| Literature DB >> 28859607 |
Anna Ritah Namuganga1,2, Novel N Chegou3, Paul Mubiri4, Gerhard Walzl3, Harriet Mayanja-Kizza4,5.
Abstract
BACKGROUND: In the search for fast, simple and better ways for diagnosis of tuberculosis (TB), there is need to discover and evaluate new biomarkers that are found in samples other than sputum to determine their effectiveness. This study examined the utility of saliva vis-a-vis serum by evaluating levels of biomarkers found in saliva and serum from TB suspects.Entities:
Keywords: Biomarkers; Quantiferon; Saliva
Mesh:
Substances:
Year: 2017 PMID: 28859607 PMCID: PMC5580300 DOI: 10.1186/s12879-017-2687-z
Source DB: PubMed Journal: BMC Infect Dis ISSN: 1471-2334 Impact factor: 3.090
Participant characteristics
| Variable | All | PTB | No TB | |
|---|---|---|---|---|
| LTBI | Uninfected | |||
| No. of participants | 78 | 39 | 21 | 18 |
| Female | 41(53%) | 17(22%) | 11 (14%) | 13 (17%) |
| HIV positive % | 13 (17%) | 5 (6%) | 2 (3%) | 6 (8%) |
| QFT positive | 57 (73%) | 36 (46%) | 21 (27%) | 0 |
| Abnormal X-ray | 42 (54%) | 34 (44%) | 7 (9%) | 1 (1%) |
Table 1: The distribution of study participants according to their sputum MGIT culture, Quantiferon and X-ray results is shown. All the TB patients were MGIT positive. No TB cases (all MGIT negative) were further classified as LTBI or uninfected individuals based on Quantiferon In Tube results. LTBI latent TB infection, PTB active pulmonary TB disease
Fig. 1Median levels in pg/ml and interquartile ranges for all host markers in all study participants in both serum and saliva samples
Median levels of host markers were significantly different between saliva and serum samples from all participants, regardless of TB disease status
| Marker | Median (pg/ml) Saliva | Median (pg/ml) serum |
|
|---|---|---|---|
| IL-2 | 0.0 (0.0–46.2) | 0.0 (0.0–121.0) | 0.03 |
| IL-5 | 1.6 (0.0–25.0) | 3.6 (0.6–27.5) | <0.0001 |
| IL-6 | 4.9 (2.4–7.8) | 10.17 (6.5–36.3) | <0.0001 |
| G-CSF | 0.0 (0.0–50.1) | 72.5 (52.2–103.7) | <0.0001 |
| GM-CSF | 261.2 (40.4–409.1) | 0.0 (0.0–0.0) | <0.0001 |
| MIP-1a | 1.9 (1.1–2.5) | 6.7 (4.2–35.6) | <0.0001 |
| MIP-1b | 0.0 (0.0–0.0) | 187.1 (114.4–260.4) | <0.0001 |
| VEGF | 1467.2 (678.4–1975) | 154 (0.0–322.2) | <0.0001 |
| TNF-a | 0.0 (0.0–4.8) | 14.8 (8.2–22.5) | <0.0001 |
| IFNg | 0.0 (0.0–13.1 | 44.3 (8.1–60.6) | 0.0003 |
Table 2: Shown are the median marker levels (inter quartile ranges in parenthesis) for markers that were significantly different in serum compared to saliva in all participants, regardless of TB disease status
Median levels of markers were significantly different between saliva and serum for all active pulmonary TB participants
| Marker | Median (pg/ml) Saliva | Median (pg/ml) serum |
|
|---|---|---|---|
| IL-5 | 3.7 (2.7–4.7) | 1.6 (0.6–2.7) | <0.0001 |
| IL-6 | 5.1 (2.4–9.5) | 33.1 (12.9–60.3) | <0.0001 |
