Literature DB >> 28886303

Helicases as transcription termination factors: Different solutions for a common problem.

Zhong Han1,2, Odil Porrua1.   

Abstract

Helicases are enzymes that remodel nucleic acids or protein-nucleic acid complexes in an ATP-dependent manner. They are ubiquitous and can play many diverse functions related to the metabolism of nucleic acids. A few helicases from both the prokaryotic and the eukaryotic worlds have the ability to induce transcription termination. Here we discuss how the same biological function is achieved by different helicases with quite divergent structures and mechanisms of action.

Entities:  

Keywords:  Mfd; Rho; Sen1; helicases; transcription termination; translocases

Mesh:

Substances:

Year:  2017        PMID: 28886303      PMCID: PMC5927666          DOI: 10.1080/21541264.2017.1361503

Source DB:  PubMed          Journal:  Transcription        ISSN: 2154-1272


  28 in total

1.  Role of DNA bubble rewinding in enzymatic transcription termination.

Authors:  Joo-Seop Park; Jeffrey W Roberts
Journal:  Proc Natl Acad Sci U S A       Date:  2006-03-21       Impact factor: 11.205

2.  Interaction with the nascent RNA is a prerequisite for the recruitment of Rho to the transcription elongation complex in vitro.

Authors:  B Sudha Kalyani; Ghazala Muteeb; M Zuhaib Qayyum; Ranjan Sen
Journal:  J Mol Biol       Date:  2011-09-06       Impact factor: 5.469

3.  Crystal Structure of a Transcribing RNA Polymerase II Complex Reveals a Complete Transcription Bubble.

Authors:  Christopher O Barnes; Monica Calero; Indranil Malik; Brian W Graham; Henrik Spahr; Guowu Lin; Aina E Cohen; Ian S Brown; Qiangmin Zhang; Filippo Pullara; Michael A Trakselis; Craig D Kaplan; Guillermo Calero
Journal:  Mol Cell       Date:  2015-07-16       Impact factor: 17.970

4.  Reconstruction of bacterial transcription-coupled repair at single-molecule resolution.

Authors:  Jun Fan; Mathieu Leroux-Coyau; Nigel J Savery; Terence R Strick
Journal:  Nature       Date:  2016-08-03       Impact factor: 49.962

5.  The 8-nucleotide-long RNA:DNA hybrid is a primary stability determinant of the RNA polymerase II elongation complex.

Authors:  M L Kireeva; N Komissarova; D S Waugh; M Kashlev
Journal:  J Biol Chem       Date:  2000-03-03       Impact factor: 5.157

6.  Saccharomyces cerevisiae Sen1 Helicase Domain Exhibits 5'- to 3'-Helicase Activity with a Preference for Translocation on DNA Rather than RNA.

Authors:  Stephen Martin-Tumasz; David A Brow
Journal:  J Biol Chem       Date:  2015-07-20       Impact factor: 5.157

Review 7.  Senataxin: Genome Guardian at the Interface of Transcription and Neurodegeneration.

Authors:  Matthias Groh; Laura Oana Albulescu; Agnese Cristini; Natalia Gromak
Journal:  J Mol Biol       Date:  2016-10-19       Impact factor: 5.469

8.  Controlling the motor activity of a transcription-repair coupling factor: autoinhibition and the role of RNA polymerase.

Authors:  Abigail J Smith; Mark D Szczelkun; Nigel J Savery
Journal:  Nucleic Acids Res       Date:  2007-02-28       Impact factor: 16.971

9.  Biochemical characterization of the helicase Sen1 provides new insights into the mechanisms of non-coding transcription termination.

Authors:  Zhong Han; Domenico Libri; Odil Porrua
Journal:  Nucleic Acids Res       Date:  2017-02-17       Impact factor: 16.971

10.  Structural basis for bacterial transcription-coupled DNA repair.

Authors:  Alexandra M Deaconescu; Anna L Chambers; Abigail J Smith; Bryce E Nickels; Ann Hochschild; Nigel J Savery; Seth A Darst
Journal:  Cell       Date:  2006-02-10       Impact factor: 41.582

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  2 in total

1.  Mechanism for the Regulated Control of Bacterial Transcription Termination by a Universal Adaptor Protein.

Authors:  Michael R Lawson; Wen Ma; Michael J Bellecourt; Irina Artsimovitch; Andreas Martin; Robert Landick; Klaus Schulten; James M Berger
Journal:  Mol Cell       Date:  2018-08-16       Impact factor: 17.970

2.  An integrated model for termination of RNA polymerase III transcription.

Authors:  Juanjuan Xie; Umberto Aiello; Yves Clement; Nouhou Haidara; Mathias Girbig; Jana Schmitzova; Vladimir Pena; Christoph W Müller; Domenico Libri; Odil Porrua
Journal:  Sci Adv       Date:  2022-07-13       Impact factor: 14.957

  2 in total

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