Literature DB >> 25765104

Defining the needs for next generation assays for tuberculosis.

Claudia M Denkinger1, Sandra V Kik2, Daniela Maria Cirillo3, Martina Casenghi4, Thomas Shinnick5, Karin Weyer6, Chris Gilpin6, Catharina C Boehme7, Marco Schito8, Michael Kimerling9, Madhukar Pai2.   

Abstract

To accelerate the fight against tuberculosis, major diagnostic challenges need to be addressed urgently. Post-2015 targets are unlikely to be met without the use of novel diagnostics that are more accurate and can be used closer to where patients first seek care in affordable diagnostic algorithms. This article describes the efforts by the stakeholder community that led to the identification of the high-priority diagnostic needs in tuberculosis. Subsequently target product profiles for the high-priority diagnostic needs were developed and reviewed in a World Health Organization (WHO)-led consensus meeting. The high-priority diagnostic needs included (1) a sputum-based replacement test for smear-microscopy; (2) a non-sputum-based biomarker test for all forms of tuberculosis, ideally suitable for use at levels below microscopy centers; (3) a simple, low cost triage test for use by first-contact care providers as a rule-out test, ideally suitable for use by community health workers; and (4) a rapid drug susceptibility test for use at the microscopy center level. The developed target product profiles, along with complimentary work presented in this supplement, will help to facilitate the interaction between the tuberculosis community and the diagnostics industry with the goal to lead the way toward the post-2015 global tuberculosis targets.
© The Author 2014. Published by Oxford University Press on behalf of the Infectious Diseases Society of America. All rights reserved. For Permissions, please e-mail: journals.permissions@oup.com.

Entities:  

Keywords:  diagnosis; point-of-care; prioritization; target product profiles; tuberculosis

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Year:  2015        PMID: 25765104      PMCID: PMC4447829          DOI: 10.1093/infdis/jiu821

Source DB:  PubMed          Journal:  J Infect Dis        ISSN: 0022-1899            Impact factor:   5.226


  37 in total

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Authors:  Claudia M Denkinger; Madhukar Pai
Journal:  Lancet Infect Dis       Date:  2011-10-17       Impact factor: 25.071

2.  Which new diagnostics for tuberculosis, and when?

Authors:  Frank Cobelens; Susan van den Hof; Madhukar Pai; S Bertel Squire; Andrew Ramsay; Michael E Kimerling
Journal:  J Infect Dis       Date:  2012-04-03       Impact factor: 5.226

3.  Specimen collection methods in the diagnosis of childhood tuberculosis.

Authors:  B J Marais; M Pai
Journal:  Indian J Med Microbiol       Date:  2006-10       Impact factor: 0.985

4.  Developing and interpreting models to improve diagnostics in developing countries.

Authors:  Federico Girosi; Stuart S Olmsted; Emmett Keeler; Deborah C Hay Burgess; Yee-Wei Lim; Julia E Aledort; Maria E Rafael; Karen A Ricci; Rob Boer; Lee Hilborne; Kathryn Pitkin Derose; Molly V Shea; Christopher M Beighley; Carol A Dahl; Jeffrey Wasserman
Journal:  Nature       Date:  2006-11-23       Impact factor: 49.962

5.  Evaluation of diagnostic tests for infectious diseases: general principles.

Authors:  Shabir Banoo; David Bell; Patrick Bossuyt; Alan Herring; David Mabey; Freddie Poole; Peter G Smith; N Sriram; Chansuda Wongsrichanalai; Ralf Linke; Rick O'Brien; Mark Perkins; Jane Cunningham; Precious Matsoso; Carl Michael Nathanson; Piero Olliaro; Rosanna W Peeling; Andy Ramsay
Journal:  Nat Rev Microbiol       Date:  2010-12       Impact factor: 60.633

6.  Evaluation of tuberculosis diagnostics in children: 1. Proposed clinical case definitions for classification of intrathoracic tuberculosis disease. Consensus from an expert panel.

Authors:  Stephen M Graham; Tahmeed Ahmed; Farhana Amanullah; Renee Browning; Vicky Cardenas; Martina Casenghi; Luis E Cuevas; Marianne Gale; Robert P Gie; Malgosia Grzemska; Ed Handelsman; Mark Hatherill; Anneke C Hesseling; Patrick Jean-Philippe; Beate Kampmann; Sushil Kumar Kabra; Christian Lienhardt; Jennifer Lighter-Fisher; Shabir Madhi; Mamodikoe Makhene; Ben J Marais; David F McNeeley; Heather Menzies; Charles Mitchell; Surbhi Modi; Lynne Mofenson; Philippa Musoke; Sharon Nachman; Clydette Powell; Mona Rigaud; Vanessa Rouzier; Jeffrey R Starke; Soumya Swaminathan; Claire Wingfield
Journal:  J Infect Dis       Date:  2012-03-22       Impact factor: 5.226

7.  Induced sputum versus gastric lavage for microbiological confirmation of pulmonary tuberculosis in infants and young children: a prospective study.

Authors:  Heather J Zar; David Hanslo; Patricia Apolles; George Swingler; Gregory Hussey
Journal:  Lancet       Date:  2005 Jan 8-14       Impact factor: 79.321

Review 8.  A systematic review of rapid diagnostic tests for the detection of tuberculosis infection.

