Literature DB >> 28847820

ATM-dependent pathways of chromatin remodelling and oxidative DNA damage responses.

N Daniel Berger1, Fintan K T Stanley1, Shaun Moore1, Aaron A Goodarzi2.   

Abstract

Ataxia-telangiectasia mutated (ATM) is a serine/threonine protein kinase with a master regulatory function in the DNA damage response. In this role, ATM commands a complex biochemical network that signals the presence of oxidative DNA damage, including the dangerous DNA double-strand break, and facilitates subsequent repair. Here, we review the current state of knowledge regarding ATM-dependent chromatin remodelling and epigenomic alterations that are required to maintain genomic integrity in the presence of DNA double-strand breaks and/or oxidative stress. We will focus particularly on the roles of ATM in adjusting nucleosome spacing at sites of unresolved DNA double-strand breaks within complex chromatin environments, and the impact of ATM on preserving the health of cells within the mammalian central nervous system.This article is part of the themed issue 'Chromatin modifiers and remodellers in DNA repair and signalling'.
© 2017 The Author(s).

Entities:  

Keywords:  DNA damage; ataxia-telangiectasia mutated; brain; chromatin; neurodegeneration; oxidative stress

Mesh:

Substances:

Year:  2017        PMID: 28847820      PMCID: PMC5577461          DOI: 10.1098/rstb.2016.0283

Source DB:  PubMed          Journal:  Philos Trans R Soc Lond B Biol Sci        ISSN: 0962-8436            Impact factor:   6.237


  124 in total

1.  Autophosphorylation and ATM activation: additional sites add to the complexity.

Authors:  Sergei V Kozlov; Mark E Graham; Burkhard Jakob; Frank Tobias; Amanda W Kijas; Marcel Tanuji; Philip Chen; Phillip J Robinson; Gisela Taucher-Scholz; Keiji Suzuki; Sairai So; David Chen; Martin F Lavin
Journal:  J Biol Chem       Date:  2010-12-13       Impact factor: 5.157

2.  KAP-1 phosphorylation regulates CHD3 nucleosome remodeling during the DNA double-strand break response.

Authors:  Aaron A Goodarzi; Thomas Kurka; Penelope A Jeggo
Journal:  Nat Struct Mol Biol       Date:  2011-06-05       Impact factor: 15.369

3.  BRCA1 is required for hMLH1 stabilization following doxorubicin-induced DNA damage.

Authors:  Francesco Romeo; Lucia Falbo; Maddalena Di Sanzo; Roberta Misaggi; Maria C Faniello; Giuseppe Viglietto; Giovanni Cuda; Francesco Costanzo; Barbara Quaresima
Journal:  Int J Biochem Cell Biol       Date:  2011-08-16       Impact factor: 5.085

4.  ATM and SIRT6/SNF2H Mediate Transient H2AX Stabilization When DSBs Form by Blocking HUWE1 to Allow Efficient γH2AX Foci Formation.

Authors:  Yuko Atsumi; Yusuke Minakawa; Masaya Ono; Sachiko Dobashi; Keitaro Shinohe; Akira Shinohara; Shunichi Takeda; Masatoshi Takagi; Nobuhiko Takamatsu; Hitoshi Nakagama; Hirobumi Teraoka; Ken-ichi Yoshioka
Journal:  Cell Rep       Date:  2015-12-17       Impact factor: 9.423

5.  Protective roles for ATM in cellular response to oxidative stress.

Authors:  N Takao; Y Li; K Yamamoto
Journal:  FEBS Lett       Date:  2000-04-21       Impact factor: 4.124

6.  Targeted disruption of ATM leads to growth retardation, chromosomal fragmentation during meiosis, immune defects, and thymic lymphoma.

Authors:  Y Xu; T Ashley; E E Brainerd; R T Bronson; M S Meyn; D Baltimore
Journal:  Genes Dev       Date:  1996-10-01       Impact factor: 11.361

7.  Ataxia-telangiectasia: MR and CT findings.

Authors:  L Farina; C Uggetti; A Ottolini; A Martelli; R Bergamaschi; L Sibilla; F Zappoli; M G Egitto; G Lanzi
Journal:  J Comput Assist Tomogr       Date:  1994 Sep-Oct       Impact factor: 1.826

8.  SCAI promotes DNA double-strand break repair in distinct chromosomal contexts.

Authors:  Rebecca Kring Hansen; Andreas Mund; Sara Lund Poulsen; Maria Sandoval; Karolin Klement; Katerina Tsouroula; Maxim A X Tollenaere; Markus Räschle; Rebeca Soria; Stefan Offermanns; Thomas Worzfeld; Robert Grosse; Dominique T Brandt; Björn Rozell; Matthias Mann; Francesca Cole; Evi Soutoglou; Aaron A Goodarzi; Jeremy A Daniel; Niels Mailand; Simon Bekker-Jensen
Journal:  Nat Cell Biol       Date:  2016-11-07       Impact factor: 28.824

Review 9.  Functional interplay between ATM/ATR-mediated DNA damage response and DNA repair pathways in oxidative stress.

