Literature DB >> 28812589

Connecting Earth observation to high-throughput biodiversity data.

Alex Bush1,2,3, Rahel Sollmann4, Andreas Wilting5, Kristine Bohmann6,7, Beth Cole8, Heiko Balzter8,9, Christopher Martius10, András Zlinszky11, Sébastien Calvignac-Spencer12, Christina A Cobbold13, Terence P Dawson14, Brent C Emerson15,7, Simon Ferrier3, M Thomas P Gilbert6,16, Martin Herold17, Laurence Jones18, Fabian H Leendertz12, Louise Matthews13, James D A Millington14, John R Olson19, Otso Ovaskainen20,21, Dave Raffaelli22, Richard Reeve13, Mark-Oliver Rödel23, Torrey W Rodgers24, Stewart Snape25, Ingrid Visseren-Hamakers26, Alfried P Vogler27,28, Piran C L White22, Martin J Wooster14,29, Douglas W Yu1,7.   

Abstract

Understandably, given the fast pace of biodiversity loss, there is much interest in using Earth observation technology to track biodiversity, ecosystem functions and ecosystem services. However, because most biodiversity is invisible to Earth observation, indicators based on Earth observation could be misleading and reduce the effectiveness of nature conservation and even unintentionally decrease conservation effort. We describe an approach that combines automated recording devices, high-throughput DNA sequencing and modern ecological modelling to extract much more of the information available in Earth observation data. This approach is achievable now, offering efficient and near-real-time monitoring of management impacts on biodiversity and its functions and services.

Year:  2017        PMID: 28812589     DOI: 10.1038/s41559-017-0176

Source DB:  PubMed          Journal:  Nat Ecol Evol        ISSN: 2397-334X            Impact factor:   15.460


  18 in total

1.  Toward global integration of biodiversity big data: a harmonized metabarcode data generation module for terrestrial arthropods.

Authors:  Paula Arribas; Carmelo Andújar; Kristine Bohmann; Jeremy R deWaard; Evan P Economo; Vasco Elbrecht; Stefan Geisen; Marta Goberna; Henrik Krehenwinkel; Vojtech Novotny; Lucie Zinger; Thomas J Creedy; Emmanouil Meramveliotakis; Víctor Noguerales; Isaac Overcast; Hélène Morlon; Anna Papadopoulou; Alfried P Vogler; Brent C Emerson
Journal:  Gigascience       Date:  2022-07-19       Impact factor: 7.658

2.  Message in a Bottle-Metabarcoding enables biodiversity comparisons across ecoregions.

Authors:  D Steinke; S L deWaard; J E Sones; N V Ivanova; S W J Prosser; K Perez; T W A Braukmann; M Milton; E V Zakharov; J R deWaard; S Ratnasingham; P D N Hebert
Journal:  Gigascience       Date:  2022-04-28       Impact factor: 7.658

3.  APPLES: Scalable Distance-Based Phylogenetic Placement with or without Alignments.

Authors:  Metin Balaban; Shahab Sarmashghi; Siavash Mirarab
Journal:  Syst Biol       Date:  2020-05-01       Impact factor: 15.683

4.  Landscape analyses using eDNA metabarcoding and Earth observation predict community biodiversity in California.

Authors:  Meixi Lin; Ariel Levi Simons; Ryan J Harrigan; Emily E Curd; Fabian D Schneider; Dannise V Ruiz-Ramos; Zack Gold; Melisa G Osborne; Sabrina Shirazi; Teia M Schweizer; Tiara N Moore; Emma A Fox; Rachel Turba; Ana E Garcia-Vedrenne; Sarah K Helman; Kelsi Rutledge; Maura Palacios Mejia; Onny Marwayana; Miroslava N Munguia Ramos; Regina Wetzer; N Dean Pentcheff; Emily Jane McTavish; Michael N Dawson; Beth Shapiro; Robert K Wayne; Rachel S Meyer
Journal:  Ecol Appl       Date:  2021-07-08       Impact factor: 6.105

5.  An efficient and robust laboratory workflow and tetrapod database for larger scale environmental DNA studies.

Authors:  Jan Axtner; Alex Crampton-Platt; Lisa A Hörig; Azlan Mohamed; Charles C Y Xu; Douglas W Yu; Andreas Wilting
Journal:  Gigascience       Date:  2019-04-01       Impact factor: 6.524

6.  Non-invasive faecal sampling reveals spatial organization and improves measures of genetic diversity for the conservation assessment of territorial species: Caucasian lynx as a case species.

Authors:  Deniz Mengüllüoğlu; Jörns Fickel; Heribert Hofer; Daniel W Förster
Journal:  PLoS One       Date:  2019-05-10       Impact factor: 3.240

7.  Environmental DNA metabarcoding of wild flowers reveals diverse communities of terrestrial arthropods.

Authors:  Philip Francis Thomsen; Eva E Sigsgaard
Journal:  Ecol Evol       Date:  2019-02-07       Impact factor: 2.912

8.  Global distribution and diversity of Chaetoceros (Bacillariophyta, Mediophyceae): integration of classical and novel strategies.

Authors:  Daniele De Luca; Wiebe H C F Kooistra; Diana Sarno; Chetan C Gaonkar; Roberta Piredda
Journal:  PeerJ       Date:  2019-08-19       Impact factor: 2.984

9.  ORCA-SPOT: An Automatic Killer Whale Sound Detection Toolkit Using Deep Learning.

Authors:  Christian Bergler; Hendrik Schröter; Rachael Xi Cheng; Volker Barth; Michael Weber; Elmar Nöth; Heribert Hofer; Andreas Maier
Journal:  Sci Rep       Date:  2019-07-29       Impact factor: 4.379

10.  COI metabarcoding primer choice affects richness and recovery of indicator taxa in freshwater systems.

Authors:  Mehrdad Hajibabaei; Teresita M Porter; Michael Wright; Josip Rudar
Journal:  PLoS One       Date:  2019-09-12       Impact factor: 3.240

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.