Literature DB >> 28900732

Plant STAND P-loop NTPases: a current perspective of genome distribution, evolution, and function : Plant STAND P-loop NTPases: genomic organization, evolution, and molecular mechanism models contribute broadly to plant pathogen defense.

Preeti Arya1,2,3, Vishal Acharya4,5.   

Abstract

STAND P-loop NTPase is the common weapon used by plant and other organisms from all three kingdoms of life to defend themselves against pathogen invasion. The purpose of this study is to review comprehensively the latest finding of plant STAND P-loop NTPase related to their genomic distribution, evolution, and their mechanism of action. Earlier, the plant STAND P-loop NTPase known to be comprised of only NBS-LRRs/AP-ATPase/NB-ARC ATPase. However, recent finding suggests that genome of early green plants comprised of two types of STAND P-loop NTPases: (1) mammalian NACHT NTPases and (2) NBS-LRRs. Moreover, YchF (unconventional G protein and members of P-loop NTPase) subfamily has been reported to be exceptionally involved in biotic stress (in case of Oryza sativa), thereby a novel member of STAND P-loop NTPase in green plants. The lineage-specific expansion and genome duplication events are responsible for abundance of plant STAND P-loop NTPases; where "moderate tandem and low segmental duplication" trajectory followed in majority of plant species with few exception (equal contribution of tandem and segmental duplication). Since the past decades, systematic research is being investigated into NBS-LRR function supported the direct recognition of pathogen or pathogen effectors by the latest models proposed via 'integrated decoy' or 'sensor domains' model. Here, we integrate the recently published findings together with the previous literature on the genomic distribution, evolution, and distinct models proposed for functional molecular mechanism of plant STAND P-loop NTPases.

Entities:  

Keywords:  Disease-resistance genes; Evolution; Molecular mechanism; NACHT NTPase; Nucleotide-binding site–leucine-rich repeats (NBS–LRRs); STAND P-loop NTPase

Mesh:

Substances:

Year:  2017        PMID: 28900732     DOI: 10.1007/s00438-017-1368-3

Source DB:  PubMed          Journal:  Mol Genet Genomics        ISSN: 1617-4623            Impact factor:   3.291


  112 in total

1.  Plant disease resistance genes encode members of an ancient and diverse protein family within the nucleotide-binding superfamily.

Authors:  B C Meyers; A W Dickerman; R W Michelmore; S Sivaramakrishnan; B W Sobral; N D Young
Journal:  Plant J       Date:  1999-11       Impact factor: 6.417

Review 2.  Preservation of duplicate genes by complementary, degenerative mutations.

Authors:  A Force; M Lynch; F B Pickett; A Amores; Y L Yan; J Postlethwait
Journal:  Genetics       Date:  1999-04       Impact factor: 4.562

3.  Cleavage of Arabidopsis PBS1 by a bacterial type III effector.

Authors:  Feng Shao; Catherine Golstein; Jules Ade; Mark Stoutemyer; Jack E Dixon; Roger W Innes
Journal:  Science       Date:  2003-08-29       Impact factor: 47.728

4.  Genome-wide investigation on the genetic variations of rice disease resistance genes.

Authors:  Sihai Yang; Zhumei Feng; Xiuyan Zhang; Ke Jiang; Xinqing Jin; Yueyu Hang; Jian-Qun Chen; Dacheng Tian
Journal:  Plant Mol Biol       Date:  2006-08-17       Impact factor: 4.076

5.  Direct interaction between the tobacco mosaic virus helicase domain and the ATP-bound resistance protein, N factor during the hypersensitive response in tobacco plants.

Authors:  Hirokazu Ueda; Yube Yamaguchi; Hiroshi Sano
Journal:  Plant Mol Biol       Date:  2006-05       Impact factor: 4.076

Review 6.  Perspectives of genomic diversification and molecular recombination towards R-gene evolution in plants.

Authors:  Raj Kumar Joshi; Sanghamitra Nayak
Journal:  Physiol Mol Biol Plants       Date:  2013-01

7.  A multifaceted genomics approach allows the isolation of the rice Pia-blast resistance gene consisting of two adjacent NBS-LRR protein genes.

Authors:  Yudai Okuyama; Hiroyuki Kanzaki; Akira Abe; Kentaro Yoshida; Muluneh Tamiru; Hiromasa Saitoh; Takahiro Fujibe; Hideo Matsumura; Matt Shenton; Dominique Clark Galam; Jerwin Undan; Akiko Ito; Teruo Sone; Ryohei Terauchi
Journal:  Plant J       Date:  2011-03-07       Impact factor: 6.417

8.  Physical interaction between RRS1-R, a protein conferring resistance to bacterial wilt, and PopP2, a type III effector targeted to the plant nucleus.

Authors:  Laurent Deslandes; Jocelyne Olivier; Nemo Peeters; Dong Xin Feng; Manirath Khounlotham; Christian Boucher; Imre Somssich; Stephane Genin; Yves Marco
Journal:  Proc Natl Acad Sci U S A       Date:  2003-06-03       Impact factor: 11.205

9.  Genome-wide analysis of Carica papaya reveals a small NBS resistance gene family.

Authors:  Brad W Porter; Maya Paidi; Ray Ming; Maqsudul Alam; Wayne T Nishijima; Yun J Zhu
Journal:  Mol Genet Genomics       Date:  2009-03-05       Impact factor: 3.291

10.  An evolutionarily conserved mediator of plant disease resistance gene function is required for normal Arabidopsis development.

Authors:  Ben F Holt; Douglas C Boyes; Mats Ellerström; Nicholas Siefers; Aaron Wiig; Scott Kauffman; Murray R Grant; Jeffery L Dangl
Journal:  Dev Cell       Date:  2002-06       Impact factor: 12.270

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  3 in total

1.  Determination of the Key Resistance Gene Analogs Involved in Ascochyta rabiei Recognition in Chickpea.

Authors:  Ziwei Zhou; Ido Bar; Prabhakaran Thanjavur Sambasivam; Rebecca Ford
Journal:  Front Plant Sci       Date:  2019-05-17       Impact factor: 5.753

2.  The drnf1 Gene from the Drought-Adapted Cyanobacterium Nostoc flagelliforme Improved Salt Tolerance in Transgenic Synechocystis and Arabidopsis Plant.

Authors:  Lijuan Cui; Yinghui Liu; Yiwen Yang; Shuifeng Ye; Hongyi Luo; Baosheng Qiu; Xiang Gao
Journal:  Genes (Basel)       Date:  2018-09-04       Impact factor: 4.096

Review 3.  Regulation and Evolution of NLR Genes: A Close Interconnection for Plant Immunity.

Authors:  Grazia M Borrelli; Elisabetta Mazzucotelli; Daniela Marone; Cristina Crosatti; Vania Michelotti; Giampiero Valè; Anna M Mastrangelo
Journal:  Int J Mol Sci       Date:  2018-06-04       Impact factor: 5.923

  3 in total

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