Literature DB >> 28842743

An improvement of miRNA extraction efficiency in human plasma.

Eunmi Ban1,2, Dong-Kyu Chae1,3, Young Sook Yoo1, Eun Joo Song4.   

Abstract

MicroRNAs (miRNAs) are short noncoding RNA molecules that control the expression of mRNAs associated with various biological processes. Therefore, deregulated miRNAs play important roles in the pathogenesis of diseases. Numerous studies are aimed at discovering biomarkers of diseases or determining miRNA functions by monitoring circulating miRNAs in various biological sources such as plasma and urine. However, the analysis of miRNA in such fluids presents problems related to accuracy and reproducibility because of their low levels in biological fluids. Therefore, better extraction kits and more sensitive detection systems have been developed for improved and reproducible analysis of circulating miRNAs. However, new extraction methods are also needed to improve the yield of miRNAs for their reliable analysis from biological fluids. The combination of yeast transfer RNA (tRNA) and glycogen as carrier molecules and incubation durations were optimized to maximize extraction efficiency. The extraction recovery using a combination of yeast tRNA and glycogen was approximately threefold more than that by using glycogen or yeast tRNA alone. In addition, reproducible and accurate analysis of miRNAs can be carried out after extraction using a combination of yeast tRNA and glycogen without an impact on plasma components. Graphical abstract Steps of miRNA extraction in plasma.

Entities:  

Keywords:  Extraction efficiency; Glycogen; Yeast tRNA; miRNA

Mesh:

Substances:

Year:  2017        PMID: 28842743     DOI: 10.1007/s00216-017-0580-7

Source DB:  PubMed          Journal:  Anal Bioanal Chem        ISSN: 1618-2642            Impact factor:   4.142


  9 in total

Review 1.  Delivery of therapeutic miRNA using polymer-based formulation.

Authors:  Eunmi Ban; Taek-Hyun Kwon; Aeri Kim
Journal:  Drug Deliv Transl Res       Date:  2019-12       Impact factor: 4.617

2.  Electrical potential-assisted DNA-RNA hybridization for rapid microRNA extraction.

Authors:  Xiaoli Zhao; Yong Li; Ritong Sun; Yaofang Fan; Xiaofeng Mu; Ye Wang; Chao Shi; Cuiping Ma
Journal:  Anal Bioanal Chem       Date:  2022-03-01       Impact factor: 4.478

3.  Assessment of RNA extraction protocols from cladocerans.

Authors:  Muhammad Raznisyafiq Razak; Ahmad Zaharin Aris; Fatimah Md Yusoff; Zetty Norhana Balia Yusof; Sang Don Kim; Kyoung Woong Kim
Journal:  PLoS One       Date:  2022-04-26       Impact factor: 3.752

4.  Comparison and optimisation of microRNA extraction from the plasma of healthy pregnant women.

Authors:  Victoria L Parker; Bryony F Cushen; Eleftherios Gavriil; Benjamin Marshall; Sarah Waite; Allan Pacey; Paul R Heath
Journal:  Mol Med Rep       Date:  2021-02-12       Impact factor: 2.952

5.  Identification and Characterization of Serum microRNAs as Biomarkers for Human Disc Degeneration: An RNA Sequencing Analysis.

Authors:  Shangbin Cui; Zhiyu Zhou; Xizhe Liu; Robert Geoff Richards; Mauro Alini; Songlin Peng; Shaoyu Liu; Xuenong Zou; Zhen Li; Sibylle Grad
Journal:  Diagnostics (Basel)       Date:  2020-12-08

Review 6.  Considerations and Suggestions for the Reliable Analysis of miRNA in Plasma Using qRT-PCR.

Authors:  Eunmi Ban; Eun Joo Song
Journal:  Genes (Basel)       Date:  2022-02-10       Impact factor: 4.096

7.  A rapid and reliable CE-LIF method for the quantitative analysis of miRNA-497 in plasma and organs and its application to a pharmacokinetic and biodistribution study.

Authors:  Eunmi Ban; Haejin Kwon; Eun Joo Song
Journal:  RSC Adv       Date:  2020-05-18       Impact factor: 4.036

8.  Altered Expression of miR-575 in Glioma is Related to Tumor Cell Proliferation, Migration, and Invasion.

Authors:  Guangxin Wei; Shengjun Li; Pengcheng Wang; Shouxian Wang; Yujing Zhao
Journal:  Neuromolecular Med       Date:  2021-07-16       Impact factor: 3.843

Review 9.  Isolation of Cell-Free miRNA from Biological Fluids: Influencing Factors and Methods.

Authors:  Olga Bryzgunova; Maria Konoshenko; Ivan Zaporozhchenko; Alexey Yakovlev; Pavel Laktionov
Journal:  Diagnostics (Basel)       Date:  2021-05-11
  9 in total

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