Literature DB >> 28816657

A Dynamic Regression Approach for Frequency-Domain Partial Coherence and Causality Analysis of Functional Brain Networks.

Lipeng Ning, Yogesh Rathi.   

Abstract

Coherence and causality measures are often used to analyze the influence of one region on another during analysis of functional brain networks. The analysis methods usually involve a regression problem, where the signal of interest is decomposed into a mixture of regressor and a residual signal. In this paper, we revisit this basic problem and present solutions that provide the minimal-entropy residuals for different types of regression filters, such as causal, instantaneously causal, and noncausal filters. Using optimal prediction theory, we derive several novel frequency-domain expressions for partial coherence, causality, and conditional causality analysis. In particular, our solution provides a more accurate estimation of the frequency-domain causality compared with the classical Geweke causality measure. Using synthetic examples and in vivo resting-state functional magnetic resonance imaging data from the human connectome project, we show that the proposed solution is more accurate at revealing frequency-domain linear dependence among high-dimensional signals.

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Year:  2017        PMID: 28816657      PMCID: PMC6260816          DOI: 10.1109/TMI.2017.2739740

Source DB:  PubMed          Journal:  IEEE Trans Med Imaging        ISSN: 0278-0062            Impact factor:   10.048


  24 in total

1.  Granger causality and transfer entropy are equivalent for Gaussian variables.

Authors:  Lionel Barnett; Adam B Barrett; Anil K Seth
Journal:  Phys Rev Lett       Date:  2009-12-04       Impact factor: 9.161

2.  Frequency decomposition of conditional Granger causality and application to multivariate neural field potential data.

Authors:  Yonghong Chen; Steven L Bressler; Mingzhou Ding
Journal:  J Neurosci Methods       Date:  2005-08-15       Impact factor: 2.390

3.  Topographical functional connectivity pattern in the perisylvian language networks.

Authors:  Hua-Dong Xiang; Hubert M Fonteijn; David G Norris; Peter Hagoort
Journal:  Cereb Cortex       Date:  2009-06-22       Impact factor: 5.357

4.  Behaviour of Granger causality under filtering: theoretical invariance and practical application.

Authors:  Lionel Barnett; Anil K Seth
Journal:  J Neurosci Methods       Date:  2011-08-12       Impact factor: 2.390

5.  Intrinsic functional connectivity as a tool for human connectomics: theory, properties, and optimization.

Authors:  Koene R A Van Dijk; Trey Hedden; Archana Venkataraman; Karleyton C Evans; Sara W Lazar; Randy L Buckner
Journal:  J Neurophysiol       Date:  2009-11-04       Impact factor: 2.714

6.  Partial correlation investigation on the default mode network involved in acupuncture: an fMRI study.

Authors:  Peng Liu; Yi Zhang; Guangyu Zhou; Kai Yuan; Wei Qin; Lu Zhuo; Jimin Liang; Peng Chen; Jianping Dai; Yijun Liu; Jie Tian
Journal:  Neurosci Lett       Date:  2009-07-10       Impact factor: 3.046

7.  Estimation of functional connectivity in fMRI data using stability selection-based sparse partial correlation with elastic net penalty.

Authors:  Srikanth Ryali; Tianwen Chen; Kaustubh Supekar; Vinod Menon
Journal:  Neuroimage       Date:  2011-12-01       Impact factor: 6.556

8.  Assessing and compensating for zero-lag correlation effects in time-lagged Granger causality analysis of FMRI.

Authors:  Gopikrishna Deshpande; K Sathian; Xiaoping Hu
Journal:  IEEE Trans Biomed Eng       Date:  2010-06       Impact factor: 4.538

Review 9.  The WU-Minn Human Connectome Project: an overview.

Authors:  David C Van Essen; Stephen M Smith; Deanna M Barch; Timothy E J Behrens; Essa Yacoub; Kamil Ugurbil
Journal:  Neuroimage       Date:  2013-05-16       Impact factor: 6.556

10.  How reliable are MEG resting-state connectivity metrics?

Authors:  G L Colclough; M W Woolrich; P K Tewarie; M J Brookes; A J Quinn; S M Smith
Journal:  Neuroimage       Date:  2016-06-01       Impact factor: 6.556

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  2 in total

1.  Smooth interpolation of covariance matrices and brain network estimation: Part II.

Authors:  Lipeng Ning
Journal:  IEEE Trans Automat Contr       Date:  2019-07-04       Impact factor: 5.792

2.  Smooth Interpolation of Covariance Matrices and Brain Network Estimation.

Authors:  Lipeng Ning
Journal:  IEEE Trans Automat Contr       Date:  2018-11-05       Impact factor: 5.792

  2 in total

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