Literature DB >> 28822280

Promiscuity, impersonation and accommodation: evolution of plant specialized metabolism.

Bryan J Leong1, Robert L Last2.   

Abstract

Specialized metabolic enzymes and metabolite diversity evolve through a variety of mechanisms including promiscuity, changes in substrate specificity, modifications of gene expression and gene duplication. For example, gene duplication and substrate binding site changes led to the evolution of the glucosinolate biosynthetic enzyme, AtIPMDH1, from a Leu biosynthetic enzyme. BAHD acyltransferases illustrate how enzymatic promiscuity leads to metabolite diversity. The examples 4-coumarate:CoA ligase and aromatic acid methyltransferases illustrate how promiscuity can potentiate the evolution of these specialized metabolic enzymes.
Copyright © 2017 Elsevier Ltd. All rights reserved.

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Year:  2017        PMID： 28822280      PMCID： PMC5723210          DOI： 10.1016/j.sbi.2017.07.005

Source DB:  PubMed          Journal:  Curr Opin Struct Biol        ISSN： 0959-440X            Impact factor:   6.809


  41 in total

1.  The Protein Data Bank.

Authors:  H M Berman; J Westbrook; Z Feng; G Gilliland; T N Bhat; H Weissig; I N Shindyalov; P E Bourne
Journal:  Nucleic Acids Res       Date:  2000-01-01       Impact factor: 16.971

Review 2.  Plant defense against herbivores: chemical aspects.

Authors:  Axel Mithöfer; Wilhelm Boland
Journal:  Annu Rev Plant Biol       Date:  2012-02-09       Impact factor: 26.379

Review 3.  Something Old, Something New: Conserved Enzymes and the Evolution of Novelty in Plant Specialized Metabolism.

Authors:  Gaurav D Moghe; Robert L Last
Journal:  Plant Physiol       Date:  2015-08-14       Impact factor: 8.340

Review 4.  The rise of chemodiversity in plants.

Authors:  Jing-Ke Weng; Ryan N Philippe; Joseph P Noel
Journal:  Science       Date:  2012-06-29       Impact factor: 47.728

5.  Purification, cloning, and properties of an acyltransferase controlling shikimate and quinate ester intermediates in phenylpropanoid metabolism.

Authors:  Laurent Hoffmann; Stephane Maury; Francoise Martz; Pierrette Geoffroy; Michel Legrand
Journal:  J Biol Chem       Date:  2002-10-14       Impact factor: 5.157

6.  Functionally divergent alleles and duplicated Loci encoding an acyltransferase contribute to acylsugar metabolite diversity in Solanum trichomes.

Authors:  Anthony L Schilmiller; Gaurav D Moghe; Pengxiang Fan; Banibrata Ghosh; Jing Ning; A Daniel Jones; Robert L Last
Journal:  Plant Cell       Date:  2015-04-10       Impact factor: 11.277

7.  Three 4-coumarate:coenzyme A ligases in Arabidopsis thaliana represent two evolutionarily divergent classes in angiosperms.

Authors:  J Ehlting; D Büttner; Q Wang; C J Douglas; I E Somssich; E Kombrink
Journal:  Plant J       Date:  1999-07       Impact factor: 6.417

8.  Structural, biochemical, and phylogenetic analyses suggest that indole-3-acetic acid methyltransferase is an evolutionarily ancient member of the SABATH family.

Authors:  Nan Zhao; Jean-Luc Ferrer; Jeannine Ross; Ju Guan; Yue Yang; Eran Pichersky; Joseph P Noel; Feng Chen
Journal:  Plant Physiol       Date:  2007-12-27       Impact factor: 8.340

9.  The 4-coumarate:CoA ligase gene family in Arabidopsis thaliana comprises one rare, sinapate-activating and three commonly occurring isoenzymes.

Authors:  Björn Hamberger; Klaus Hahlbrock
Journal:  Proc Natl Acad Sci U S A       Date:  2004-02-09       Impact factor: 11.205

10.  Exploiting the Substrate Promiscuity of Hydroxycinnamoyl-CoA:Shikimate Hydroxycinnamoyl Transferase to Reduce Lignin.

