Literature DB >> 28839922

Genetic, epigenetic and exogenetic information in development and evolution.

Paul E Griffiths1.   

Abstract

The idea that development is the expression of information accumulated during evolution and that heredity is the transmission of this information is surprisingly hard to cash out in strict, scientific terms. This paper seeks to do so using the sense of information introduced by Francis Crick in his sequence hypothesis and central dogma of molecular biology. It focuses on Crick's idea of precise determination. This is analysed using an information-theoretic measure of causal specificity. This allows us to reconstruct some of Crick's claims about information in transcription and translation. Crick's approach to information has natural extensions to non-coding regions of DNA, to epigenetic marks, and to the genetic or environmental upstream causes of those epigenetic marks. Epigenetic information cannot be reduced to genetic information. The existence of biological information in epigenetic and exogenetic factors is relevant to evolution as well as to development.

Keywords:  epigenetics; genetic information; specificity

Year:  2017        PMID: 28839922      PMCID: PMC5566810          DOI: 10.1098/rsfs.2016.0152

Source DB:  PubMed          Journal:  Interface Focus        ISSN: 2042-8898            Impact factor:   3.906


  26 in total

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Journal:  Proc Natl Acad Sci U S A       Date:  1999-03-16       Impact factor: 11.205

2.  Deciphering the splicing code.

Authors:  Yoseph Barash; John A Calarco; Weijun Gao; Qun Pan; Xinchen Wang; Ofer Shai; Benjamin J Blencowe; Brendan J Frey
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3.  Optimization of inclusive fitness.

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Journal:  J Theor Biol       Date:  2005-07-25       Impact factor: 2.691

Review 4.  Parental effects in ecology and evolution: mechanisms, processes and implications.

Authors:  Alexander V Badyaev; Tobias Uller
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2009-04-27       Impact factor: 6.237

Review 5.  The extended evolutionary synthesis and the role of soft inheritance in evolution.

Authors:  Thomas E Dickins; Qazi Rahman
Journal:  Proc Biol Sci       Date:  2012-05-16       Impact factor: 5.349

6.  Settling nature and nurture into an ontogenetic niche.

Authors:  M J West; A P King
Journal:  Dev Psychobiol       Date:  1987-09       Impact factor: 3.038

7.  A methyl transferase links the circadian clock to the regulation of alternative splicing.

Authors:  Sabrina E Sanchez; Ezequiel Petrillo; Esteban J Beckwith; Xu Zhang; Matias L Rugnone; C Esteban Hernando; Juan C Cuevas; Micaela A Godoy Herz; Ana Depetris-Chauvin; Craig G Simpson; John W S Brown; Pablo D Cerdán; Justin O Borevitz; Paloma Mas; M Fernanda Ceriani; Alberto R Kornblihtt; Marcelo J Yanovsky
Journal:  Nature       Date:  2010-10-20       Impact factor: 49.962

Review 8.  Epigenetics in alternative pre-mRNA splicing.

Authors:  Reini F Luco; Mariano Allo; Ignacio E Schor; Alberto R Kornblihtt; Tom Misteli
Journal:  Cell       Date:  2011-01-07       Impact factor: 41.582

9.  Evolutionary Theory and the Ultimate-Proximate Distinction in the Human Behavioral Sciences.

Authors:  Thomas C Scott-Phillips; Thomas E Dickins; Stuart A West
Journal:  Perspect Psychol Sci       Date:  2011-02-03

Review 10.  Alternative splicing in plants--coming of age.

Authors:  Naeem H Syed; Maria Kalyna; Yamile Marquez; Andrea Barta; John W S Brown
Journal:  Trends Plant Sci       Date:  2012-06-27       Impact factor: 18.313

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  2 in total

Review 1.  The hierarchically mechanistic mind: an evolutionary systems theory of the human brain, cognition, and behavior.

Authors:  Paul B Badcock; Karl J Friston; Maxwell J D Ramstead; Annemie Ploeger; Jakob Hohwy
Journal:  Cogn Affect Behav Neurosci       Date:  2019-12       Impact factor: 3.282

2.  Why developmental niche construction is not selective niche construction: and why it matters.

Authors:  Karola Stotz
Journal:  Interface Focus       Date:  2017-08-18       Impact factor: 3.906

  2 in total

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