Literature DB >> 28809830

Overexpression and Purification of Human Cis-prenyltransferase in Escherichia coli.

Ilan Edri1, Michal Goldenberg1, Michal Lisnyansky2, Roi Strulovich2, Hadas Newman3, Anat Loewenstein3, Daniel Khananshvili2, Moshe Giladi4, Yoni Haitin5.   

Abstract

Prenyltransferases (PT) are a group of enzymes that catalyze chain elongation of allylic diphosphate using isopentenyl diphosphate (IPP) via multiple condensation reactions. DHDDS (dehydrodolichyl diphosphate synthase) is a eukaryotic long-chain cis-PT (forming cis double bonds from the condensation reaction) that catalyzes chain elongation of farnesyl diphosphate (FPP, an allylic diphosphate) via multiple condensations with isopentenyl diphosphate (IPP). DHDDS is of biomedical importance, as a non-conservative mutation (K42E) in the enzyme results in retinitis pigmentosa, ultimately leading to blindness. Therefore, the present protocol was developed in order to acquire large quantities of purified DHDDS, suitable for mechanistic studies. Here, the usage of protein fusion, optimized culture conditions and codon-optimization were used to allow the overexpression and purification of functionally active human DHDDS in E. coli. The described protocol is simple, cost-effective and time sparing. The homology of cis-PT among different species suggests that this protocol may be applied for other eukaryotic cis-PT as well, such as those involved in natural rubber synthesis.

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Year:  2017        PMID: 28809830      PMCID: PMC5614002          DOI: 10.3791/56430

Source DB:  PubMed          Journal:  J Vis Exp        ISSN: 1940-087X            Impact factor:   1.355


  22 in total

1.  Process-scale disruption of microorganisms.

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2.  A vision for the future of genomics research.

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Authors:  Kariona A Grabińska; Eon Joo Park; William C Sessa
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4.  Crystal structures of undecaprenyl pyrophosphate synthase in complex with magnesium, isopentenyl pyrophosphate, and farnesyl thiopyrophosphate: roles of the metal ion and conserved residues in catalysis.

Authors:  Rey-Ting Guo; Tzu-Ping Ko; Annie P-C Chen; Chih-Jung Kuo; Andrew H-J Wang; Po-Huang Liang
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5.  A missense mutation in DHDDS, encoding dehydrodolichyl diphosphate synthase, is associated with autosomal-recessive retinitis pigmentosa in Ashkenazi Jews.

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Journal:  Am J Hum Genet       Date:  2011-02-03       Impact factor: 11.025

6.  Whole-exome sequencing links a variant in DHDDS to retinitis pigmentosa.

Authors:  Stephan Züchner; Julia Dallman; Rong Wen; Gary Beecham; Adam Naj; Amjad Farooq; Martin A Kohli; Patrice L Whitehead; William Hulme; Ioanna Konidari; Yvonne J K Edwards; Guiqing Cai; Inga Peter; David Seo; Joseph D Buxbaum; Jonathan L Haines; Susan Blanton; Juan Young; Eduardo Alfonso; Jeffery M Vance; Byron L Lam; Margaret A Peričak-Vance
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Review 7.  Polyprenyl diphosphate synthases.

Authors:  K Ogura; T Koyama; H Sagami
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Review 8.  Understanding human glycosylation disorders: biochemistry leads the charge.

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Journal:  J Biol Chem       Date:  2013-01-17       Impact factor: 5.157

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10.  Catalytic mechanism revealed by the crystal structure of undecaprenyl pyrophosphate synthase in complex with sulfate, magnesium, and triton.

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  2 in total

1.  Structural basis for long-chain isoprenoid synthesis by cis-prenyltransferases.

Authors:  Moshe Giladi; Michal Lisnyansky Bar-El; Pavla Vaňková; Alisa Ferofontov; Emelia Melvin; Suha Alkaderi; Daniel Kavan; Boris Redko; Elvira Haimov; Reuven Wiener; Petr Man; Yoni Haitin
Journal:  Sci Adv       Date:  2022-05-18       Impact factor: 14.957

2.  Structural Characterization of Full-Length Human Dehydrodolichyl Diphosphate Synthase Using an Integrative Computational and Experimental Approach.

Authors:  Michal Lisnyansky Bar-El; Su Youn Lee; Ah Young Ki; Noa Kapelushnik; Anat Loewenstein; Ka Young Chung; Dina Schneidman-Duhovny; Moshe Giladi; Hadas Newman; Yoni Haitin
Journal:  Biomolecules       Date:  2019-10-28
  2 in total

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