Authors:  Aymerick Eudes; Jose H Pereira; Sasha Yogiswara; George Wang; Veronica Teixeira Benites; Edward E K Baidoo; Taek Soon Lee; Paul D Adams; Jay D Keasling; Dominique Loqué
Journal:  Plant Cell Physiol       Date:  2016-02-08       Impact factor: 4.927
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  13 in total

1.  Evolutionary repurposing of a sulfatase: A new Michaelis complex leads to efficient transition state charge offset.

Authors:  Charlotte M Miton; Stefanie Jonas; Gerhard Fischer; Fernanda Duarte; Mark F Mohamed; Bert van Loo; Bálint Kintses; Shina C L Kamerlin; Nobuhiko Tokuriki; Marko Hyvönen; Florian Hollfelder
Journal:  Proc Natl Acad Sci U S A       Date:  2018-07-16       Impact factor: 11.205

2.  Separate Pathways Contribute to the Herbivore-Induced Formation of 2-Phenylethanol in Poplar.

Authors:  Jan Günther; Nathalie D Lackus; Axel Schmidt; Meret Huber; Heike-Jana Stödtler; Michael Reichelt; Jonathan Gershenzon; Tobias G Köllner
Journal:  Plant Physiol       Date:  2019-03-07       Impact factor: 8.340

3.  Evolutionary routes to biochemical innovation revealed by integrative analysis of a plant-defense related specialized metabolic pathway.

Authors:  Gaurav D Moghe; Bryan J Leong; Steven M Hurney; A Daniel Jones; Robert L Last
Journal:  Elife       Date:  2017-08-30       Impact factor: 8.140

Review 4.  Fruity, sticky, stinky, spicy, bitter, addictive, and deadly: evolutionary signatures of metabolic complexity in the Solanaceae.

Authors:  Paul D Fiesel; Hannah M Parks; Robert L Last; Cornelius S Barry
Journal:  Nat Prod Rep       Date:  2022-07-20       Impact factor: 15.111

5.  Conserved Molecular Mechanism of TyrA Dehydrogenase Substrate Specificity Underlying Alternative Tyrosine Biosynthetic Pathways in Plants and Microbes.

Authors:  Craig A Schenck; Yusen Men; Hiroshi A Maeda
Journal:  Front Mol Biosci       Date:  2017-11-07

6.  Evolution of a plant gene cluster in Solanaceae and emergence of metabolic diversity.

Authors:  Pengxiang Fan; Peipei Wang; Yann-Ru Lou; Bryan J Leong; Bethany M Moore; Craig A Schenck; Rachel Combs; Pengfei Cao; Federica Brandizzi; Shin-Han Shiu; Robert L Last
Journal:  Elife       Date:  2020-07-02       Impact factor: 8.140

7.  Evolution of l-DOPA 4,5-dioxygenase activity allows for recurrent specialisation to betalain pigmentation in Caryophyllales.

Authors:  Hester Sheehan; Tao Feng; Nathanael Walker-Hale; Samuel Lopez-Nieves; Boas Pucker; Rui Guo; Won C Yim; Roshani Badgami; Alfonso Timoneda; Lijun Zhao; Helene Tiley; Dario Copetti; Michael J Sanderson; John C Cushman; Michael J Moore; Stephen A Smith; Samuel F Brockington
Journal:  New Phytol       Date:  2019-09-29       Impact factor: 10.151

8.  Convergent evolution of a metabolic switch between aphid and caterpillar resistance in cereals.

Authors:  B Li; C Förster; C A M Robert; T Züst; L Hu; R A R Machado; J-D Berset; V Handrick; T Knauer; G Hensel; W Chen; J Kumlehn; P Yang; B Keller; J Gershenzon; G Jander; T G Köllner; M Erb
Journal:  Sci Adv       Date:  2018-12-05       Impact factor: 14.136

9.  Evolution of metabolic novelty: A trichome-expressed invertase creates specialized metabolic diversity in wild tomato.

Authors:  Bryan J Leong; Daniel B Lybrand; Yann-Ru Lou; Pengxiang Fan; Anthony L Schilmiller; Robert L Last
Journal:  Sci Adv       Date:  2019-04-24       Impact factor: 14.136

10.  Structural diversification during glucosinolate breakdown: mechanisms of thiocyanate, epithionitrile and simple nitrile formation.

Authors:  Daniela Eisenschmidt-Bönn; Nicola Schneegans; Anita Backenköhler; Ute Wittstock; Wolfgang Brandt
Journal:  Plant J       Date:  2019-04-29       Impact factor: 6.417
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