isolated over 30 years ago in an attempt to identify causative agents of diarrhetic shellfish poisoning,[2] PTX2 has more recently been shown to possess affinity to G-actin, binding to a unique site with respect to other known marine-derived actin-targeting agents, and capping the barbed end without filament severing properties.[3] Distinct from other actin-disrupting agents, PTX2 has been claimed to possess selective toxicity toward p53 mutant and p53 null cancers (including variants that are highly chemoresistant).[4] While this natural product has been embraced as an intriguing challenge for numerous campaigns in total synthesis,[5] parts of its structure define significant liabilities for programs aimed at advancing it as a therapeutically relevant agent. For example, the AB-spiroketal system is known to undergo rapid isomerization to other PTX congeners that have markedly dampened anticancer activity (Figure ). Further, it has been shown that oxidation at C43, or saponification of the macrolactone, results in family members that lack the toxicity profile of PTX2.[6]
Figure 1

Introduction to the pectenotoxins.

Introduction to the pectenotoxins. Structure of PTX2 bound to actin.[3] We have been fascinated by the chemical challenge that members of this natural product class present, and our early efforts established synthetic chemistry capable of addressing the C1–C26 hexacyclic subunit.[7] While we have found this domain to be appealing from an architectural standpoint, the published PTX2–actin structure (Figure ) reveals that this region of the natural product appears to merely cap a shallow hydrophobic surface and engage in a hydrogen bond with actin through the C-ring ketone. In stark contrast, the C32–C40 domain that houses the GH-ring system projects into a narrow hydrophilic pocket and is secured by numerous hydrogen-bond interactions. Here, we describe a concise synthesis of the GH-bicyclic heterocycle of PTX2 and secure chemistry capable of fueling function-oriented studies[8] in the area, delivering macrocyclic PTX2-analogues in ∼20 linear steps from commercially available material.
Figure 2

Structure of PTX2 bound to actin.[3]

At the outset of these studies, it was recognized that the shape of the hydrophobic capping region (C1–C26) is clearly important for toxicity, as acid-mediated equilibration of the C7 acetal results in isomers with markedly dampened toxicity profiles, and hydrolysis of the macrolactone abolishes activity. As a result, PTX2-analogues of interest would retain the critically important GH-ring system, yet offer different hydrophobic macrocycles that could serve to mitigate the acid-triggered deactivation of the natural product (i.e., be devoid of the AB-spiroketal system altogether). Unfortunately, the C31–C40 region of the pectenotoxin structure that contains the GH-bicyclic heterocycle has proven to be quite challenging to prepare, requiring longest linear sequences of ∼21 to >30 chemical steps to establish only 10 backbone carbons.[9] Due to this lack of step ecomony, efforts were first directed at defining a more concise approach to an intermediate containing the GH-bicyclic system. As illustrated in Figure , the substituted heterocycle 1 rose as an early target for synthesis. It was thought that this system could be accessed from substrate-directed functionalization of spiroketal 2. The stereodefined spiroketal 2 was then reasoned to be readily available from the crotylation product of furfuraldehyde (3), through sequential silylation, oxidation, and cyclization processes.
Figure 3

Retrosynthetic strategy for the C30–C40 subunit.

Retrosynthetic strategy for the C30–C40 subunit. The successful execution of this design is illustrated in Figure . Protection of the secondary alcohol of 3 (TBSCl, imidazole) was followed by regioselective hydroboration and oxidation to deliver 4. Subsequent oxidation of the furan with m-CPBA, followed by oxidation with PDC, provided the spiroketal intermediate 2 (dr ≥20:1) in 78% yield for the two-step sequence.[10] With this intermediate in hand, conditions for substrate controlled stereoselective oxidation were explored. While initial attempts at conjugate borylation [B2(pin)2, (PPh3)3RhCl or a variety of copper catalysts] indicated a substantial lack of reactivity of the system, and subsequent attempts at dihydroxylation with OsO4/NMO were not promising, it was later found that treatment with RuCl3/NaIO4 generated a valuable diol intermediate with exquisite levels of stereocontrol.[11] Finally, reductive deoxygenation [SmI2, (CH2OH)2, HMPA] provided the secondary alcohol 5 in 82% yield (dr ≥20:1).[12]
Figure 4

Synthesis of the GH-bicyclic domain of the pectenotoxins from the crotylation product of furfuraldehyde.