Authors:  J Dinnes; J Deeks; H Kunst; A Gibson; E Cummins; N Waugh; F Drobniewski; A Lalvani
Journal:  Health Technol Assess       Date:  2007-01       Impact factor: 4.014

Review 9.  Time delays in diagnosis of pulmonary tuberculosis: a systematic review of literature.

Authors:  Chandrashekhar T Sreeramareddy; Kishore V Panduru; Joris Menten; J Van den Ende
Journal:  BMC Infect Dis       Date:  2009-06-11       Impact factor: 3.090

10.  Commercial nucleic-acid amplification tests for diagnosis of pulmonary tuberculosis in respiratory specimens: meta-analysis and meta-regression.

Authors:  Daphne I Ling; Laura L Flores; Lee W Riley; Madhukar Pai
Journal:  PLoS One       Date:  2008-02-06       Impact factor: 3.240

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  55 in total

1.  Genome-wide expression for diagnosis of pulmonary tuberculosis: a multicohort analysis.

Authors:  Timothy E Sweeney; Lindsay Braviak; Cristina M Tato; Purvesh Khatri
Journal:  Lancet Respir Med       Date:  2016-02-20       Impact factor: 30.700

2.  Xpert MTB/RIF diagnosis of childhood tuberculosis from sputum and stool samples in a high TB-HIV-prevalent setting.

Authors:  Patrick Orikiriza; Margaret Nansumba; Dan Nyehangane; Mathieu Bastard; Ivan Taremwa Mugisha; Denis Nansera; Juliet Mwanga-Amumpaire; Yap Boum; Elias Kumbakumba; Maryline Bonnet
Journal:  Eur J Clin Microbiol Infect Dis       Date:  2018-05-08       Impact factor: 3.267

3.  Identification of Antibody Targets for Tuberculosis Serology using High-Density Nucleic Acid Programmable Protein Arrays.

Authors:  Lusheng Song; Garrick Wallstrom; Xiaobo Yu; Marika Hopper; Jennifer Van Duine; Jason Steel; Jin Park; Peter Wiktor; Peter Kahn; Al Brunner; Douglas Wilson; Elizabeth R Jenny-Avital; Ji Qiu; Joshua Labaer; D Mitchell Magee; Jacqueline M Achkar
Journal:  Mol Cell Proteomics       Date:  2017-02-21       Impact factor: 5.911

4.  Yield, Efficiency, and Costs of Mass Screening Algorithms for Tuberculosis in Brazilian Prisons.

Authors:  Andrea da Silva Santos; Roberto Dias de Oliveira; Everton Ferreira Lemos; Fabiano Lima; Ted Cohen; Olivia Cords; Leonardo Martinez; Crhistinne Gonçalves; Albert Ko; Jason R Andrews; Julio Croda
Journal:  Clin Infect Dis       Date:  2021-03-01       Impact factor: 9.079

Review 5.  Tuberculosis diagnostics in 2015: landscape, priorities, needs, and prospects.

Authors:  Madhukar Pai; Marco Schito
Journal:  J Infect Dis       Date:  2015-04-01       Impact factor: 5.226

Review 6.  Xpert® MTB/RIF assay for extrapulmonary tuberculosis and rifampicin resistance.

Authors:  Mikashmi Kohli; Ian Schiller; Nandini Dendukuri; Keertan Dheda; Claudia M Denkinger; Samuel G Schumacher; Karen R Steingart
Journal:  Cochrane Database Syst Rev       Date:  2018-08-27

7.  Utilization and Clinical Value of Diagnostic Modalities for Tuberculosis in a High HIV Prevalence Setting.

Authors:  Stephanie Gati; Rhoda Chetty; Douglas Wilson; Jacqueline M Achkar
Journal:  Am J Trop Med Hyg       Date:  2018-06-07       Impact factor: 2.345

8.  Performance of QuantaMatrix Microfluidic Agarose Channel system integrated with mycobacteria growth indicator tube liquid culture.

Authors:  Hyejin Kim; Sangyeop Lee; EunJi Jo; Suyeoun Kim; Haeun Kim; Eun-Geun Kim; Sunghoon Kwon; Soyoun Shin
Journal:  Appl Microbiol Biotechnol       Date:  2021-07-30       Impact factor: 4.813

9.  Multi-country evaluation of RISK6, a 6-gene blood transcriptomic signature, for tuberculosis diagnosis and treatment monitoring.

Authors:  Rim Bayaa; Mame Diarra Bousso Ndiaye; Carole Chedid; Eka Kokhreidze; Nestani Tukvadze; Sayera Banu; Mohammad Khaja Mafij Uddin; Samanta Biswas; Rumana Nasrin; Paulo Ranaivomanana; Antso Hasina Raherinandrasana; Julio Rakotonirina; Voahangy Rasolofo; Giovanni Delogu; Flavio De Maio; Delia Goletti; Hubert Endtz; Florence Ader; Monzer Hamze; Mohamad Bachar Ismail; Stéphane Pouzol; Niaina Rakotosamimanana; Jonathan Hoffmann
Journal:  Sci Rep       Date:  2021-07-01       Impact factor: 4.996

10.  Assessment of CD27 expression on T-cells as a diagnostic and therapeutic tool for patients with smear-negative pulmonary tuberculosis.

Authors:  Haiyun Zhang; Xiaoyan Si; Feifan Xu; Junlin Chen; Yuhao Chen; Xiaopeng Cui; Yongwei Qin
Journal:  BMC Immunol       Date:  2021-06-27       Impact factor: 3.615

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