Authors:  Shan Yan; Melanie Sorrell; Zachary Berman
Journal:  Cell Mol Life Sci       Date:  2014-06-20       Impact factor: 9.261

Review 10.  Opposing roles of RNF8/RNF168 and deubiquitinating enzymes in ubiquitination-dependent DNA double-strand break response signaling and DNA-repair pathway choice.

Authors:  Shinichiro Nakada
Journal:  J Radiat Res       Date:  2016-03-16       Impact factor: 2.724

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  21 in total

Review 1.  Nucleosome remodelling, DNA repair and transcriptional regulation build negative feedback loops in cancer and cellular ageing.

Authors:  Reiko Watanabe; Shin-Ichiro Kanno; Amaneh Mohammadi Roushandeh; Ayako Ui; Akira Yasui
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2017-10-05       Impact factor: 6.237

Review 2.  Genome maintenance functions of the INO80 chromatin remodeller.

Authors:  Ashby J Morrison
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2017-10-05       Impact factor: 6.237

Review 3.  The tale of a tail: histone H4 acetylation and the repair of DNA breaks.

Authors:  Surbhi Dhar; Ozge Gursoy-Yuzugullu; Ramya Parasuram; Brendan D Price
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2017-10-05       Impact factor: 6.237

4.  Chromatin modifiers and remodellers in DNA repair and signalling.

Authors:  Penny A Jeggo; Jessica A Downs; Susan M Gasser
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2017-10-05       Impact factor: 6.237

Review 5.  Ribosomal Protein S6: A Potential Therapeutic Target against Cancer?

Authors:  Yong Weon Yi; Kyu Sic You; Jeong-Soo Park; Seok-Geun Lee; Yeon-Sun Seong
Journal:  Int J Mol Sci       Date:  2021-12-21       Impact factor: 5.923

6.  DNA Repair Inhibition Leads to Active Export of Repetitive Sequences to the Cytoplasm Triggering an Inflammatory Response.

Authors:  Xuan Song; Jacqueline T M Aw; Fulin Ma; Ming Fung Cheung; Danny Leung; Karl Herrup
Journal:  J Neurosci       Date:  2021-09-30       Impact factor: 6.167

7.  A pleiotropic ATM variant (rs1800057 C>G) is associated with risk of multiple cancers.

Authors:  Danwen Qian; Hongliang Liu; Lingling Zhao; Sheng Luo; Kyle M Walsh; Jiaoti Huang; Chuan-Yuan Li; Qingyi Wei
Journal:  Carcinogenesis       Date:  2022-02-11       Impact factor: 4.741

8.  Transcriptional differences between smokers and non-smokers and variance by obesity as a risk factor for human sensitivity to environmental exposures.

Authors:  Maria Nikodemova; Jeremiah Yee; Patrick R Carney; Christopher A Bradfield; Kristen Mc Malecki
Journal:  Environ Int       Date:  2018-02-16       Impact factor: 9.621

9.  NF1 patient missense variants predict a role for ATM in modifying neurofibroma initiation.

Authors:  Yanan Yu; Kwangmin Choi; Jianqiang Wu; Paul R Andreassen; Phillip J Dexheimer; Mehdi Keddache; Hilde Brems; Robert J Spinner; Jose A Cancelas; Lisa J Martin; Margaret R Wallace; Eric Legius; Kristine S Vogel; Nancy Ratner
Journal:  Acta Neuropathol       Date:  2019-10-29       Impact factor: 17.088

10.  Transcriptional Profiling of Exosomes Derived from Staphylococcus aureus-Infected Bovine Mammary Epithelial Cell Line MAC-T by RNA-Seq Analysis.

Authors:  Yu Chen; Hongyuan Jing; Miaoyu Chen; Wan Liang; Jing Yang; Ganzhen Deng; Mengyao Guo
Journal:  Oxid Med Cell Longev       Date:  2021-07-29       Impact factor: 6.543

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