Literature DB >> 28825160

Functional validation of ATF4 and GADD34 in Neuro2a cells by CRISPR/Cas9-mediated genome editing.

Kentaro Oh-Hashi1,2, Naoki Sugiura3, Fumimasa Amaya4, Ken-Ichi Isobe5, Yoko Hirata6,3.   

Abstract

Activating transcription factor 4 (ATF4), which is ubiquitously expressed, plays a crucial role in regulating various stress-responsive genes under pathophysiological conditions. Further, growth arrest and DNA damage-inducible gene 34 (GADD34), a downstream target of ATF4, has been reported to negatively regulate ATF4 expression. To understand the relationship between intrinsic ATF4 and GADD34 under resting and ER stress conditions, we used a novel gene editing approach, CRISPR/Cas9, to integrate antibiotic-resistant genes into the target genes, ATF4 and GADD34. First, we manipulated the ATF4 gene in the mouse neuroblastoma cell line, Neuro2a, and compared the ER stress responses between parental and ATF4-edited Neuro2a cells. Next, we established Neuro2a cells with edited GADD34 and ATF4/GADD34 genes and found that ATF4 acts as a proapoptotic factor, but GADD34 depletion did not attenuate the expression of cleaved caspase-3 induced by tunicamycin treatment. These findings provide new insights into the ATF4 signaling cascades. Additionally, the rapid establishment of cells lacking multiple genes using this CRISPR/Cas9 system will be a powerful tool for exploring various cellular issues under pathophysiological conditions.

Entities:  

Keywords:  ATF4; CRIPSR/Cas9; ER stress; GADD34

Mesh:

Substances:

Year:  2017        PMID: 28825160     DOI: 10.1007/s11010-017-3156-0

Source DB:  PubMed          Journal:  Mol Cell Biochem        ISSN: 0300-8177            Impact factor:   3.396


  36 in total

1.  Isolation and characterization of the hamster gadd153 gene. Activation of promoter activity by agents that damage DNA.

Authors:  J D Luethy; J Fargnoli; J S Park; A J Fornace; N J Holbrook
Journal:  J Biol Chem       Date:  1990-09-25       Impact factor: 5.157

2.  Protein translation and folding are coupled by an endoplasmic-reticulum-resident kinase.

Authors:  H P Harding; Y Zhang; D Ron
Journal:  Nature       Date:  1999-01-21       Impact factor: 49.962

3.  Characterization of a mammalian homolog of the GCN2 eukaryotic initiation factor 2alpha kinase.

Authors:  J J Berlanga; J Santoyo; C De Haro
Journal:  Eur J Biochem       Date:  1999-10

4.  TRB3, a novel ER stress-inducible gene, is induced via ATF4-CHOP pathway and is involved in cell death.

Authors:  Nobumichi Ohoka; Satoshi Yoshii; Takayuki Hattori; Kikuo Onozaki; Hidetoshi Hayashi
Journal:  EMBO J       Date:  2005-03-10       Impact factor: 11.598

Review 5.  Regulation of protein synthesis by heme-regulated eIF-2 alpha kinase.

Authors:  J J Chen; I M London
Journal:  Trends Biochem Sci       Date:  1995-03       Impact factor: 13.807

6.  ER stress-mediated autophagy promotes Myc-dependent transformation and tumor growth.

Authors:  Lori S Hart; John T Cunningham; Tatini Datta; Souvik Dey; Feven Tameire; Stacey L Lehman; Bo Qiu; Haiyan Zhang; George Cerniglia; Meixia Bi; Yan Li; Yan Gao; Huayi Liu; Changhong Li; Amit Maity; Andrei Thomas-Tikhonenko; Alexander E Perl; Albert Koong; Serge Y Fuchs; J Alan Diehl; Ian G Mills; Davide Ruggero; Constantinos Koumenis
Journal:  J Clin Invest       Date:  2012-11-12       Impact factor: 14.808

Review 7.  Roles of CHOP/GADD153 in endoplasmic reticulum stress.

Authors:  S Oyadomari; M Mori
Journal:  Cell Death Differ       Date:  2004-04       Impact factor: 15.828

8.  Role of HERP and a HERP-related protein in HRD1-dependent protein degradation at the endoplasmic reticulum.

Authors:  Chih-Hsiang Huang; Yue-Ru Chu; Yihong Ye; Xin Chen
Journal:  J Biol Chem       Date:  2013-12-23       Impact factor: 5.157

9.  Activating transcription factor 3 is integral to the eukaryotic initiation factor 2 kinase stress response.

Authors:  Hao-Yuan Jiang; Sheree A Wek; Barbara C McGrath; Dan Lu; Tsonwin Hai; Heather P Harding; Xiaozhong Wang; David Ron; Douglas R Cavener; Ronald C Wek
Journal:  Mol Cell Biol       Date:  2004-02       Impact factor: 4.272

10.  The eIF2α serine 51 phosphorylation-ATF4 arm promotes HIPPO signaling and cell death under oxidative stress.

Authors:  Kamindla Rajesh; Jothilatha Krishnamoorthy; Jyotsana Gupta; Urszula Kazimierczak; Andreas I Papadakis; Zhilin Deng; Shuo Wang; Shinji Kuninaka; Antonis E Koromilas
Journal:  Oncotarget       Date:  2016-08-09
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  6 in total

1.  Application of NanoBiT for Monitoring Dimerization of the Null Hong Kong Variant of α-1-Antitrypsin, NHK, in Living Cells.

Authors:  Junpei Norisada; Keito Fujimura; Fumimasa Amaya; Hiroki Kohno; Yoko Hirata; Kentaro Oh-Hashi
Journal:  Mol Biotechnol       Date:  2018-08       Impact factor: 2.695

2.  Expression analysis and functional characterization of thioredoxin domain-containing protein 11.

Authors:  Ryoichi Murase; Ayumi Yamamoto; Yoko Hirata; Kentaro Oh-Hashi
Journal:  Mol Biol Rep       Date:  2022-09-24       Impact factor: 2.742

3.  Elucidating post-translational regulation of mouse CREB3 in Neuro2a cells.

Authors:  Kentaro Oh-Hashi; Ayano Soga; Yoshihisa Naruse; Kanto Takahashi; Kazutoshi Kiuchi; Yoko Hirata
Journal:  Mol Cell Biochem       Date:  2018-02-17       Impact factor: 3.396

4.  Characterization of IRE1α in Neuro2a cells by pharmacological and CRISPR/Cas9 approaches.

Authors:  Kentaro Oh-Hashi; Hiroki Kohno; Mahmoud Kandeel; Yoko Hirata
Journal:  Mol Cell Biochem       Date:  2019-12-13       Impact factor: 3.396

5.  Expression analysis and functional characterization of the mouse cysteine-rich with EGF-like domains 2.

Authors:  Kentaro Oh-Hashi; Keito Fujimura; Junpei Norisada; Yoko Hirata
Journal:  Sci Rep       Date:  2018-08-15       Impact factor: 4.379

6.  Comparative Analysis of CREB3 and CREB3L2 Protein Expression in HEK293 Cells.

Authors:  Kentaro Oh-Hashi; Ayumi Yamamoto; Ryoichi Murase; Yoko Hirata
Journal:  Int J Mol Sci       Date:  2021-03-09       Impact factor: 5.923

  6 in total

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