Literature DB >> 28848016

Development of Methionyl-tRNA Synthetase Inhibitors as Antibiotics for Gram-Positive Bacterial Infections.

Omeed Faghih1, Zhongsheng Zhang2, Ranae M Ranade1, J Robert Gillespie1, Sharon A Creason1, Wenlin Huang2, Sayaka Shibata2, Ximena Barros-Álvarez2,3, Christophe L M J Verlinde2, Wim G J Hol2, Erkang Fan2, Frederick S Buckner4.   

Abstract

Antibiotic-resistant bacteria are widespread and pose a growing threat to human health. New antibiotics acting by novel mechanisms of action are needed to address this challenge. The bacterial methionyl-tRNA synthetase (MetRS) enzyme is essential for protein synthesis, and the type found in Gram-positive bacteria is substantially different from its counterpart found in the mammalian cytoplasm. Both previously published and new selective inhibitors were shown to be highly active against Gram-positive bacteria with MICs of ≤1.3 μg/ml against Staphylococcus, Enterococcus, and Streptococcus strains. Incorporation of radioactive precursors demonstrated that the mechanism of activity was due to the inhibition of protein synthesis. Little activity against Gram-negative bacteria was observed, consistent with the fact that Gram-negative bacterial species contain a different type of MetRS enzyme. The ratio of the MIC to the minimum bactericidal concentration (MBC) was consistent with a bacteriostatic mechanism. The level of protein binding of the compounds was high (>95%), and this translated to a substantial increase in MICs when the compounds were tested in the presence of serum. Despite this, the compounds were very active when they were tested in a Staphylococcus aureus murine thigh infection model. Compounds 1717 and 2144, given by oral gavage, resulted in 3- to 4-log decreases in the bacterial load compared to that in vehicle-treated mice, which was comparable to the results observed with the comparator drugs, vancomycin and linezolid. In summary, the research describes MetRS inhibitors with oral bioavailability that represent a class of compounds acting by a novel mechanism with excellent potential for clinical development.
Copyright © 2017 American Society for Microbiology.

Entities:  

Keywords:  Enterococcus; Gram-positive bacteria; Staphylococcus aureus; antibiotic resistance; drug discovery; methionyl-tRNA synthetase

Mesh:

Substances:

Year:  2017        PMID: 28848016      PMCID: PMC5655057          DOI: 10.1128/AAC.00999-17

Source DB:  PubMed          Journal:  Antimicrob Agents Chemother        ISSN: 0066-4804            Impact factor:   5.191


  43 in total

1.  Inhibition of methionyl-tRNA synthetase by REP8839 and effects of resistance mutations on enzyme activity.

Authors:  Louis S Green; James M Bullard; Wendy Ribble; Frank Dean; David F Ayers; Urs A Ochsner; Nebojsa Janjic; Thale C Jarvis
Journal:  Antimicrob Agents Chemother       Date:  2008-11-17       Impact factor: 5.191

2.  Activities of vancomycin and teicoplanin against penicillin-resistant pneumococci in vitro and in vivo and correlation to pharmacokinetic parameters in the mouse peritonitis model.

Authors:  J D Knudsen; K Fuursted; F Espersen; N Frimodt-Møller
Journal:  Antimicrob Agents Chemother       Date:  1997-09       Impact factor: 5.191

3.  Reversible inhibition of mitochondrial protein synthesis during linezolid-related hyperlactatemia.

Authors:  Glòria Garrabou; Alejandro Soriano; Sònia López; Jordi P Guallar; Marta Giralt; Francesc Villarroya; Jose A Martínez; Jordi Casademont; Francesc Cardellach; Josep Mensa; Oscar Miró
Journal:  Antimicrob Agents Chemother       Date:  2006-12-28       Impact factor: 5.191

4.  Structure-guided design of novel Trypanosoma brucei Methionyl-tRNA synthetase inhibitors.

Authors:  Wenlin Huang; Zhongsheng Zhang; Ximena Barros-Álvarez; Cho Yeow Koh; Ranae M Ranade; J Robert Gillespie; Sharon A Creason; Sayaka Shibata; Christophe L M J Verlinde; Wim G J Hol; Frederick S Buckner; Erkang Fan
Journal:  Eur J Med Chem       Date:  2016-10-14       Impact factor: 6.514

5.  Rational modification of a candidate cancer drug for use against Chagas disease.

Authors:  James M Kraus; Christophe L M J Verlinde; Mandana Karimi; Galina I Lepesheva; Michael H Gelb; Frederick S Buckner
Journal:  J Med Chem       Date:  2009-03-26       Impact factor: 7.446

6.  In vivo antibacterial activity of RWJ-54428, a new cephalosporin with activity against gram-positive bacteria.

Authors:  David C Griffith; Laurie Harford; Robert Williams; Ving J Lee; Michael N Dudley
Journal:  Antimicrob Agents Chemother       Date:  2003-01       Impact factor: 5.191

7.  Variable sensitivity to bacterial methionyl-tRNA synthetase inhibitors reveals subpopulations of Streptococcus pneumoniae with two distinct methionyl-tRNA synthetase genes.

Authors:  Daniel R Gentry; Karen A Ingraham; Michael J Stanhope; Stephen Rittenhouse; Richard L Jarvest; Peter J O'Hanlon; James R Brown; David J Holmes
Journal:  Antimicrob Agents Chemother       Date:  2003-06       Impact factor: 5.191

8.  Identification of potent inhibitors of the Trypanosoma brucei methionyl-tRNA synthetase via high-throughput orthogonal screening.

