Literature DB >> 28812691

A macroecological theory of microbial biodiversity.

William R Shoemaker1, Kenneth J Locey1, Jay T Lennon1.   

Abstract

Microorganisms are the most abundant, diverse and functionally important organisms on Earth. Over the past decade, microbial ecologists have produced the largest ever community datasets. However, these data are rarely used to uncover law-like patterns of commonness and rarity, test theories of biodiversity, or explore unifying explanations for the structure of microbial communities. Using a global scale compilation of >20,000 samples from environmental, engineered and host-related ecosystems, we test the power of competing theories to predict distributions of microbial abundance and diversity-abundance scaling laws. We show that these patterns are best explained by the synergistic interaction of stochastic processes that are captured by lognormal dynamics. We demonstrate that lognormal dynamics have predictive power across scales of abundance, a criterion that is essential to biodiversity theory. By understanding the multiplicative and stochastic nature of ecological processes, scientists can better understand the structure and dynamics of Earth's largest and most diverse ecological systems.

Year:  2017        PMID: 28812691     DOI: 10.1038/s41559-017-0107

Source DB:  PubMed          Journal:  Nat Ecol Evol        ISSN: 2397-334X            Impact factor:   15.460


  20 in total

1.  Metagenomics survey unravels diversity of biogas microbiomes with potential to enhance productivity in Kenya.

Authors:  Samuel Mwangangi Muturi; Lucy Wangui Muthui; Paul Mwangi Njogu; Justus Mong'are Onguso; Francis Nyamu Wachira; Stephen Obol Opiyo; Roger Pelle
Journal:  PLoS One       Date:  2021-01-04       Impact factor: 3.240

2.  Global diversity and biogeography of bacterial communities in wastewater treatment plants.

Authors:  Linwei Wu; Daliang Ning; Bing Zhang; Yong Li; Ping Zhang; Xiaoyu Shan; Qiuting Zhang; Mathew Robert Brown; Zhenxin Li; Joy D Van Nostrand; Fangqiong Ling; Naijia Xiao; Ya Zhang; Julia Vierheilig; George F Wells; Yunfeng Yang; Ye Deng; Qichao Tu; Aijie Wang; Tong Zhang; Zhili He; Jurg Keller; Per H Nielsen; Pedro J J Alvarez; Craig S Criddle; Michael Wagner; James M Tiedje; Qiang He; Thomas P Curtis; David A Stahl; Lisa Alvarez-Cohen; Bruce E Rittmann; Xianghua Wen; Jizhong Zhou
Journal:  Nat Microbiol       Date:  2019-05-13       Impact factor: 17.745

3.  Macroecological dynamics of gut microbiota.

Authors:  Brian W Ji; Ravi U Sheth; Purushottam D Dixit; Konstantine Tchourine; Dennis Vitkup
Journal:  Nat Microbiol       Date:  2020-04-13       Impact factor: 17.745

4.  Toward a methodical framework for comprehensively assessing forest multifunctionality.

Authors:  Stefan Trogisch; Andreas Schuldt; Jürgen Bauhus; Juliet A Blum; Sabine Both; François Buscot; Nadia Castro-Izaguirre; Douglas Chesters; Walter Durka; David Eichenberg; Alexandra Erfmeier; Markus Fischer; Christian Geißler; Markus S Germany; Philipp Goebes; Jessica Gutknecht; Christoph Zacharias Hahn; Sylvia Haider; Werner Härdtle; Jin-Sheng He; Andy Hector; Lydia Hönig; Yuanyuan Huang; Alexandra-Maria Klein; Peter Kühn; Matthias Kunz; Katrin N Leppert; Ying Li; Xiaojuan Liu; Pascal A Niklaus; Zhiqin Pei; Katherina A Pietsch; Ricarda Prinz; Tobias Proß; Michael Scherer-Lorenzen; Karsten Schmidt; Thomas Scholten; Steffen Seitz; Zhengshan Song; Michael Staab; Goddert von Oheimb; Christina Weißbecker; Erik Welk; Christian Wirth; Tesfaye Wubet; Bo Yang; Xuefei Yang; Chao-Dong Zhu; Bernhard Schmid; Keping Ma; Helge Bruelheide
Journal:  Ecol Evol       Date:  2017-11-06       Impact factor: 3.167

5.  How, When, and Where Relic DNA Affects Microbial Diversity.

Authors:  J T Lennon; M E Muscarella; S A Placella; B K Lehmkuhl
Journal:  MBio       Date:  2018-06-19       Impact factor: 7.867

Review 6.  Impact of hydrologic boundaries on microbial planktonic and biofilm communities in shallow terrestrial subsurface environments.

Authors:  H J Smith; A J Zelaya; K B De León; R Chakraborty; D A Elias; T C Hazen; A P Arkin; A B Cunningham; M W Fields
Journal:  FEMS Microbiol Ecol       Date:  2018-12-01       Impact factor: 4.194

7.  A census-based estimate of Earth's bacterial and archaeal diversity.

Authors:  Stilianos Louca; Florent Mazel; Michael Doebeli; Laura Wegener Parfrey
Journal:  PLoS Biol       Date:  2019-02-04       Impact factor: 8.029

Review 8.  A Developing Symbiosis: Enabling Cross-Talk Between Ecologists and Microbiome Scientists.

Authors:  Laura Tipton; John L Darcy; Nicole A Hynson
Journal:  Front Microbiol       Date:  2019-02-20       Impact factor: 5.640

9.  Asexual Reproduction Can Account for the High Diversity and Prevalence of Rare Taxa Observed in Microbial Communities.

Authors:  Cristina M Herren
Journal:  Appl Environ Microbiol       Date:  2019-07-18       Impact factor: 4.792

10.  Blind spots in global soil biodiversity and ecosystem function research.

Authors:  Carlos A Guerra; Anna Heintz-Buschart; Johannes Sikorski; Antonis Chatzinotas; Nathaly Guerrero-Ramírez; Simone Cesarz; Léa Beaumelle; Matthias C Rillig; Fernando T Maestre; Manuel Delgado-Baquerizo; François Buscot; Jörg Overmann; Guillaume Patoine; Helen R P Phillips; Marten Winter; Tesfaye Wubet; Kirsten Küsel; Richard D Bardgett; Erin K Cameron; Don Cowan; Tine Grebenc; César Marín; Alberto Orgiazzi; Brajesh K Singh; Diana H Wall; Nico Eisenhauer
Journal:  Nat Commun       Date:  2020-08-03       Impact factor: 14.919

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