Literature DB >> 28877513

Predicting functional neuroanatomical maps from fusing brain networks with genetic information.

Florian Ganglberger1, Joanna Kaczanowska2, Josef M Penninger3, Andreas Hess4, Katja Bühler5, Wulf Haubensak6.   

Abstract

Functional neuroanatomical maps provide a mesoscale reference framework for studies from molecular to systems neuroscience and psychiatry. The underlying structure-function relationships are typically derived from functional manipulations or imaging approaches. Although highly informative, these are experimentally costly. The increasing amount of publicly available brain and genetic data offers a rich source that could be mined to address this problem computationally. Here, we developed an algorithm that fuses gene expression and connectivity data with functional genetic meta data and exploits cumulative effects to derive neuroanatomical maps related to multi-genic functions. We validated the approach by using public available mouse and human data. The generated neuroanatomical maps recapture known functional anatomical annotations from literature and functional MRI data. When applied to multi-genic meta data from mouse quantitative trait loci (QTL) studies and human neuropsychiatric databases, this method predicted known functional maps underlying behavioral or psychiatric traits. Taken together, genetically weighted connectivity analysis (GWCA) allows for high throughput functional exploration of brain anatomy in silico. It maps functional genetic associations onto brain circuitry for refining functional neuroanatomy, or identifying trait-associated brain circuitry, from genetic data.
Copyright © 2017 The Authors. Published by Elsevier Inc. All rights reserved.

Entities:  

Keywords:  Behavior; Computational analysis; Connectivity; Functional neuroanatomy; Neuroanatomical maps

Mesh:

Year:  2017        PMID: 28877513     DOI: 10.1016/j.neuroimage.2017.08.070

Source DB:  PubMed          Journal:  Neuroimage        ISSN: 1053-8119            Impact factor:   6.556


  7 in total

Review 1.  On the Usage of Brain Atlases in Neuroimaging Research.

Authors:  Andreas Hess; Rukun Hinz; Georgios A Keliris; Philipp Boehm-Sturm
Journal:  Mol Imaging Biol       Date:  2018-10       Impact factor: 3.488

2.  Visualizing and Interpreting Single-Cell Gene Expression Datasets with Similarity Weighted Nonnegative Embedding.

Authors:  Yan Wu; Pablo Tamayo; Kun Zhang
Journal:  Cell Syst       Date:  2018-12-05       Impact factor: 10.304

3.  A Data Structure for Real-Time Aggregation Queries of Big Brain Networks.

Authors:  Florian Johann Ganglberger; Joanna Kaczanowska; Wulf Haubensak; Katja Bühler
Journal:  Neuroinformatics       Date:  2020-01

Review 4.  A Network Neuroscience Approach to Typical and Atypical Brain Development.

Authors:  Sarah E Morgan; Simon R White; Edward T Bullmore; Petra E Vértes
Journal:  Biol Psychiatry Cogn Neurosci Neuroimaging       Date:  2018-03-14

5.  Tinbergen's challenge for the neuroscience of behavior.

Authors:  Donald Pfaff; Inna Tabansky; Wulf Haubensak
Journal:  Proc Natl Acad Sci U S A       Date:  2019-04-29       Impact factor: 11.205

6.  Ten simple rules to create biological network figures for communication.

Authors:  G Elisabeta Marai; Bruno Pinaud; Katja Bühler; Alexander Lex; John H Morris
Journal:  PLoS Comput Biol       Date:  2019-09-26       Impact factor: 4.475

7.  Parcellation of the Human Cerebral Cortex Based on Molecular Targets in the Serotonin System Quantified by Positron Emission Tomography In vivo.

Authors:  Gregory M James; Gregor Gryglewski; Thomas Vanicek; Neydher Berroterán-Infante; Cécile Philippe; Alexander Kautzky; Lukas Nics; Chrysoula Vraka; Godber M Godbersen; Jakob Unterholzner; Helen L Sigurdardottir; Marie Spies; René Seiger; Georg S Kranz; Andreas Hahn; Markus Mitterhauser; Wolfgang Wadsak; Andreas Bauer; Marcus Hacker; Siegfried Kasper; Rupert Lanzenberger
Journal:  Cereb Cortex       Date:  2019-01-01       Impact factor: 5.357

  7 in total

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