Literature DB >> 28819001

Epigenomics and human adaptation to high altitude.

Colleen G Julian1.   

Abstract

Over the past decade, major technological and analytical advancements have propelled efforts toward identifying the molecular mechanisms that govern human adaptation to high altitude. Despite remarkable progress with respect to the identification of adaptive genomic signals that are strongly associated with the "hypoxia-tolerant" physiological characteristics of high-altitude populations, many questions regarding the fundamental biological processes underlying human adaptation remain unanswered. Vital to address these enduring questions will be determining the role of epigenetic processes, or non-sequence-based features of the genome, that are not only critical for the regulation of transcriptional responses to hypoxia but heritable across generations. This review proposes that epigenomic processes are involved in shaping patterns of adaptation to high altitude by influencing adaptive potential and phenotypic variability under conditions of limited oxygen supply. Improved understanding of the interaction between genetic, epigenetic, and environmental factors holds great promise to provide deeper insight into the mechanisms underlying human adaptive potential, and clarify its implications for biomedical research.
Copyright © 2017 the American Physiological Society.

Entities:  

Keywords:  DNA methylation; adaptation; epigenetics; high altitude; hypoxia

Mesh:

Substances:

Year:  2017        PMID: 28819001      PMCID: PMC6157641          DOI: 10.1152/japplphysiol.00351.2017

Source DB:  PubMed          Journal:  J Appl Physiol (1985)        ISSN: 0161-7567


  109 in total

Review 1.  Phenotypic plasticity and the epigenetics of human disease.

Authors:  Andrew P Feinberg
Journal:  Nature       Date:  2007-05-24       Impact factor: 49.962

2.  Comprehensive high-throughput arrays for relative methylation (CHARM).

Authors:  Rafael A Irizarry; Christine Ladd-Acosta; Benilton Carvalho; Hao Wu; Sheri A Brandenburg; Jeffrey A Jeddeloh; Bo Wen; Andrew P Feinberg
Journal:  Genome Res       Date:  2008-03-03       Impact factor: 9.043

3.  Different hematologic responses to hypoxia in Sherpas and Quechua Indians.

Authors:  R M Winslow; K W Chapman; C C Gibson; M Samaja; C C Monge; E Goldwasser; M Sherpa; F D Blume; R Santolaya
Journal:  J Appl Physiol (1985)       Date:  1989-04

4.  [An epidemiological study on high altitude disease at Qinghai-Xizang (Tibet) plateau].

Authors:  T Y Wu
Journal:  Zhonghua Liu Xing Bing Xue Za Zhi       Date:  1987-04

Review 5.  Hypoxia and environmental epigenetics.

Authors:  Carolyn J Brown; James L Rupert
Journal:  High Alt Med Biol       Date:  2014-09-03       Impact factor: 1.981

6.  Targeting of HIF-alpha to the von Hippel-Lindau ubiquitylation complex by O2-regulated prolyl hydroxylation.

Authors:  P Jaakkola; D R Mole; Y M Tian; M I Wilson; J Gielbert; S J Gaskell; A von Kriegsheim; H F Hebestreit; M Mukherji; C J Schofield; P H Maxwell; C W Pugh; P J Ratcliffe
Journal:  Science       Date:  2001-04-05       Impact factor: 47.728

7.  TALE-mediated epigenetic suppression of CDKN2A increases replication in human fibroblasts.

Authors:  Diana L Bernstein; John E Le Lay; Elena G Ruano; Klaus H Kaestner
Journal:  J Clin Invest       Date:  2015-04-13       Impact factor: 14.808

8.  Epigenetic regulation of hypoxic sensing disrupts cardiorespiratory homeostasis.

Authors:  Jayasri Nanduri; Vladislav Makarenko; Vaddi Damodara Reddy; Guoxiang Yuan; Anita Pawar; Ning Wang; Shakil A Khan; Xin Zhang; Brian Kinsman; Ying-Jie Peng; Ganesh K Kumar; Aaron P Fox; Lucy A Godley; Gregg L Semenza; Nanduri R Prabhakar
Journal:  Proc Natl Acad Sci U S A       Date:  2012-01-09       Impact factor: 11.205

9.  Comprehensive methylome map of lineage commitment from haematopoietic progenitors.

Authors:  Hong Ji; Lauren I R Ehrlich; Jun Seita; Peter Murakami; Akiko Doi; Paul Lindau; Hwajin Lee; Martin J Aryee; Rafael A Irizarry; Kitai Kim; Derrick J Rossi; Matthew A Inlay; Thomas Serwold; Holger Karsunky; Lena Ho; George Q Daley; Irving L Weissman; Andrew P Feinberg
Journal:  Nature       Date:  2010-08-15       Impact factor: 49.962

