Literature DB >> 28900789

Gradient reconstitution of membrane proteins for solid-state NMR studies.

Denis Lacabanne1, Alons Lends2, Clément Danis1, Britta Kunert1, Marie-Laure Fogeron1, Vlastimil Jirasko2, Claire Chuilon1, Lauriane Lecoq1, Cédric Orelle1, Vincent Chaptal1, Pierre Falson1, Jean-Michel Jault1, Beat H Meier3, Anja Böckmann4.   

Abstract

We here adapted the GRecon method used in electron microscopy studies for membrane protein reconstitution to the needs of solid-state NMR sample preparation. We followed in detail the reconstitution of the ABC transporter BmrA by dialysis as a reference, and established optimal reconstitution conditions using the combined sucrose/cyclodextrin/lipid gradient characterizing GRecon. We established conditions under which quantitative reconstitution of active protein at low lipid-to-protein ratios can be obtained, and also how to upscale these conditions in order to produce adequate amounts for NMR. NMR spectra recorded on a sample produced by GRecon showed a highly similar fingerprint as those recorded previously on samples reconstituted by dialysis. GRecon sample preparation presents a gain in time of nearly an order of magnitude for reconstitution, and shall represent a valuable alternative in solid-state NMR membrane protein sample preparation.

Entities:  

Keywords:  ABC-transporter; BmrA; Membrane proteins reconstitution; Solid-state NMR

Mesh:

Substances:

Year:  2017        PMID: 28900789     DOI: 10.1007/s10858-017-0135-4

Source DB:  PubMed          Journal:  J Biomol NMR        ISSN: 0925-2738            Impact factor:   2.835


  26 in total

1.  Properties and identification of human protein drug targets.

Authors:  Tala M Bakheet; Andrew J Doig
Journal:  Bioinformatics       Date:  2009-01-21       Impact factor: 6.937

2.  Membrane protein stability can be compromised by detergent interactions with the extramembranous soluble domains.

Authors:  Zhengrong Yang; Chi Wang; Qingxian Zhou; Jianli An; Ellen Hildebrandt; Luba A Aleksandrov; John C Kappes; Lawrence J DeLucas; John R Riordan; Ina L Urbatsch; John F Hunt; Christie G Brouillette
Journal:  Protein Sci       Date:  2014-05-03       Impact factor: 6.725

3.  Characterization of different water pools in solid-state NMR protein samples.

Authors:  Anja Böckmann; Carole Gardiennet; René Verel; Andreas Hunkeler; Antoine Loquet; Guido Pintacuda; Lyndon Emsley; Beat H Meier; Anne Lesage
Journal:  J Biomol NMR       Date:  2009-11       Impact factor: 2.835

Review 4.  Recent advances in magic angle spinning solid state NMR of membrane proteins.

Authors:  Shenlin Wang; Vladimir Ladizhansky
Journal:  Prog Nucl Magn Reson Spectrosc       Date:  2014-07-26       Impact factor: 9.795

5.  De novo 3D structure determination from sub-milligram protein samples by solid-state 100 kHz MAS NMR spectroscopy.

Authors:  Vipin Agarwal; Susanne Penzel; Kathrin Szekely; Riccardo Cadalbert; Emilie Testori; Andres Oss; Jaan Past; Ago Samoson; Matthias Ernst; Anja Böckmann; Beat H Meier
Journal:  Angew Chem Int Ed Engl       Date:  2014-09-15       Impact factor: 15.336

6.  Conformational change induced by ATP binding in the multidrug ATP-binding cassette transporter BmrA.

Authors:  Cédric Orelle; Francesca Gubellini; Anne Durand; Sergio Marco; Daniel Lévy; Philippe Gros; Attilio Di Pietro; Jean-Michel Jault
Journal:  Biochemistry       Date:  2008-01-24       Impact factor: 3.162

7.  ATPase activity of the MsbA lipid flippase of Escherichia coli.

Authors:  William T Doerrler; Christian R H Raetz
Journal:  J Biol Chem       Date:  2002-07-15       Impact factor: 5.157

8.  Membrane solubilization by detergent: use of brominated phospholipids to evaluate the detergent-induced changes in Ca2+-ATPase/lipid interaction.