Authors:  Laura Pedró-Rosa; Frederick S Buckner; Ranae M Ranade; Christina Eberhart; Franck Madoux; J Robert Gillespie; Cho Yeow Koh; Steven Brown; Jacqueline Lohse; Christophe L M Verlinde; Erkang Fan; Thomas Bannister; Louis Scampavia; Wim G J Hol; Timothy Spicer; Peter Hodder
Journal:  J Biomol Screen       Date:  2014-08-27

9.  Conformational restriction of methionyl tRNA synthetase inhibitors leading to analogues with potent inhibition and excellent gram-positive antibacterial activity.

Authors:  Richard L Jarvest; John M Berge; Pamela Brown; Catherine S V Houge-Frydrych; Peter J O'Hanlon; David J McNair; Andrew J Pope; Stephen Rittenhouse
Journal:  Bioorg Med Chem Lett       Date:  2003-04-07       Impact factor: 2.823

10.  Fast, scalable generation of high-quality protein multiple sequence alignments using Clustal Omega.

Authors:  Fabian Sievers; Andreas Wilm; David Dineen; Toby J Gibson; Kevin Karplus; Weizhong Li; Rodrigo Lopez; Hamish McWilliam; Michael Remmert; Johannes Söding; Julie D Thompson; Desmond G Higgins
Journal:  Mol Syst Biol       Date:  2011-10-11       Impact factor: 11.429

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  11 in total

1.  Optimization of Methionyl tRNA-Synthetase Inhibitors for Treatment of Cryptosporidium Infection.

Authors:  Frederick S Buckner; Ranae M Ranade; J Robert Gillespie; Sayaka Shibata; Matthew A Hulverson; Zhongsheng Zhang; Wenlin Huang; Ryan Choi; Christophe L M J Verlinde; Wim G J Hol; Atsuko Ochida; Yuichiro Akao; Robert K M Choy; Wesley C Van Voorhis; Sam L M Arnold; Rajiv S Jumani; Christopher D Huston; Erkang Fan
Journal:  Antimicrob Agents Chemother       Date:  2019-03-27       Impact factor: 5.191

2.  Methionyl-tRNA synthetase inhibitor has potent in vivo activity in a novel Giardia lamblia luciferase murine infection model.

Authors:  Samantha A Michaels; Han-Wei Shih; Bailin Zhang; Edelmar D Navaluna; Zhongsheng Zhang; Ranae M Ranade; J Robert Gillespie; Ethan A Merritt; Erkang Fan; Frederick S Buckner; Alexander R Paredez; Kayode K Ojo
Journal:  J Antimicrob Chemother       Date:  2020-05-01       Impact factor: 5.790

3.  The crystal structure of the drug target Mycobacterium tuberculosis methionyl-tRNA synthetase in complex with a catalytic intermediate.

Authors:  Ximena Barros-Álvarez; Stewart Turley; Ranae M Ranade; J Robert Gillespie; Nicole A Duster; Christophe L M J Verlinde; Erkang Fan; Frederick S Buckner; Wim G J Hol
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2018-03-28       Impact factor: 1.056

4.  Dual-targeted hit identification using pharmacophore screening.

Authors:  Galyna P Volynets; Sergiy A Starosyla; Mariia Yu Rybak; Volodymyr G Bdzhola; Oksana P Kovalenko; Vasyl S Vdovin; Sergiy M Yarmoluk; Michail A Tukalo
Journal:  J Comput Aided Mol Des       Date:  2019-11-06       Impact factor: 3.686

5.  Toward a structome of Acinetobacter baumannii drug targets.

Authors:  Logan M Tillery; Kayleigh F Barrett; David M Dranow; Justin Craig; Roger Shek; Ian Chun; Lynn K Barrett; Isabelle Q Phan; Sandhya Subramanian; Jan Abendroth; Donald D Lorimer; Thomas E Edwards; Wesley C Van Voorhis
Journal:  Protein Sci       Date:  2020-01-20       Impact factor: 6.725

6.  Discovery of an Allosteric Binding Site in Kinetoplastid Methionyl-tRNA Synthetase.

Authors:  Leah S Torrie; David A Robinson; Michael G Thomas; Judith V Hobrath; Sharon M Shepherd; John M Post; Eun-Jung Ko; Rafael Alves Ferreira; Claire J Mackenzie; Karolina Wrobel; Darren P Edwards; Ian H Gilbert; David W Gray; Alan H Fairlamb; Manu De Rycker
Journal:  ACS Infect Dis       Date:  2020-04-28       Impact factor: 5.084

Review 7.  Aminoacyl-tRNA Synthetases as Valuable Targets for Antimicrobial Drug Discovery.

Authors:  Luping Pang; Stephen D Weeks; Arthur Van Aerschot
Journal:  Int J Mol Sci       Date:  2021-02-10       Impact factor: 5.923

8.  Frequencies and characteristics of genome-wide recombination in Streptococcus agalactiae, Streptococcus pyogenes, and Streptococcus suis.

Authors:  Isaiah Paolo A Lee; Cheryl P Andam
Journal:  Sci Rep       Date:  2022-01-27       Impact factor: 4.379

9.  Identifying potential natural inhibitors of Brucella melitensis Methionyl-tRNA synthetase through an in-silico approach.

Authors:  Adekunle Babajide Rowaiye; Akwoba Joseph Ogugua; Gordon Ibeanu; Doofan Bur; Mercy Titilayo Asala; Osaretin Benjamin Ogbeide; Emmanuella Oshiorenimeh Abraham; Hamzah Bundu Usman
Journal:  PLoS Negl Trop Dis       Date:  2022-03-21

Review 10.  A review on the ecotoxicological effect of sulphonamides on aquatic organisms.

Authors:  Jie Zhou; Xiao Yun; Jiting Wang; Qi Li; Yanli Wang
Journal:  Toxicol Rep       Date:  2022-03-29
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