| Literature DB >> 28881587 |
Camila Maria da Silva Martinelli1,2, André van Helvoort Lengert1,2, Flavio Mavignier Cárcano3,4,2, Eduardo Caetano Albino Silva5,2, Mariana Brait6, Luiz Fernando Lopes4,7,2, Daniel Onofre Vidal1,7,2.
Abstract
Testicular germ cell tumors (TGCT) represent the second main cause of cancer-related death in young men. Despite high cure rates, refractory disease results in poor prognosis. Epigenetic reprogramming occurs during the development of seminomas and non-seminomas. Understanding the molecular and genetic basis of these tumors would represent an important advance in the search for new TGCT molecular markers. Hence the frequency of methylation of a gene panel (VGF, MGMT, ADAMTS1, CALCA, HOXA9, CDKN2B, CDO1 and NANOG) was evaluated in 72 primary TGCT by quantitative methylation specific PCR. A high frequency of MGMT (90.9%, 20/22; p=0.019) and CALCA (90.5%, 19/21; p<0.026) methylation was associated with non-seminomatous tumors while CALCA methylation was also associated with refractory disease (47.4%, 09/19; p=0.005). Moreover, promoter methylation of both genes predicts poor clinical outcome for TGCT patients (5-year EFS: 50.5% vs 77.1%; p=0.032 for MGMT and 51.3% vs 77.0%; p=0.029 for CALCA). The findings of this study indicate that methylation of MGMT and CALCA are frequent and could be used as new molecular markers of prognosis in TGCT.Entities:
Keywords: DNA methylation; biomarkers; prognosis; refractory disease; testicular germ cell tumor
Year: 2016 PMID: 28881587 PMCID: PMC5584175 DOI: 10.18632/oncotarget.11167
Source DB: PubMed Journal: Oncotarget ISSN: 1949-2553
Clinicopathological characteristics of the testicular germ cell tumor patients
| Clinicopathological characteristics | N | % | |
|---|---|---|---|
| <29.6 | 42 | 58.3 | |
| ≥29.6 | 30 | 41.7 | |
| Seminomas | 20 | 27.8 | |
| Non-seminomas | 52 | 72.2 | |
| Seminoma | 20 | 27.8 | |
| Embryonal carcinoma | 10 | 13.9 | |
| Mature teratoma | 01 | 1.4 | |
| Imature Teratoma | 03 | 4.2 | |
| Yolk sac tumor | 05 | 6.9 | |
| Mixed GCT | 33 | 45.8 | |
| I | 10 | 13.9 | |
| IS / II / III | 62 | 86.1 | |
| No | 21 | 29.2 | |
| Yes | 51 | 70.8 | |
| S0 | 05 | 6.9 | |
| S1 | 28 | 38.9 | |
| S2 | 23 | 31.9 | |
| S3 | 04 | 5.6 | |
| SX | 12 | 16.7 | |
| No | 47 | 65.3 | |
| Yes | 15 | 20.8 | |
| No chemotherapy | 07 | 9.7 | |
| Missing | 03 | 4.2 | |
| BEP | 50 | 69.4 | |
| EP | 12 | 16.6 | |
| Carboplatin | 01 | 1.4 | |
| Other | 01 | 1.4 | |
| No chemotherapy | 07 | 9.8 | |
| Missing | 01 | 1.4 | |
| 1 cycle | 03 | 4.7 | |
| 2 cycles | 04 | 6.3 | |
| 3 cycles | 19 | 29.7 | |
| 4 cycles | 37 | 57.8 | |
| Missing | 01 | 1.5 | |
| Good | 40 | 55.5 | |
| Intermediate | 13 | 18.0 | |
| Poor | 6 | 8.3 | |
| Not applicable | 13 | 18.0 |
AJCC: American Joint Committee on Cancer; IGCCCG: International Germ Cell Cancer Cooperative Group.