| G-CSF | 0.0 (0.0–40.5) | 76.1 (53.2–123.0) | <0.0001 |
| GM-CSF | 257.9 (77.9–428.9) | 0.0 (0.0–0.0) | <0.0001 |
| MIP-1a | 1.9 (1.1–2.6) | 6.41 (4.2–35.6) | <0.0001 |
| MIP-1b | 0.0 (0.0–0.0) | 178.1 (98.7–245.8) | <0.0001 |
| VEGF | 1486 (104–1960) | 224.6 (93.2–654.9) | <0.0001 |
| TNF-a | 0.0 (0.0–8.5) | 19.6 (7.4--26.6) | <0.0001 |
| IFNg | 0.0 (0.0–15.6) | 43.3 (0.94–74.3) | 0.0003 |
Table 3: Shown are the marker levels that are significantly different (median levels and inter quartile ranges (in parenthesis) in serum compared to saliva in only active pulmonary TB participants with Area Under the ROC curve ranging between 0.73–0.97
Median levels of markers were significantly different between saliva and serum for all participants
| Marker | Median (pg/ml) Saliva | Median (pg/ml) serum |
|
|---|---|---|---|
| IL-5 | 3.6 (2.7–4.7) | 1.6 (0.6–2.1) | <0.0001 |
| IL-6 | 4.8 (2.1–5.4) | 6.9 (5.6–9.9) | <0.0001 |
| G-CSF | 0.0 (0.0–53.2) | 72.5 (49.1–97.1) | <0.0001 |
| GM-CSF | 282.2 (36.3–405.5) | 0.0 (0.0–0.0) | <0.0001 |
| MIP-1a | 1.9 (1.3–2.3) | 7.39 (3.9–35.8) | <0.0001 |
| MIP-1b | 0.0 (0.0–0.0) | 201.9 (127.5–297.3) | <0.0001 |
| VEGF | 1368 (550.5–2020) | 57.1 (0–208.6) | <0.0001 |
| TNF-a | 0.0 (0.0–4.3) | 12.7 (8.5–19.1) | <0.0001 |
| IFNg | 0.0 (0.0–7.7) | 15.3 (10.4–52.9) | 0.0003 |
Table 4: Shown are the marker levels that are significantly different (median levels and ranges (in parenthesis) in serum compared to saliva in only participants with other respiratory diseases with Area Under the ROC curve ranging between 0.74–1
Fig. 2Median and inter-quartile ranges (pg/ml) of all 10 markers showing the differences between the active TB group (PTB) and the No PTB group (those with other respiratory diseases; ORD) in serum and saliva of all the study participants
Median levels of the most promising host markers detected in serum samples from patients with active TB group (TB) or ORD group and accuracies in the diagnosis of TB disease
| Groups | TB Vs ORD | |
|---|---|---|
| Marker | IL-6 Serum | VEGF Serum |
| ORD (median pg/ml) | 6.9 (5.6–9.9) | 57.06 (0–208.6) |
| PTB (Median pg/ml) | 33.11 (12.9–60.2) | 224.6 (93.2–654.9) |
|
| <0.0001 | 0.001 |
| AUC | 0.85 | 0.71 |
| Cut off | >36.4 | >573.8 |
| Sensitivity | 46.15 | 28.21 |
| Specificity | 97.44 | 97.44 |
Table 5: Shown are the median and ranges (in parenthesis) levels of serum markers that were significantly different between the TB patients and the group with other respiratory diseases (ORD) and area under the curve (AUC) showing the diagnostic performance of the markers
Median marker levels in saliva between the active PTB group and those with other respiratory infections and area under the curve (AUC) showing diagnostic performance of markers
| Marker | Median (pg/ml) PTB | Median (pg/ml) ORD |
| AUC | Sensitivity | Specificity | Cut off |
|---|---|---|---|---|---|---|---|
