Literature DB >> 28816581

Novel functions for chromatin dynamics in mRNA biogenesis beyond transcription.

Catherine Dargemont1, Anna Babour1.   

Abstract

The first step of gene expression results in the production of mRNA ribonucleoparticles (mRNPs) that are exported to the cytoplasm via the NPC for translation into the cytoplasm. During this process, the mRNA molecule synthesized by RNA polymerase II (Pol II) undergoes extensive maturation, folding and packaging events that are intimately coupled to its synthesis. All these events take place in a chromatin context and it is therefore not surprising that a growing number of studies recently reported specific contributions of chromatin dynamics to various steps of mRNP biogenesis. In this extra view, we replace our recent findings highlighting the contribution of the yeast chromatin remodeling complex ISW1 to nuclear mRNA quality control in the context of the recent literature.

Entities:  

Keywords:  ISW1; chromatin dynamics; mRNA biogenesis; mRNA quality control

Mesh:

Substances:

Year:  2017        PMID: 28816581      PMCID: PMC5703233          DOI: 10.1080/19491034.2017.1342916

Source DB:  PubMed          Journal:  Nucleus        ISSN: 1949-1034            Impact factor:   4.197


  49 in total

1.  The human SWI/SNF subunit Brm is a regulator of alternative splicing.

Authors:  Eric Batsché; Moshe Yaniv; Christian Muchardt
Journal:  Nat Struct Mol Biol       Date:  2005-12-11       Impact factor: 15.369

2.  Recognition of trimethylated histone H3 lysine 4 facilitates the recruitment of transcription postinitiation factors and pre-mRNA splicing.

Authors:  Robert J Sims; Scott Millhouse; Chi-Fu Chen; Brian A Lewis; Hediye Erdjument-Bromage; Paul Tempst; James L Manley; Danny Reinberg
Journal:  Mol Cell       Date:  2007-11-30       Impact factor: 17.970

3.  Dynamic histone acetylation is critical for cotranscriptional spliceosome assembly and spliceosomal rearrangements.

Authors:  Felizza Q Gunderson; Evan C Merkhofer; Tracy L Johnson
Journal:  Proc Natl Acad Sci U S A       Date:  2011-01-18       Impact factor: 11.205

Review 4.  ISWI chromatin remodeling: one primary actor or a coordinated effort?

Authors:  Blaine Bartholomew
Journal:  Curr Opin Struct Biol       Date:  2014-02-19       Impact factor: 6.809

5.  The specificity and topology of chromatin interaction pathways in yeast.

Authors:  Tineke L Lenstra; Joris J Benschop; Taesoo Kim; Julia M Schulze; Nathalie A C H Brabers; Thanasis Margaritis; Loes A L van de Pasch; Sebastiaan A A C van Heesch; Mariel O Brok; Marian J A Groot Koerkamp; Cheuk W Ko; Dik van Leenen; Katrin Sameith; Sander R van Hooff; Philip Lijnzaad; Patrick Kemmeren; Thomas Hentrich; Michael S Kobor; Stephen Buratowski; Frank C P Holstege
Journal:  Mol Cell       Date:  2011-05-20       Impact factor: 17.970

6.  Insights into RNA biology from an atlas of mammalian mRNA-binding proteins.

Authors:  Alfredo Castello; Bernd Fischer; Katrin Eichelbaum; Rastislav Horos; Benedikt M Beckmann; Claudia Strein; Norman E Davey; David T Humphreys; Thomas Preiss; Lars M Steinmetz; Jeroen Krijgsveld; Matthias W Hentze
Journal:  Cell       Date:  2012-05-31       Impact factor: 41.582

7.  Biased chromatin signatures around polyadenylation sites and exons.

Authors:  Noah Spies; Cydney B Nielsen; Richard A Padgett; Christopher B Burge
Journal:  Mol Cell       Date:  2009-10-23       Impact factor: 17.970

8.  A role for Snf2-related nucleosome-spacing enzymes in genome-wide nucleosome organization.

Authors:  Triantaffyllos Gkikopoulos; Pieta Schofield; Vijender Singh; Marina Pinskaya; Jane Mellor; Michaela Smolle; Jerry L Workman; Geoffrey J Barton; Tom Owen-Hughes
Journal:  Science       Date:  2011-09-23       Impact factor: 47.728

9.  The yeast SR-like protein Npl3 links chromatin modification to mRNA processing.

Authors:  Erica A Moehle; Colm J Ryan; Nevan J Krogan; Tracy L Kress; Christine Guthrie
Journal:  PLoS Genet       Date:  2012-11-29       Impact factor: 5.917

10.  Global analysis of yeast mRNPs.

Authors:  Sarah F Mitchell; Saumya Jain; Meipei She; Roy Parker
Journal:  Nat Struct Mol Biol       Date:  2012-12-09       Impact factor: 15.369

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