Literature DB >> 28874061

Time-Resolved Resting-State Functional Magnetic Resonance Imaging Analysis: Current Status, Challenges, and New Directions.

Shella Keilholz1, Cesar Caballero-Gaudes2, Peter Bandettini3,4, Gustavo Deco5,6,7,8, Vince Calhoun9,10.   

Abstract

Time-resolved analysis of resting-state functional magnetic resonance imaging (rs-fMRI) data allows researchers to extract more information about brain function than traditional functional connectivity analysis, yet a number of challenges in data analysis and interpretation remain. This article briefly summarizes common methods for time-resolved analysis and presents some of the pressing issues and opportunities in the field. From there, the discussion moves to interpretation of the network dynamics observed with rs-fMRI and the role that rs-fMRI can play in elucidating the large-scale organization of brain activity.

Keywords:  dynamic analysis; dynamic connectivity; network dynamics; time-resolved resting-state fMRI

Mesh：

Year:  2017        PMID： 28874061      PMCID： PMC5653134          DOI： 10.1089/brain.2017.0543

Source DB:  PubMed          Journal:  Brain Connect        ISSN： 2158-0014


  137 in total

Review 1.  The Rediscovery of Slowness: Exploring the Timing of Cognition.

Authors:  Morten L Kringelbach; Anthony R McIntosh; Petra Ritter; Viktor K Jirsa; Gustavo Deco
Journal:  Trends Cogn Sci       Date:  2015-10       Impact factor: 20.229

2.  Dissociated patterns of anti-correlations with dorsal and ventral default-mode networks at rest.

Authors:  Jingyuan E Chen; Gary H Glover; Michael D Greicius; Catie Chang
Journal:  Hum Brain Mapp       Date:  2017-02-02       Impact factor: 5.038

3.  Functional connectivity dynamics: modeling the switching behavior of the resting state.

Authors:  Enrique C A Hansen; Demian Battaglia; Andreas Spiegler; Gustavo Deco; Viktor K Jirsa
Journal:  Neuroimage       Date:  2014-11-10       Impact factor: 6.556

4.  Spatiotemporal dynamics of the brain at rest--exploring EEG microstates as electrophysiological signatures of BOLD resting state networks.

Authors:  Han Yuan; Vadim Zotev; Raquel Phillips; Wayne C Drevets; Jerzy Bodurka
Journal:  Neuroimage       Date:  2012-02-22       Impact factor: 6.556

5.  On spurious and real fluctuations of dynamic functional connectivity during rest.

Authors:  Nora Leonardi; Dimitri Van De Ville
Journal:  Neuroimage       Date:  2014-09-16       Impact factor: 6.556

6.  Dynamic fluctuations coincide with periods of high and low modularity in resting-state functional brain networks.

Authors:  Richard F Betzel; Makoto Fukushima; Ye He; Xi-Nian Zuo; Olaf Sporns
Journal:  Neuroimage       Date:  2015-12-11       Impact factor: 6.556

Review 7.  The dynamic functional connectome: State-of-the-art and perspectives.

Authors:  Maria Giulia Preti; Thomas Aw Bolton; Dimitri Van De Ville
Journal:  Neuroimage       Date:  2016-12-26       Impact factor: 6.556

8.  Comparing test-retest reliability of dynamic functional connectivity methods.

Authors:  Ann S Choe; Mary Beth Nebel; Anita D Barber; Jessica R Cohen; Yuting Xu; James J Pekar; Brian Caffo; Martin A Lindquist
Journal:  Neuroimage       Date:  2017-07-05       Impact factor: 6.556

9.  EEG correlates of time-varying BOLD functional connectivity.

Authors:  Catie Chang; Zhongming Liu; Michael C Chen; Xiao Liu; Jeff H Duyn
Journal:  Neuroimage       Date:  2013-01-31       Impact factor: 6.556

10.  Cross-Frequency rs-fMRI Network Connectivity Patterns Manifest Differently for Schizophrenia Patients and Healthy Controls.

Authors:  Robyn L Miller; Maziar Yaesoubi; Vince D Calhoun
Journal:  IEEE Signal Process Lett       Date:  2016-08       Impact factor: 3.109
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  23 in total

1.  Topological Data Analysis of Functional MRI Connectivity in Time and Space Domains.

Authors:  Keri L Anderson; Jeffrey S Anderson; Sourabh Palande; Bei Wang
Journal:  Connect Neuroimaging (2018)       Date:  2018-09-15

2.  Awakening: Predicting external stimulation to force transitions between different brain states.

Authors:  Gustavo Deco; Josephine Cruzat; Joana Cabral; Enzo Tagliazucchi; Helmut Laufs; Nikos K Logothetis; Morten L Kringelbach
Journal:  Proc Natl Acad Sci U S A       Date:  2019-08-19       Impact factor: 11.205

3.  Smooth interpolation of covariance matrices and brain network estimation: Part II.

Authors:  Lipeng Ning
Journal:  IEEE Trans Automat Contr       Date:  2019-07-04       Impact factor: 5.792

4.  Imaging the spontaneous flow of thought: Distinct periods of cognition contribute to dynamic functional connectivity during rest.

Authors:  Javier Gonzalez-Castillo; César Caballero-Gaudes; Natasha Topolski; Daniel A Handwerker; Francisco Pereira; Peter A Bandettini
Journal:  Neuroimage       Date:  2019-08-25       Impact factor: 6.556

5.  A deconvolution algorithm for multi-echo functional MRI: Multi-echo Sparse Paradigm Free Mapping.

Authors:  César Caballero-Gaudes; Stefano Moia; Puja Panwar; Peter A Bandettini; Javier Gonzalez-Castillo
Journal:  Neuroimage       Date:  2019-08-13       Impact factor: 6.556

6.  Sustained versus instantaneous connectivity differentiates cognitive functions of processing speed and episodic memory.

Authors:  Jace B King; Jeffrey S Anderson
Journal:  Hum Brain Mapp       Date:  2018-08-16       Impact factor: 5.038

7.  Large-Scale Circuitry Interactions Upon Earthquake Experiences Revealed by Recurrent Neural Networks.

Authors:  Han Wang; Kun Xie; Zhichao Lian; Yan Cui; Yaowu Chen; Jing Zhang; Leo Xie; Joe Tsien; Tianming Liu
Journal:  IEEE Trans Neural Syst Rehabil Eng       Date:  2018-10-05       Impact factor: 3.802

8.  Recognizing Brain States Using Deep Sparse Recurrent Neural Network.

Authors:  Han Wang; Shijie Zhao; Qinglin Dong; Yan Cui; Yaowu Chen; Junwei Han; Li Xie; Tianming Liu
Journal:  IEEE Trans Med Imaging       Date:  2018-10-23       Impact factor: 10.048

9.  Dissociable plasticity of visual-motor system in functional specialization and flexibility in expert table tennis players.

Authors:  Dazhi Yin; Xuefei Wang; Xiaoyou Zhang; Qiurong Yu; Yu Wei; Qing Cai; Mingxia Fan; Lin Li
Journal:  Brain Struct Funct       Date:  2021-05-26       Impact factor: 3.270

10.  Resting Brain Fluctuations Are Intrinsically Coupled to Visual Response Dynamics.

Authors:  Michaël E Belloy; Jacob Billings; Anzar Abbas; Amrit Kashyap; Wen-Ju Pan; Rukun Hinz; Verdi Vanreusel; Johan Van Audekerke; Annemie Van der Linden; Shella D Keilholz; Marleen Verhoye; Georgios A Keliris
Journal:  Cereb Cortex       Date:  2021-02-05       Impact factor: 5.357
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