Synthesis of the GH-bicyclic domain of the pectenotoxins from the crotylation product of furfuraldehyde. Installation of the tetrahydrofuran and alkyne motif of 1 was accomplished by semireduction of the lactone with DIBALH and Wittig reaction of the intermediate lactol with ylide 6.[13] Enyne 7 was then stereoselectively epoxidized to furnish 9,[14] which was immediately used in a stereoretentive ring-closing event via BF3·OEt2-mediated cyclization of the intermediate Co-complexed alkyne.[15] Finally, selective desilylation of the TMS-alkyne and protection of the G-ring secondary alcohol as its corresponding TES ether delivered the fully functionalized bicyclic target 1. Notably, this reaction sequence proceeds in just 14 steps from furfural and has been employed to generate multigram quantities of this critically important PTX2-fragment. With a route to the GH-system secured, we focused our attention on establishing a general chemical synthesis pathway capable of fueling function-oriented[8] studies. These efforts began by defining a model substrate to guide our chemical efforts. For this, we employed a combination of molecular modeling and in silico docking studies to arrive at a reasonable first-generation synthetic target. First, PTX2 was docked to G-actin using AutoDock.[16] To our delight, this in silico experiment resulted in a predicted PTX2–actin structure that resembled the known PTX2–actin complex (Figure A vs Figure ). Further in silico studies predicted that a simple enyne-derivative of PTX2 would associate with actin in a similar manner as the natural product (Figure B), and that the drastically simplified macrolactone 10 could be a good starting point for function-oriented pursuits (Figure C). In this latter case, however, notable differences in the “docked” structure include a flipping of the H-ring in the hydrophilic pocket to more closely resemble that seen in the actual PTX2–actin structure (Figure ), and a lack of functionality in the C3–C26 PTX2-prosthetic capable of achieving a hydrogen bond similar to that seen with the natural product’s C-ring ketone. Despite these variations, and an uncertainty regarding the significance of docking scores produced from AutoDock for the analysis of complex macrocyclic species like pectenotoxin 2, we moved forward with 10 as a target to drive the development of a general pathway to synthetic PTX2-inspired agents.
Figure 5

In silico docking experiments for design of a first-generation PTX2-inspired agent.

In silico docking experiments for design of a first-generation PTX2-inspired agent. As depicted in Figure A, synthesis of 10 was reasoned to be possible by macrolactonization of seco-acid 11, a compound deemed to be readily available from the coupling of 1 to the triaryl-ether fragment 12. Synthesis of 12 was accomplished as depicted in Figure B and proceeded by stepwise homologation of 1,4-bis(bromomethyl)benzene 13. Sequential nucleophilic displacement, first with the anion of 4-hydroxybenzyl alcohol and then with the phenoxide of 14, was effective for generating gram quantities of the desymmetrized benzylic alcohol 15. Oxidation to the corresponding aldehyde (MnO2, PhH), followed by stereoselective propargylation[17] and silylation of the resulting homopropargylic alcohol, gave 17 (dr = 10:1). Regioselective hydrostannylation[18] of the internal alkyne (n-Bu3SnH, PCy3, Pd(OAc)2) was followed by conversion to the vinyl iodide 18 (I2, CH2Cl2).[19] Selective desilylation of the primary silyl ether (CSA, CH2Cl2–MeOH), oxidation to the aldehyde (MnO2, CH2Cl2), and subsequent catalytic anti-Evans’ aldol reaction with 19 generated 20 in 65% yield over the three steps.[20] Finally, conversion of 20 to the planned coupling partner 12 was accomplished by cleavage of the TMS ether with citric acid in methanol, protection of the resulting secondary alcohol as a TBS ether, and reduction to the primary alcohol with LiBH4 (72% overall yield for this final three-step sequence).
Figure 6

Establishment of a synthesis pathway capable of fueling function-oriented studies: convergent assembly of a PTX2-inspired agent.

