Literature DB >> 28876066

Photoactivation of the BLUF Protein PixD Probed by the Site-Specific Incorporation of Fluorotyrosine Residues.

Agnieszka A Gil, Sergey P Laptenok1, James N Iuliano, Andras Lukacs2, Anil Verma3, Christopher R Hall1, Grace E Yoon, Richard Brust, Gregory M Greetham3, Michael Towrie3, Jarrod B French, Stephen R Meech1, Peter J Tonge.   

Abstract

The flavin chromophore in blue-light-using FAD (BLUF) photoreceptors is surrounded by a hydrogen bond network that senses and responds to changes in the electronic structure of the flavin on the ultrafast time scale. The hydrogen bond network includes a strictly conserved Tyr residue, and previously we explored the role of this residue, Y21, in the photoactivation mechanism of the BLUF protein AppABLUF by the introduction of fluorotyrosine (F-Tyr) analogues that modulated the pKa and reduction potential of Y21 by 3.5 pH units and 200 mV, respectively. Although little impact on the forward (dark- to light-adapted form) photoreaction was observed, the change in Y21 pKa led to a 4000-fold increase in the rate of dark-state recovery. In the present work we have extended these studies to the BLUF protein PixD, where, in contrast to AppABLUF, modulation in the Tyr (Y8) pKa has a profound impact on the forward photoreaction. In particular, a decrease in Y8 pKa by 2 or more pH units prevents formation of a stable light state, consistent with a photoactivation mechanism that involves proton transfer or proton-coupled electron transfer from Y8 to the electronically excited FAD. Conversely, the effect of pKa on the rate of dark recovery is markedly reduced in PixD. These observations highlight very significant differences between the photocycles of PixD and AppABLUF, despite their sharing highly conserved FAD binding architectures.

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Year:  2017        PMID: 28876066      PMCID: PMC5647244          DOI: 10.1021/jacs.7b07849

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  55 in total

1.  Light-induced structural changes in a putative blue-light receptor with a novel FAD binding fold sensor of blue-light using FAD (BLUF); Slr1694 of synechocystis sp. PCC6803.

Authors:  Shinji Masuda; Koji Hasegawa; Asako Ishii; Taka-aki Ono
Journal:  Biochemistry       Date:  2004-05-11       Impact factor: 3.162

2.  Spectroscopic analysis of the dark relaxation process of a photocycle in a sensor of blue light using FAD (BLUF) protein Slr1694 of the cyanobacterium Synechocystis sp. PCC6803.

Authors:  Koji Hasegawa; Shinji Masuda; Taka-Aki Ono
Journal:  Plant Cell Physiol       Date:  2005-01-19       Impact factor: 4.927

3.  The hydrogen-bond switch reaction of the Blrb Bluf domain of Rhodobacter sphaeroides.

Authors:  Tilo Mathes; Ivo H M van Stokkum; Cosimo Bonetti; Peter Hegemann; John T M Kennis
Journal:  J Phys Chem B       Date:  2011-05-31       Impact factor: 2.991

Review 4.  Light detection and signal transduction in the BLUF photoreceptors.

Authors:  Shinji Masuda
Journal:  Plant Cell Physiol       Date:  2012-12-14       Impact factor: 4.927

5.  Structure of a novel photoreceptor, the BLUF domain of AppA from Rhodobacter sphaeroides.

Authors:  Spencer Anderson; Vladimira Dragnea; Shinji Masuda; Joel Ybe; Keith Moffat; Carl Bauer
Journal:  Biochemistry       Date:  2005-06-07       Impact factor: 3.162

Review 6.  Introduction: flavoprotein structure and mechanism.

Authors:  V Massey
Journal:  FASEB J       Date:  1995-04       Impact factor: 5.191

7.  Ultrafast infrared spectroscopy of an isotope-labeled photoactivatable flavoprotein.

Authors:  Allison Haigney; Andras Lukacs; Rui-Kun Zhao; Allison L Stelling; Richard Brust; Ryu-Ryun Kim; Minako Kondo; Ian Clark; Michael Towrie; Gregory M Greetham; Boris Illarionov; Adelbert Bacher; Werner Römisch-Margl; Markus Fischer; Stephen R Meech; Peter J Tonge
Journal:  Biochemistry       Date:  2011-02-04       Impact factor: 3.162

8.  Molecular models predict light-induced glutamine tautomerization in BLUF photoreceptors.

Authors:  Tatiana Domratcheva; Bella L Grigorenko; Ilme Schlichting; Alexander V Nemukhin
Journal:  Biophys J       Date:  2008-02-08       Impact factor: 4.033

9.  BLUF domain function does not require a metastable radical intermediate state.

Authors:  Andras Lukacs; Richard Brust; Allison Haigney; Sergey P Laptenok; Kiri Addison; Agnieszka Gil; Michael Towrie; Gregory M Greetham; Peter J Tonge; Stephen R Meech
Journal:  J Am Chem Soc       Date:  2014-03-13       Impact factor: 15.419

10.  Evidence for Tautomerisation of Glutamine in BLUF Blue Light Receptors by Vibrational Spectroscopy and Computational Chemistry.