| IL-2 | 0.0 (0.0–0.0) | 0.0 (0.0–0.0) | 0.57 | 0.53 | 89.74 | 15.38 | <0.38 |
| IL-5 | 1.6 (0.6–2.1) | 1.6 (0.6–2.1) | 0.52 | 0.54 | 12.82 | 97.44 | <0.12 |
| IL-6 | 5.11 (2.4–9.5) | 4.8 (2.1–6.4) | 0.23 | 0.58 | 25.64 | 89.74 | <2.1 |
| G-CSF | 0.0 (0.0–40.5) | 0.0 (0.0–53.2) | 0.64 | 0.53 | 17.95 | 92.31 | >86.61 |
| GM-CSF | 257.9 (77.9–428.9) | 282.2 (36.3–405.5) | 0.65 | 0.53 | 20.51 | 92.31 | <6.53 |
| MIP-1a | 1.9 (1.1–2.6) | 1.9 (1.3–2.3) | 0.69 | 0.53 | 7.69 | 97.44 | <0.55 |
| MIP-1b | 0.0 (0.0–0.0) | 0.0 (0.0–0.0) | 0.61 | 0.51 | 97.44 | 7.69 | <31.06 |
| VEGF | 1486 (1004–1960) | 1368 (550.5–2020) | 0.24 | 0.58 | 28.21 | 92.31 | <571.3 |
| TNF-a | 0.0 (0.0–8.5) | 0.0 (0.0–4.3) | 0.45 | 0.54 | 84.62 | 33.33 | <5.32 |
| IFNg | 0.0 (0.0–15.6) | 0.0 (0.0–7.7 | 0.18 | 0.57 | 71.79 | 41.03 | <0.47 |
Table 4: Shown are the saliva marker levels (median levels and inter quartile ranges (in parenthesis) comparing active TB (PTB) participants with other respiratory diseases (ORD) with Area Under the ROC curve ranging between 0.51–0.58
Median markers levels in serum and saliva that were significantly different between the active TB group (TB), latent TB infection and uninfected (No TB infection) group
| Groups | PTB vs LTBI | PTB vs HE | LTBI vs HE | |
|---|---|---|---|---|
| Marker | IL-6 Serum | VEGF Serum | IFN-γ saliva | |
| PTB Median pg/ml | 33.11 (12.9–60.3) | 224.6 (93.2–654.9) | 0 (0.0–15.6) | |
| LTBI (median pg/ml) | 7.6 (5.6–10.7) | 57.1 (0.0–230.3) | 0 (0–16.7) | |
| Uninfected (median pg/ml) | 6.7 (4.3–8.7) | 69.8 (0.0–198.9) | 0.0 (0.0–0.0) | |
|
| <0.0001 | 0.001 | 0.03 | 0.04 |
| AUC | 0.85 | 0.71 | 0.65 | 0.66 |
| Cut off | >36.4 | >573.8 | <0.47 | <0.47 |
| Sensitivity | 46.15 | 28.21 | 88.9 | 88.9 |
| Specificity | 97.44 | 97.44 | 41 | 43 |
Table 6: Shown are the median levels of IL-6, VEGF IFN- γ and inter quartile ranges (in parenthesis) for serum markers that were significantly different between the active PTB, latent tuberculosis infection (LTBI) and the HE (No TB) group. Area under the curve (AUC) showing the diagnostic performance of markers
Fig. 3Median and interquartile ranges of all 10 markers showing the differences between the active TB group (PTB), LTBI and the uninfected (No TB) group in serum or saliva of all the study participants
Fig. 4Top: Levels of markers significantly different in the serum samples of pulmonary TB cases and latent TB disease, and below: Level of markers that were significantly different the different TB disease in saliva
Fig. 5ROC curves with p values and Area Under the Curve (AUC) values for those markers that were significantly different in active TB disease and No TB disease
Fig. 6(a) Bar graph showing frequency of analytes in the GDA models generated from combining saliva and serum samples, (b) frequency of analytes in models generated when the data obtained from the host markers detected in saliva only