Establishment of a synthesis pathway capable of fueling function-oriented studies: convergent assembly of a PTX2-inspired agent. With gram quantities of 1 and 12 in hand, effort was directed toward completing the synthesis of PTX2-analogue 10. As illustrated in Figure C, Sonogashira coupling[21] was highly effective for uniting the two fragments (89% yield). Sequential oxidation to the carboxylic acid and selective deprotection of the TES ether then delivered seco-acid 11. To our delight, cyclization under the conditions of Yamaguchi[22] was effective for generating the macrolactone, and a simple two-step deprotection sequence converted the intermediate macrolactone to 10 in 82% yield. With chemistry established to advance the synthetic GH-system 1 to a macrocyclic analogue of PTX2 in just six additional linear transformations, we elected to explore the anticancer and actin-perturbing properties of this first-generation analogue. While docking studies suggested that 10 was capable of mimicking the binding of PTX2 to actin, dosing of this compound in four different human cancer cell lines (MDA-MB-231, MALME, HT29, and H522) at concentrations up to 10 μM led to no observable inhibition of growth. While this lack of cellular activity could be related to distinct permeability characteristics of the synthetic ligand, biochemical assessment of macrolactone 10’s action on actin polymerization led to similar results (no effect was seen up to a concentration of 10 μM). At this early stage, it is apparent that the drastic alteration of the natural product’s C1–C26 domain in 10 abolishes actin-targeting properties and that future analogue design should target congeners that retain additional natural product-inspired complexity in this region. Given our earlier success in preparing PTX2’s CDEF-tetracycle, we look forward to integrating this subunit into second-generation analogues. Overall, a step-economical pathway for synthesis of the GH-bicyclic heterocycle of the pectenotoxins has been established that proceeds in 33% to >53% fewer steps than previously described synthetic routes. This new synthetic pathway was used to prepare multiple grams of the GH-system (1), and a simple six-step sequence was identified for advancing this intermediate to a fully functionalized PTX2-analogue. While this chemical achievement delivered the first PTX2-analogue (10) for evaluation in function-oriented studies, this agent was found to possess diminished activities in comparison to the natural product (actin depolymerization and cytotoxicity). In short, preliminary docking studies proved ineffective as a tool to guide the design of a functional first-generation analogue, and it has been concluded that additional molecular complexity to mimic the C1–C26 region of the natural product may be useful in identifying synthetic analogues with natural product-like activity. Studies along these lines are currently underway.
  34 in total

1.  Synthetic studies toward pectenotoxin 2. Part I. Stereocontrolled access to the C10-C22 fragment.

Authors:  Jatta E Aho; Elina Salomäki; Kari Rissanen; Petri M Pihko
Journal:  Org Lett       Date:  2008-09-03       Impact factor: 6.005

Review 2.  Toward the ideal synthesis and molecular function through synthesis-informed design.

Authors:  Paul A Wender
Journal:  Nat Prod Rep       Date:  2014-03-03       Impact factor: 13.423

3.  Pectenotoxin-2 synthetic studies. 2. Construction and conjoining of ABC and DE Eastern hemisphere subtargets.

Authors:  Dmitriy Bondar; Jian Liu; Thomas Müller; Leo A Paquette
Journal:  Org Lett       Date:  2005-04-28       Impact factor: 6.005

4.  Induction of apoptosis by pectenotoxin-2 is mediated with the induction of DR4/DR5, Egr-1 and NAG-1, activation of caspases and modulation of the Bcl-2 family in p53-deficient Hep3B hepatocellular carcinoma cells.

Authors:  Dong Yeok Shin; Gi Young Kim; Nam Deuk Kim; Jee Hyung Jung; Se-Kwon Kim; Ho Sung Kang; Yung Hyun Choi
Journal:  Oncol Rep       Date:  2008-02       Impact factor: 3.906

Review 5.  The RuO4-catalysed dihydroxylation, ketohydroxylation and mono oxidation--novel oxidation reactions for the synthesis of diols and alpha-hydroxy ketones.

Authors:  Bernd Plietker; Meike Niggemann
Journal:  Org Biomol Chem       Date:  2004-08-05       Impact factor: 3.876

6.  Deregulation of Cdk2 causes Bim-mediated apoptosis in p53-deficient tumors following actin damage.

Authors:  H D Chae; B M Kim; U J Yun; D Y Shin
Journal:  Oncogene       Date:  2008-03-17       Impact factor: 9.867

7.  Construction of a C(30-38) dioxabicyclo[3.2.1]octane subtarget for (+)-sorangicin A, exploiting a regio- and stereocontrolled acid-catalyzed epoxide ring opening.

Authors:  Amos B Smith; Richard J Fox
Journal:  Org Lett       Date:  2004-04-29       Impact factor: 6.005

8.  Lactone ring of pectenotoxins: a key factor for their activity on cytoskeletal dynamics.

Authors:  Isabel R Ares; M Carmen Louzao; Begoña Espiña; Mercedes R Vieytes; Christopher O Miles; Takeshi Yasumoto; Luis M Botana
Journal:  Cell Physiol Biochem       Date:  2007

9.  A spirodiepoxide-based strategy to the A-B ring system of pectenotoxin 4.

Authors:  Stephen D Lotesta; Yongquan Hou; Lawrence J Williams
Journal:  Org Lett       Date:  2007-02-08       Impact factor: 6.005

Review 10.  Dinoflagellate polyether within the yessotoxin, pectenotoxin and okadaic acid toxin groups: characterization, analysis and human health implications.

Authors:  Humberto J Dominguez; Beatriz Paz; Antonio H Daranas; Manuel Norte; José M Franco; José J Fernández
Journal:  Toxicon       Date:  2009-11-17       Impact factor: 3.033

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