Authors:  B de Foresta; M le Maire; S Orlowski; P Champeil; S Lund; J V Møller; F Michelangeli; A G Lee
Journal:  Biochemistry       Date:  1989-03-21       Impact factor: 3.162

9.  Efficient and stable reconstitution of the ABC transporter BmrA for solid-state NMR studies.

Authors:  Britta Kunert; Carole Gardiennet; Denis Lacabanne; Daniel Calles-Garcia; Pierre Falson; Jean-Michel Jault; Beat H Meier; François Penin; Anja Böckmann
Journal:  Front Mol Biosci       Date:  2014-06-12

10.  Quantification of Detergents Complexed with Membrane Proteins.

Authors:  Vincent Chaptal; Frédéric Delolme; Arnaud Kilburg; Sandrine Magnard; Cédric Montigny; Martin Picard; Charlène Prier; Luca Monticelli; Olivier Bornert; Morgane Agez; Stéphanie Ravaud; Cédric Orelle; Renaud Wagner; Anass Jawhari; Isabelle Broutin; Eva Pebay-Peyroula; Jean-Michel Jault; H Ronald Kaback; Marc le Maire; Pierre Falson
Journal:  Sci Rep       Date:  2017-02-08       Impact factor: 4.379

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  8 in total

1.  Solid-State NMR Reveals Asymmetric ATP Hydrolysis in the Multidrug ABC Transporter BmrA.

Authors:  Denis Lacabanne; Thomas Wiegand; Margot Di Cesare; Cédric Orelle; Matthias Ernst; Jean-Michel Jault; Beat H Meier; Anja Böckmann
Journal:  J Am Chem Soc       Date:  2022-07-01       Impact factor: 16.383

2.  Proton-Detected Solid-State NMR of the Cell-Free Synthesized α-Helical Transmembrane Protein NS4B from Hepatitis C Virus.

Authors:  Vlastimil Jirasko; Nils-Alexander Lakomek; Susanne Penzel; Marie-Laure Fogeron; Ralf Bartenschlager; Beat H Meier; Anja Böckmann
Journal:  Chembiochem       Date:  2020-02-20       Impact factor: 3.164

3.  Functionality of membrane proteins overexpressed and purified from E. coli is highly dependent upon the strain.

Authors:  Khadija Mathieu; Waqas Javed; Sylvain Vallet; Christian Lesterlin; Marie-Pierre Candusso; Feng Ding; Xiaohong Nancy Xu; Christine Ebel; Jean-Michel Jault; Cédric Orelle
Journal:  Sci Rep       Date:  2019-02-25       Impact factor: 4.379

4.  Flexible-to-rigid transition is central for substrate transport in the ABC transporter BmrA from Bacillus subtilis.

Authors:  Denis Lacabanne; Cédric Orelle; Lauriane Lecoq; Britta Kunert; Claire Chuilon; Thomas Wiegand; Stéphanie Ravaud; Jean-Michel Jault; Beat H Meier; Anja Böckmann
Journal:  Commun Biol       Date:  2019-04-29

Review 5.  Easy Synthesis of Complex Biomolecular Assemblies: Wheat Germ Cell-Free Protein Expression in Structural Biology.

Authors:  Marie-Laure Fogeron; Lauriane Lecoq; Laura Cole; Matthias Harbers; Anja Böckmann
Journal:  Front Mol Biosci       Date:  2021-03-25

Review 6.  Solid-State NMR for Studying the Structure and Dynamics of Viral Assemblies.

Authors:  Lauriane Lecoq; Marie-Laure Fogeron; Beat H Meier; Michael Nassal; Anja Böckmann
Journal:  Viruses       Date:  2020-09-24       Impact factor: 5.048

Review 7.  ATP Analogues for Structural Investigations: Case Studies of a DnaB Helicase and an ABC Transporter.

Authors:  Denis Lacabanne; Thomas Wiegand; Nino Wili; Maria I Kozlova; Riccardo Cadalbert; Daniel Klose; Armen Y Mulkidjanian; Beat H Meier; Anja Böckmann
Journal:  Molecules       Date:  2020-11-12       Impact factor: 4.411

8.  Myristic Acid Inhibits the Activity of the Bacterial ABC Transporter BmrA.

Authors:  Kristin Oepen; Hüseyin Özbek; Anja Schüffler; Johannes C Liermann; Eckhard Thines; Dirk Schneider
Journal:  Int J Mol Sci       Date:  2021-12-17       Impact factor: 5.923

  8 in total

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