10.  Genetic adaptation to high altitude in the Ethiopian highlands.

Authors:  Laura B Scheinfeldt; Sameer Soi; Simon Thompson; Alessia Ranciaro; Dawit Woldemeskel; William Beggs; Charla Lambert; Joseph P Jarvis; Dawit Abate; Gurja Belay; Sarah A Tishkoff
Journal:  Genome Biol       Date:  2012-01-20       Impact factor: 13.583

View more
  20 in total

1.  LINE-1 and EPAS1 DNA methylation associations with high-altitude exposure.

Authors:  Ainash Childebayeva; Tamara R Jones; Jaclyn M Goodrich; Fabiola Leon-Velarde; Maria Rivera-Chira; Melisa Kiyamu; Tom D Brutsaert; Dana C Dolinoy; Abigail W Bigham
Journal:  Epigenetics       Date:  2019-01-09       Impact factor: 4.528

Review 2.  High-Altitude Erythrocytosis: Mechanisms of Adaptive and Maladaptive Responses.

Authors:  Francisco C Villafuerte; Tatum S Simonson; Daniela Bermudez; Fabiola León-Velarde
Journal:  Physiology (Bethesda)       Date:  2022-01-10

Review 3.  Role of Epigenetics in the Regulation of Immune Functions of the Skin.

Authors:  Yu Sawada; Richard L Gallo
Journal:  J Invest Dermatol       Date:  2020-11-27       Impact factor: 8.551

4.  Genetic variants at the EGLN1 locus associated with high-altitude adaptation in Tibetans are absent or found at low frequency in highland Andeans.

Authors:  Erica C Heinrich; Lu Wu; Elijah S Lawrence; Amy M Cole; Cecilia Anza-Ramirez; Francisco C Villafuerte; Tatum S Simonson
Journal:  Ann Hum Genet       Date:  2019-02-04       Impact factor: 2.180

Review 5.  Human Genetic Adaptation to High Altitude: Evidence from the Andes.

Authors:  Colleen G Julian; Lorna G Moore
Journal:  Genes (Basel)       Date:  2019-02-15       Impact factor: 4.096

Review 6.  Vascular homeostasis at high-altitude: role of genetic variants and transcription factors.

Authors:  Neha Chanana; Tsering Palmo; John H Newman; M A Qadar Pasha
Journal:  Pulm Circ       Date:  2020-11-19       Impact factor: 3.017

7.  Targeting the Mild-Hypoxia Driving Force for Metabolic and Muscle Transcriptional Reprogramming of Gilthead Sea Bream (Sparus aurata) Juveniles.

Authors:  Fernando Naya-Català; Juan A Martos-Sitcha; Verónica de Las Heras; Paula Simó-Mirabet; Josep À Calduch-Giner; Jaume Pérez-Sánchez
Journal:  Biology (Basel)       Date:  2021-05-08

8.  Gene network analysis to determine the effect of hypoxia-associated genes on brain damages and tumorigenesis using an avian model.

Authors:  Hamed Kharrati-Koopaee; Esmaeil Ebrahimie; Mohammad Dadpasand; Ali Niazi; Rugang Tian; Ali Esmailizadeh
Journal:  J Genet Eng Biotechnol       Date:  2021-07-08

9.  Multi-institutional experience of genetic diagnosis in Ecuador: National registry of chromosome alterations and polymorphisms.

Authors:  César Paz-Y-Miño; Verónica Yumiceba; Germania Moreta; Rosario Paredes; Mónica Ruiz; Ligia Ocampo; Arianne Llamos Paneque; Catalina Ochoa Pérez; Juan Carlos Ruiz-Cabezas; Jenny Álvarez Vidal; Idarmis Jiménez Torres; Ramón Vargas-Vera; Fernando Cruz; Víctor Hugo Guapi N; Martha Montalván; Sara Meneses Álvarez; Maribel Garzón Castro; Elizabeth Lamar Segura; María Augusta Recalde Báez; María Elena Naranjo; Nina Tambaco Jijón; María Sinche; Pedro Licuy; Ramiro Burgos; Fabián Porras-Borja; Gabriela Echeverría-Garcés; Andy Pérez-Villa; Isaac Armendáriz-Castillo; Jennyfer M García-Cárdenas; Santiago Guerrero; Patricia Guevara-Ramírez; Andrés López-Cortés; Ana Karina Zambrano; Paola E Leone
Journal:  Mol Genet Genomic Med       Date:  2019-12-12       Impact factor: 2.183

Review 10.  An Aptitude for Altitude: Are Epigenomic Processes Involved?

Authors:  Colleen G Julian
Journal:  Front Physiol       Date:  2019-11-22       Impact factor: 4.566

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.