1 BEP: bleomycin, etoposide and cisplatin; EP: Etoposide and cisplatin.
2 Based on the information of total 64 patients that received chemotherapeutic treatment.
Association of the frequency of CALCA methylation with clinicopathological characteristics of the patients
| Clinicopathological characteristics | p-value | |||
|---|---|---|---|---|
| UnmethylatedN (%) | MethylatedN (%) | |||
| <29.6 | 28 (54.9) | 14 (66.7) | 0.357 | |
| ≥29.6 | 23 (45.1) | 07 (33.3) | ||
| Seminoma | 18 (35.3) | 02 (9.5) | ||
| Non-seminoma | 33 (64.7) | 19 (90.5) | ||
| Seminoma | 18 (35.3) | 02 (9.5) | ||
| Embryonal carcinoma | 05 (9.8) | 05 (23.8) | ||
| Mature teratoma | 01 (2.0) | 0 (0.0) | ||
| Imature teratoma | 02 (3.9) | 01 (4.8) | ||
| Yolk sac tumor | 01 (2.0) | 04 (19.0) | ||
| Mixed GCT | 24 (47.1) | 09 (42.9) | ||
| I | 09 (17.6) | 01 (4.8) | 0.151 | |
| IS / II / III | 42 (82.4) | 20 (95.2) | ||
| No | 17 (33.3) | 04 (19.0) | 0.225 | |
| Yes | 34 (66.7) | 17 (81.0) | ||
| S0 | 05 (11.6) | 0 (0.0) | 0.399 | |
| S1 | 20 (46.5) | 08 (47.1) | ||
| S2 | 16 (37.2) | 07 (41.2) | ||
| S3 | 02 (4.7) | 02 (11.8) | ||
| No | 37 (86.0) | 10 (52.6) | ||
| Yes | 06 (14.0) | 09 (47.4) | ||
| Good | 32 (76.2) | 08 (47.1) | 0.057 | |
| Intermediate | 07 (16.7) | 06 (35.3) | ||
| Poor | 03 (7.1) | 03 (17.6) | ||
Bold p-value: statistically significant; p<0.05.
Association of the frequency of MGMT methylation with clinicopathological characteristics of the patients
| Clinicopathological characteristics | p-value | |||
|---|---|---|---|---|
| UnmethylatedN (%) | MethylatedN (%) | |||
| <29.6 | 27 (54.0) | 15 (68.2) | 0.261 | |
| ≥29.6 | 23 (46.0) | 07 (31.8) | ||
| Seminoma | 18 (36.0) | 02 (9.1) | ||
| Non-seminoma | 32 (64.0) | 20 (90.9) | ||
| Seminoma | 18 (36.0) | 02 (9.1) | 0.115 | |
| Embryonal carcinoma | 06 (12.0) | 04 (18.2) | ||
| Mature teratoma | 01 (2.0) | 0 (0.0) | ||
| Imature teratoma | 01 (2.0) | 02 (9.1) | ||
| Yolk sac tumor | 03 (6.0) | 02 (9.1) | ||
| Mixed GCT | 21 (42.0) | 12 (54.5) | ||
| I | 08 (16.0) | 02 (9.1) | 0.713 | |
| IS / II / III | 42 (84.0) | 20 (90.9) | ||
| No | 14 (28.0) | 7 (31.8) | 0.743 | |
| Yes | 36 (72.0) | 15 (68.2) | ||
| S0 | 03 (7.3) | 02 (10.5) | 0.672 | |
| S1 | 21 (51.2) | 07 (36.8) | ||
| S2 | 15 (36.6) | 08 (42.1) | ||
| S3 | 02 (4.9) | 02 (10.5) | ||
| No | 34 (82.9) | 13 (61.9) | 0.067 | |
| Yes | 07 (17.1) | 08 (38.1) | ||
| Good | 30 (73.2) | 10 (55.6) | 0.134 | |
| Intermediate | 09 (22.0) | 04 (22.2) | ||
| Poor | 02 (4.9) | 04 (22.2) | ||
Bold p-value: statistically significant; p<0.05.
Figure 1Kaplan-Meier survival curves for event-free survival (EFS) regarding methylation of MGMT or CALCA in the TCGT patients
A-B. all TGCT patients; C-D. IGCCCG intermediate and poor risk TGCT patients. The differences between the survival curves were analyzed using the Log-rank test. Statistical significance was considered for p<0.05.