Authors:  Tatiana Domratcheva; Elisabeth Hartmann; Ilme Schlichting; Tilman Kottke
Journal:  Sci Rep       Date:  2016-03-07       Impact factor: 4.379

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  11 in total

1.  Tuning Radical Relay Residues by Proton Management Rescues Protein Electron Hopping.

Authors:  Estella F Yee; Boris Dzikovski; Brian R Crane
Journal:  J Am Chem Soc       Date:  2019-10-28       Impact factor: 15.419

2.  Formation of an unusual glutamine tautomer in a blue light using flavin photocycle characterizes the light-adapted state.

Authors:  Joshua J Goings; Pengfei Li; Qiwen Zhu; Sharon Hammes-Schiffer
Journal:  Proc Natl Acad Sci U S A       Date:  2020-10-09       Impact factor: 11.205

3.  Constructing Molecular π-Orbital Active Spaces for Multireference Calculations of Conjugated Systems.

Authors:  Elvira R Sayfutyarova; Sharon Hammes-Schiffer
Journal:  J Chem Theory Comput       Date:  2019-02-18       Impact factor: 6.006

4.  Computing Proton-Coupled Redox Potentials of Fluorotyrosines in a Protein Environment.

Authors:  Clorice R Reinhardt; Raquel Sequeira; Cecilia Tommos; Sharon Hammes-Schiffer
Journal:  J Phys Chem B       Date:  2020-12-30       Impact factor: 2.991

5.  Excited State Resonance Raman of Flavin Mononucleotide: Comparison of Theory and Experiment.

Authors:  Dale Green; Palas Roy; Christopher R Hall; James N Iuliano; Garth A Jones; Andras Lukacs; Peter J Tonge; Stephen R Meech
Journal:  J Phys Chem A       Date:  2021-07-09       Impact factor: 2.944

Review 6.  Frontiers in Multiscale Modeling of Photoreceptor Proteins.

Authors:  Maria-Andrea Mroginski; Suliman Adam; Gil S Amoyal; Avishai Barnoy; Ana-Nicoleta Bondar; Veniamin A Borin; Jonathan R Church; Tatiana Domratcheva; Bernd Ensing; Francesca Fanelli; Nicolas Ferré; Ofer Filiba; Laura Pedraza-González; Ronald González; Cristina E González-Espinoza; Rajiv K Kar; Lukas Kemmler; Seung Soo Kim; Jacob Kongsted; Anna I Krylov; Yigal Lahav; Michalis Lazaratos; Qays NasserEddin; Isabelle Navizet; Alexander Nemukhin; Massimo Olivucci; Jógvan Magnus Haugaard Olsen; Alberto Pérez de Alba Ortíz; Elisa Pieri; Aditya G Rao; Young Min Rhee; Niccolò Ricardi; Saumik Sen; Ilia A Solov'yov; Luca De Vico; Tomasz A Wesolowski; Christian Wiebeler; Xuchun Yang; Igor Schapiro
Journal:  Photochem Photobiol       Date:  2021-02-13       Impact factor: 3.521

Review 7.  Light-induced chromophore and protein responses and mechanical signal transduction of BLUF proteins.

Authors:  Tomotsumi Fujisawa; Shinji Masuda
Journal:  Biophys Rev       Date:  2017-12-12

8.  Light-based control of metabolic flux through assembly of synthetic organelles.

Authors:  Evan M Zhao; Nathan Suek; Maxwell Z Wilson; Elliot Dine; Nicole L Pannucci; Zemer Gitai; José L Avalos; Jared E Toettcher
Journal:  Nat Chem Biol       Date:  2019-05-13       Impact factor: 15.040

9.  Functional dynamics of a single tryptophan residue in a BLUF protein revealed by fluorescence spectroscopy.

Authors:  Kristof Karadi; Sofia M Kapetanaki; Katalin Raics; Ildiko Pecsi; Robert Kapronczai; Zsuzsanna Fekete; James N Iuliano; Jinnette Tolentino Collado; Agnieszka A Gil; Jozsef Orban; Miklos Nyitrai; Greg M Greetham; Marten H Vos; Peter J Tonge; Stephen R Meech; Andras Lukacs
Journal:  Sci Rep       Date:  2020-02-06       Impact factor: 4.379

10.  Identification of the vibrational marker of tyrosine cation radical using ultrafast transient infrared spectroscopy of flavoprotein systems.

Authors:  Katalin Pirisi; Lipsa Nag; Zsuzsanna Fekete; James N Iuliano; Jinnette Tolentino Collado; Ian P Clark; Ildikó Pécsi; Pierre Sournia; Ursula Liebl; Gregory M Greetham; Peter J Tonge; Stephen R Meech; Marten H Vos; Andras Lukacs
Journal:  Photochem Photobiol Sci       Date:  2021-02-22       Impact factor: 3.982

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