Literature DB >> 28858339

GUIDES: sgRNA design for loss-of-function screens.

Joshua A Meier1,2,3,4, Feng Zhang1,2, Neville E Sanjana3,4.   

Abstract

Entities:  

Mesh：

Substances：

Year:  2017        PMID： 28858339      PMCID： PMC5870754          DOI： 10.1038/nmeth.4423

Source DB:  PubMed          Journal:  Nat Methods        ISSN： 1548-7091            Impact factor:   28.547


× No keyword cloud information.
  8 in total

Review 1.  High-throughput functional genomics using CRISPR-Cas9.

Authors:  Ophir Shalem; Neville E Sanjana; Feng Zhang
Journal:  Nat Rev Genet       Date:  2015-04-09       Impact factor: 53.242

2.  Alternative Splicing Shapes the Phenotype of a Mutation in BBS8 To Cause Nonsyndromic Retinitis Pigmentosa.

Authors:  Daniel Murphy; Ratnesh Singh; Saravanan Kolandaivelu; Visvanathan Ramamurthy; Peter Stoilov
Journal:  Mol Cell Biol       Date:  2015-03-16       Impact factor: 4.272

3.  Human genomics. The Genotype-Tissue Expression (GTEx) pilot analysis: multitissue gene regulation in humans.

Authors: 
Journal:  Science       Date:  2015-05-07       Impact factor: 47.728

Review 4.  Organizing principles of mammalian nonsense-mediated mRNA decay.

Authors:  Maximilian Wei-Lin Popp; Lynne E Maquat
Journal:  Annu Rev Genet       Date:  2013       Impact factor: 16.830

5.  Discovery of cancer drug targets by CRISPR-Cas9 screening of protein domains.

Authors:  Junwei Shi; Eric Wang; Joseph P Milazzo; Zihua Wang; Justin B Kinney; Christopher R Vakoc
Journal:  Nat Biotechnol       Date:  2015-05-11       Impact factor: 54.908

6.  Optimized sgRNA design to maximize activity and minimize off-target effects of CRISPR-Cas9.

Authors:  John G Doench; Nicolo Fusi; Meagan Sullender; Mudra Hegde; Emma W Vaimberg; Jennifer Listgarten; Katherine F Donovan; Ian Smith; Zuzana Tothova; Craig Wilen; Robert Orchard; Herbert W Virgin; David E Root
Journal:  Nat Biotechnol       Date:  2016-01-18       Impact factor: 54.908

7.  GenomeCRISPR - a database for high-throughput CRISPR/Cas9 screens.

Authors:  Benedikt Rauscher; Florian Heigwer; Marco Breinig; Jan Winter; Michael Boutros
Journal:  Nucleic Acids Res       Date:  2016-10-26       Impact factor: 16.971

8.  The challenge of increasing Pfam coverage of the human proteome.

Authors:  Jaina Mistry; Penny Coggill; Ruth Y Eberhardt; Antonio Deiana; Andrea Giansanti; Robert D Finn; Alex Bateman; Marco Punta
Journal:  Database (Oxford)       Date:  2013-04-19       Impact factor: 3.451
  8 in total
  27 in total

1.  Integrated design, execution, and analysis of arrayed and pooled CRISPR genome-editing experiments.

Authors:  Matthew C Canver; Maximilian Haeussler; Daniel E Bauer; Stuart H Orkin; Neville E Sanjana; Ophir Shalem; Guo-Cheng Yuan; Feng Zhang; Jean-Paul Concordet; Luca Pinello
Journal:  Nat Protoc       Date:  2018-04-12       Impact factor: 13.491

Review 2.  Design and analysis of CRISPR-Cas experiments.

Authors:  Ruth E Hanna; John G Doench
Journal:  Nat Biotechnol       Date:  2020-04-13       Impact factor: 54.908

Review 3.  Am I ready for CRISPR? A user's guide to genetic screens.

Authors:  John G Doench
Journal:  Nat Rev Genet       Date:  2017-12-04       Impact factor: 53.242

Review 4.  CRISPR in cancer biology and therapy.

Authors:  Alyna Katti; Bianca J Diaz; Christina M Caragine; Neville E Sanjana; Lukas E Dow
Journal:  Nat Rev Cancer       Date:  2022-02-22       Impact factor: 60.716

Review 5.  High-throughput methods for genome editing: the more the better.

Authors:  Yong Huang; Meiqi Shang; Tingting Liu; Kejian Wang
Journal:  Plant Physiol       Date:  2022-03-28       Impact factor: 8.340

Review 6.  Tutorial: design and execution of CRISPR in vivo screens.

Authors:  Christian J Braun; Andrés Carbonell Adames; Dieter Saur; Roland Rad
Journal:  Nat Protoc       Date:  2022-07-15       Impact factor: 17.021

7.  Single-cell deletion analyses show control of pro-T cell developmental speed and pathways by Tcf7, Spi1, Gata3, Bcl11a, Erg, and Bcl11b.

Authors:  Wen Zhou; Fan Gao; Maile Romero-Wolf; Suin Jo; Ellen V Rothenberg
Journal:  Sci Immunol       Date:  2022-05-20

8.  A genome-scale screen for synthetic drivers of T cell proliferation.

Authors:  Mateusz Legut; Zoran Gajic; Maria Guarino; Zharko Daniloski; Jahan A Rahman; Xinhe Xue; Congyi Lu; Lu Lu; Eleni P Mimitou; Stephanie Hao; Teresa Davoli; Catherine Diefenbach; Peter Smibert; Neville E Sanjana
Journal:  Nature       Date:  2022-03-16       Impact factor: 69.504

Review 9.  High-Throughput Approaches to Pinpoint Function within the Noncoding Genome.

Authors:  Antonino Montalbano; Matthew C Canver; Neville E Sanjana
Journal:  Mol Cell       Date:  2017-10-05       Impact factor: 17.970

10.  Profiling the genetic determinants of chromatin accessibility with scalable single-cell CRISPR screens.

Authors:  Noa Liscovitch-Brauer; Antonino Montalbano; Jiale Deng; Alejandro Méndez-Mancilla; Hans-Hermann Wessels; Nicholas G Moss; Chia-Yu Kung; Akash Sookdeo; Xinyi Guo; Evan Geller; Suma Jaini; Peter Smibert; Neville E Sanjana
Journal:  Nat Biotechnol       Date:  2021-04-29       Impact factor: 54.908
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.